Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->YAB1                                                                                <---------ICU4                                                                                --------->YAB1                                                                                -------->ATHB1                 --------->ANAC58                                              --------->AHL20(1)            --------->ZAT18                                                    --------->ICU4     --------->TOE2(3)                                                         <---------AHL20(2)   <---------TOE2(2)                                                           --------->AHL20(2)   <---------TOE1(2)                                                           <---------YAB1  ==========================HOX2a_HOX2a                                  ------>MYB83<---------YAB1  ------>ZmHOX2a(1)     --------->At4g35610                              ------>MYB46(1)<---------YAB1 --------->TOE2(2)    <-----------RAV1(2)                               ----------->RAV1(1)<--------- --------->TOE1(2)   <------ZmHOX2a(2)                             <---------ZAT18<---------YAB1 ----->KAN4(2)   --------->ANAC58                               --------->At4g35610<---------ICU4 -ANAC46    <---------ZAT18        --------->TOE2(3)<----------DOF2--------->ZAT18--------->ICU4   attcctacgtttattgcacaaggatcagaagaaactttcttaaatagccatcttctttttcttctcttctgcaccaacaaaattattattattctttaac  18324100                                                                                                  ---                                                                                            <--------                                                                                         <---------AHL20(1)                             <---------GLK1(1)                                           --------->AHL20(1)                   --------->AHL20(2)                                                    --------->ARR11(3)                   --------->YAB1                                                        <---------ARR11(3)                --------->YAB1                               --------->YAB1             <---------AHL20(2)  <---------AHL20(2)     ----------->GT1                <----------DOF2          ----------->GT1 ---- -DOF2       --------->TOE2(3)                          <---------DAG2           <---------YAB1  <---   aaaatttatagatttcattaataaaaaatgtaaatcccaaaatttccaagttttaagactttatcaaaaatcaggttttcatgctgataaatattttttc  18324200                                 --------->ARR11(3)                                            ------    ----------->GT1              --------->AHL20(1)                                        <---------YAB1 ------->DOF2               <---------ANAC46                                           <---------TOE2(3) -AHL20(2)  --------->AHL20(2)   <---------ARR11(3)                                  --------->AHL20(2) ----------->AGL15      <---------ANAC58    --------->GLK1(2)         <---------AHL20(2) --------->YAB1 ------------AGL15      <---------ANAC58   <---------GLK1(2)       ------->TEIL      <---------AHL20(2)   taaagtaagaaaaaaaaaatgtgttttcttggggatatattgaaggaatcttacatgtaaatgctgatgtattttatatagtatgaattaatgaagatta  18324300                                    <------MYB83                                    <------MYB46(1)                                   <---------AtMYB61                                 <-------GAMYB                                <---------MYB46(3)                <---------ZAT6  --------->MYB52(2)                              <---------ETT(2)              <---------ANAC58  --------->MYB55(2)                              --------->ETT(2)              <---------ANAC46<-----------HVH21                            <---------ANAC58      ----------->GT1   <---------ZAT14        ---------->ID1              <---------ANAC58     --------->DAG2  <---------ANAC46 <---------REM1(1)                <---------MYB52(1)       -----   ---------->DOF2 <---------ZAT14<---------MYB52(1)                  <-------GAMYB             <---- --->AHL20(2) <---------ANAC58<---------MYB52(1)  ------>ZmHOX2a(1)  <---------MYB46(3)--------->AHL20(2)   aaaaaaaaaggtaattgagtgtgaagtataccggtcgttggtgtagttcgtcctctacttcttcgacgaggtcgttgtcttgtcgacgatttattcttct  18324400                                         ----------->HVH21                                       <---------ANAC46     <---------DEAR3(2)               --------             ------>NtERF2        --------->RAP2.6(3)       <---------MYB46(3)      ------->TEIL             --------->LBD16     --------->MYB52(1)        <---------DEAR3(1)       -------->P            <---------DEAR3(1)--------->YAB1              <---------MYB52(1)     <------ZmHOX2a(2)           <---------LBD16    --------->TOE2(3)    <---------At4g35610       <------ZmHOX2a(2)    <-----------GT1------>ZmHOX2a(2)  <---------DEAR3(1)<---------ANAC58    <---------ARR11(3) ---->HSFB2a(2)   <------ZmHOX2a(2) ------->GAMYB  --------->At4g35610 <---------ATHB12      <------- -----HSFB2a(2)  <---------ARR14(2)--------->MYB46(3)   <---------ANAC58    --------->ARR11(3) <-----   agggattaacttctccggcgatcggaaaacattcttaacggccgtgaaccatgagcttccgtcggttttccccatcaagatcgatcaacctcgtctgctt  18324500                                <---------AHL20(2)                                --------->AHL20(2)                     <---------ANAC55(2)                     --------->ANAC55(2)                     --------->ANAC58                     --------->ANAC46                     --------->ANAC58                   --------->ARR14(1)                   --------->CCA1(2)        <------------CBF      <-----------TBP                                                       <      <---------YAB1<-------TEIL<-----------TBP                                                    <-  ------->TEIL    --------->ARR11(1)             ----------->GT1                                 ---- ->At4g35610      --------->ARR14(2)         <------------CBF                                 ------- --At4g35610      <---------ARR14(2) --------->AHL20(2)                  <---------ALFIN1     ------- -----DOF2      <---------------AtSPL8<---------AHL20(2)      ---------->DOF2   <----------DOF2 <----   aatgtatgttaattgtataagatacgaaacttatttatataaaatggaattgagttatataagttaaaggaacacacactctcttttatggagaacaaga  18324600                                                                                   --------->AHL20(2)                                                                                 --------->ANAC58       <-----------GT1    --------->DAG2           ------->TEIL                  --------->ANAC58 ----------DOF2          ---------->DOF2       ------->TEIL                      ----------->GT1 --------DAG2         --------->AHL20(2)      <---------AtLEC2                 <--------P --->TEIL             <---------AHL20(2)     <-------TEIL            <------------CBF -->ANAC58        <---------AHL20(2)        --------->AtLEC2 <---------ICU4  ----------->GT1 -->ANAC58        --------->AHL20(2)     <-------TEIL    <---------YAB1      --------->YAB1      ---- -----ARR11(3)   --------->AHL20(2)      ------->TEIL   <-----------GT1 ------------>CBF<-------TEIL   acctttttgttaccctatatttaattaaaaagttgggaacatgtacatgcatgtatattttcatttttgcatattgcaatggtaagtaaattcattaaga  18324700                                                                                                  ---                                                                                        <------------                                                                                        -------------          --------->HSFB2a(1)                                                          <-------------          --------->HSFC1(2)          <---------YAB1                                   <-------------          <---------HSFC1(2) ------>ZmHOX2a(2)<---------AHL20(2)                       ==============      --------->ANAC46   <---------YAB1 <------------CBF                               <------------- ------->GT1   <----------DOF2  <---------TOE1(2)             ------->TEIL  <---------YAB1        ---   agtgaaactcgaaactcctttctaagtatgatcgtatgtgttcattgttttatttgatagtatgaacgtttcttagttatttttgtatttctacaattgg  18324800    --------->ARR14(2) ------->GAMYB                      <----------DOF2    ---------->DOF2 ------>ANAC58        --------->MYB46(3)                  --------------->AGL15   <----------ID1 ---AGL15            --------->RAP2.6(3)       <---------YAB1           --------->YAB1 -->AGL15           --------->MYB52(1)       --------->YAB1           ------------------------>ANAC81 ----AGL3          ----------->HVH21         <---------ICU4          --------->DAG2 ----AGL1        <---------ANAC55(2)        <---------ATHB12        ---------->DOF2 =========================================================================MADS_MADS<------ZmHOX2a(1) ----AGL2    <-----------HVH21            --------->WOX13(1)  <---------AtLEC2    ----------->GT1 ------>ANAC58   --------->ANAC55(2)    <------ZmHOX2a(2) <---------------AGL15  ----------->GT1  >>>   aagcaaaatatgcattgtcatgtaacggccaaatgcaaaacgatcaatcatcatacaatgctttgtatggaaaagcataaaaagaggaaaaatgttggaa  18324900                                                                                 <------MYB46(1)                                                                                 <------MYB83                                                                                --------->MYB59                                                                                --------->MYB46(2)                                                                               <--------P                                                                             <------MYB83                                                                             <------MYB46(1)                                                                            --------->MYB46(2)                                                                            --------->MYB111(1)                                                                        <---------YAB1                                                                       --------->AHL20(1)                                                                       <---------AHL20(2)       <---------ICU4           --------->YAB1                         <---------AHL20(1)       --------->YAB1      --------->AHL20(2)     ----------->GT1      --------->AHL20(2)      --------->ICU4       <---------AHL20(2)   ---------->DOF2       --------->AHL20(2)    --------->YAB1         --------->AHL20(1) --------->ARR11(3)      --------->YAB1 >>>>>>>>>TBF1        --------->AHL20(2)  ---------->DOF2         <------ZmHOX2a(1)     <----------DOF2 >>>>>>TBF1    --------->RAP2.6(2)      >>>>>>>>>GATA-1     ---------->DOF2 --------->MYB59   gaagaagaataatgaagccgaaaatcaaataaaatagtaatagataaagataaagaaaaatgaaaagaggaattatattaggtaggcatgctttgtgttt  18325000  Previous    Next  AGI:  At3g49380.1    Description:  IQD15 (IQ-domain 15); calmodulin binding. similar to IQD17 (IQ-domain 17), calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G00820.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76669.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 18322894    to: 18324475    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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