Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  ==============HOX2a_HOX2a                                =================================HOX2a_HOX2a                                ====================================HOX2a_HOX2a                                ------>ZmHOX2a(2)                               ==================================HOX2a_HOX2a                               =====================================HOX2a_HOX2a                               ===============HOX2a_HOX2a                               <------ZmHOX2a(2)                              --------->ARR14(2)                              <---------ARR14(2)    --------->MYB46(3)  --------->ARR14(2)          >>>>>>>>>TBF1  ----------->RAV1(1)   <---------ARR14(2)  --------->ICU4 ------->ANAC58         ------->TEIL        <---------YAB1           <---------ICU4               --- ------->ANAC46<---------At4g35610        --------->YAB1     <------ZmHOX2a(1)    <------ZmHOX2a(1) ------->ANAC58--------->At4g35610     <------ZmHOX2a(1)  <------ZmHOX2a(1)     <---------TOE2(3) <--   gaagcaacaacgaagagagcagaacgtatttggatccacgaggatgatgatgaagaagaaggaggagacgataatggcgatgaaggattagaagacgaag  18310800                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                <---------ATHB12-----                                                 <-----------GT1              ------>MYB83    <------        --------->ARR14(2)                  >>>>>>>>>RAP2.2                   ------>MYB46(1) -------        <---------ARR14(2)                  --------->TOE2(3)               --------->TOE2(3) <------ ------>O2            <----------DOF2------>ZmHOX2a(1)          ------>ZmHOX2a(1)            -------- -------O2       ---------->DOF2    <---------MYB59        ------>ZmHOX2a(1)<---------MYB59<---------   acgtcgtttgaatccgtctcaaagctttcatctatgttcctaacaatctaaaaacctcttcctctcctcagattaaaacctaatcaaacgatttcaccaa  18310900                                               <------NtERF2                                             <---------ATERF1(2)                                             --------->RRTF1(3)                                             --------->DEAR3(1)                                             --------->RAP2.3(3)                                             --------->RAP2.3(2) <---------ATHB12                            --------->ATERF1(2) ------ATHB12                                --------->RRTF1(2) ------MYB55(2)                              --------->RAP2.6(2) ----->MYB46(3)                             --------->ERF1 ---->ANAC58                                --------->RRTF1(1) ---->ANAC58                                --------->RAP2.3(1) --->P                                     --------->LBD16 ->MYB83                                   ------>NtERF2 --->MYB55(1)                             --------->ANAC46 -->DEAR3(1)                             --------->MYB46(3)                               --------->ANAC58 -->AtMYB61                            --------->ARR14(2)     <---------ETT(1)            --------->ANAC58 ---MYB55(2)                           <---------ARR14(2)     --------->ANAC46  ----------->HVH21 ---MYB46(2)                          --------->GLK1(1)   <----------DOF2     --------->LBD16 ->MYB46(1)                           <---------GLK1(1)<---------AHL20(2)    --------->DEAR3(1) ---MYB111(2)                        ----------->ARR10 <-----------GT1      <---------LBD16      ---- -->MYB46(3)                     --------->LBD16    --------->YAB1  --------->DEAR3(1) <------ZmHOX2a(2) ---MYB111(1)                   <---------DEAR3(1)--------->ICU4  ------>NtERF2<------NtERF2    ----- ->MYB46(3)                    <---------LBD16------>NtERF2   ----------->HVH21--------->ATERF1(1) --GT1                       <-----------HVH21<---------RAP2.6(3)<---------ALFIN1      <---------ATHB12   ccaataacttgaactagacgataacttcaaatgtccggcgatatccgccgtcaatattaactttccgacaccgtcttcgccggagaccgatcaagaaaat  18311000                                                                                                =====                        <-----------HVH21                                                       <----                       --------->O2                                                             <----                       --------->TGA1a                                                         <-----                      ------>NtERF2                                                            <-----                      --------->LBD16                                                        <-------                     <---------ANAC58                               <---------ANAC58     <----------DOF2                  ------>ZmHOX2a(1)                             <---------ANAC58         ============                ----------->RAV1(2)                     <---------ANAC58          <---------ANAC58                --------->At4g35610                     <---------ANAC58 <<<<<<<<<TBF1   <---------DAG2            <---------ARR11(3)                      <---------ANAC58<------------------------ANAC81            --------->ARR11(3)                <---------ALFIN1  <---------ANAC58  <---------ANAC58    ----------->GT1  <---------ANAC58      --------->REM1(1)<---------ANAC58      <---------ANAC46 ----->YAB1--------->CCA1(1)               --------->ANAC46 <---------ANAC58   <---------MYB52(1) ------>GT1--------->RVE1(1)        <<<<<<<<<TBF1   <---------ANAC58<---------ANAC58--------->DOF5.7(2)   gaaaatttgaaaaaaatctcctgccgcgtctggtcttcttcttctacaccacttgcttccttgcttccttgcttcttcttcgtttcgtttactttttgct  18311100                                <---------ANAC58                         <---------ZAT18                         --------->ZAT18                        --------->ALFIN1                     <-------MYC3                     ------->MYC3                    --------->O2<---------ANAC58                    <---------ANAC46                    --------->TGA1a                             <---------ICU4                    <---------ANAC55(1)                      --------->TOE2(3)   <----------DOF2  <---------TGA1a                          --------->YAB1   ===========================bZIP_DOF                     --------->GLK1(2) =============================bZIP_DOF                     <---------ARR14(2) -----DAG2          <---------ANAC58                       --------->ARR14(2) ------DOF2         <---------ANAC58                       <---------ARR11(3) ----ANAC58         ===========================================bZIP_DOF ----ANAC58         <---------O2<---------ANAC46    <----------DOF2       *TSS ----GT1---------->ID1--------->ALFIN1     <-----------GT1 <-----------ARR10 =============================bZIP_DOF   <-----------GT1  <---------GLK1(2)    ---------->DOF2      -   tttctcttttgtctctgtagaaacgtgtgggcttacttgtaattttctctatctctttgagaatcttaatgaccaaaaaaaaaaagtcttcagagaaaaa  18311200                                                                                               <-----                                                                                        --------->LBD16                                                                                      <---------LBD16                  <----------DOF2                 --------->ZAT14        <---------AHL20(1)   <------                  <---------------AGL15          <----------DOF2         --------->AHL20(1)   -------        <---------ZAT14               --------->AHL20(2)              --------->YAB1<---------At5g28300   ----------->HVH21               --------->TOE1(3)              --------->ZAT6   <-----------GT1--- <---------MYB46(3)                --------->TOE2(3)     ------>ZmHOX2a(1)    <---------AHL20(2) <--- -------->ALFIN1 <-----------------AGL3     <-----------GT1    <----------DOF2--------->AHL20(2) <---   tggtggtgactggagagaggcttttaatggtgagaaaccttaaaatttacactttagtcctgtttctttcactaatatttttaatttaccccgatagata  18311300                                                                                                  <--  <---------AHL20(2)                                                                          <------ ----CCA1(1)                                      <---------AHL20(2)                        --------- ---ARR11(3)                                 --------->GLK1(2)                              <-------- -->ARR11(3)                          ----------->HVH21                         --------->ANAC55(2) ------>AHL20(2)                   ------->TEIL <----------DOF2         <-----------GT1     --------- ------YAB1                       <---------CCA1(2)                <---------AHL20(2) --------->YAB1 ------AHL20(2)      <---------AHL20(2)     <---------GLK1(2)--------->ANAC55(2)<---------ANAC55(2)   ttatttagttgtttcagacttatatttttagtcattgtatctcaccgattcttttattgttttaagtatttttttgaccattacataatcagaattattt  18311400    <---------------AGL15    --------------->AGL15   ----------------->AGL1   <-----------------AGL2                                                                    --------   ----------------->AGL2                                                                  <---------ZAT18 ---------RAV1(1)       <---------ICU4     <---------AHL20(2)                              --------->ZAT14 ---YAB1               --------->ICU4  <---------AHL20(2)                       --------->AHL20(2) >AHL20(2)           --------->YAB1    --------->AHL20(2)                       <---------AHL20(2) -AHL20(2)        ----------->GT1     <---------AHL20(2)             <---------ICU4        <---------ZAT14 >ATHB51   ----------->GT1   ------->TEIL  --------->AHL20(2)  --------->AHL20(2)  <---------YAB1   ttgttgcgaaatatggtaatttgtaataatgtatttgttatttattttattcagttagaagaaaatttaaaacattgcaaaatttataaatagtgtagtc  18311500                                                                                                    <                           ------>ZmHOX2a(1)                                                    <----                          --------->TOE2(3)                                                     -----                    <-----------GT1                                                             <----                    <---------AHL20(2)                                                          -----                 <---------ICU4                                                                 -----                --------->AHL20(2)                                                             ------               <---------AHL20(1)                             <---------AHL20(2)             <-------               --------->AHL20(1)                          <---------AHL20(2)                --------               <---------AHL20(2)             --------->ANAC55(2)                           ---------            --------->AHL20(2)      <---------TOE2(2)     --------->AHL20(2)      ---------->DOF2   < --->GT1   <---------AHL20(2)       <---------TOE1(2)     <---------AHL20(2)<---------ANAC46<--------   aaaatttagtgatttaaaatatttacttccttatttcgcatgttatttatgtattagctattaattagttgtttttttgtgtgaaaaagagctattaatt  18311600  ---------->ID1 ---------MYB46(3) -----ICU4 ---->ATHB51 -----AHL20(2)    <----------DOF2                                                  <-----------GT1 ---->AHL20(2)    <---------------AGL15                                       --------->LBD16 ---->ATHB12      --------------->AGL15                                      --------->ANAC55(2) --->ICU4     <----------DOF2                                                <---------ANAC55(2) --ICU4 --------->ARR14(2)                        ------->MYC3            --------->ARR14(2) ->YAB1 <---------ARR14(2)                        <-------MYC3     <---------GLK1(2) >AHL20(2) <-----------GT1             <-----------GT1             <---------ARR14(2)           ----- -----------RAV1(1)                   <-----------GT1    <-----------GT1  <---------ARR14(2)    ----- -AHL20(2) <---------AHL20(2)--------->AHL20(2)<---------ALFIN1    --------->ARR11(3)  --------->AtLEC2   atttgttgcatattttctttctttatcaagtttatatagtttaccctctccacatgttgttcccattcagattttgaatccgtattaacatgcagaccaa  18311700  Previous    Next  AGI:  At3g49350.1    Description:  RAB GTPase activator. similar to RabGAP/TBC domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G24390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48599.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) Range:  from: 18308391    to: 18311174    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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