Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------AHL20(2)       --------->AHL20(2)       --------->AHL20(1)       <---------AHL20(1)   <---------AHL20(2)   --------->AHL20(2)  --------->ICU4  <---------YAB1 ---------ICU4                   --------->MYB52(1) ------->ICU4                  <----------DOF2                                          ------>MYB46(1) --------YAB1                 <---------ANAC58                                          ------>MYB83 ---->HAHB4                   <---------ANAC58            ------->TEIL                --------->DEAR3(1) ----->YAB1               <------MYB83                 ------>ZmHOX2a(1)             --------->MYB46(3) ---->ICU4            <---------MYB46(3)     ------->GAMYB--------->ARR14(2)       <-----------GT1  > -----YAB1            <-----------RAV1(1)   --------->MYB46(3)           ----------->HVH21       <--- ------>GT1<-----------GT1<------MYB46(1) <-----------GT1<---------CCA1(2)      --------->ARR14(2)<--   gataattaataaattaccacattgttgttggtgcttaacggatgtaacagccccttcctgtatccaatccatgctctcaccggtttcaccaacgttttca  18305200                                                                     --------->LBD16                                                                    --------->O2                                                                    <---------ANAC46                                                                ------>MYB83                                                                ------>MYB46(1)                                                                --------->ZAT2                                                               --------->ANAC46                                                              --------->AtMYB61                                                              <---------MYB55(2)                                                              --------->MYB46(3)                                                              <---------ALFIN1                                                           --------->DEAR3(1)                                                           --------->AtMYB61                       --                                                          <------NtERF2                         <----                                                          --------->MYB46(3)                   <-----                                                         <---------ATERF1(1)                   <-----                                                        --------->PCF2                        <------             <---------MYB52(1)                        --------->ZAT18                        <------     --------->ANAC46                                --------->HSFB2a(2)                     <------- >>>>>>>>RAP2.2                      --------->GLK1(2) <---------ZAT18                      <-------- ------CCA1(2)               <---------MYB46(3)      <---------HSFB2a(2) ------->TEIL     ------>ZmHOX2a(1) ---------ARR10        --------->GLK1(2)  <-----------HVH21<---------ALFIN1               ===========   tatctaaacgataccgtttcatgagaatcagttgttgaaattctggtcataccttcgggcaccaccagccccgtgtacctcgccttaaattcctcgtcgg  18305300                                                                                                 ----                                                                                                 ----                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                             ------->TEIL                                                                                         <---------HSFB2a(2)                                                                                         --------->HSFB2a(2)       --------->ZAT14                                                                  ------>ZmHOX2a(2)  <------ZmHOX2a(2)                                                                    <------ZmHOX2a(2) --------->ARR10                                                                      --------->ARR14(3) -------HVH21                 ------->TEIL                                            <---------ARR11(3) ----DEAR3(2)             <---------------AtSPL3                                      --------->ARR11(3) ----MYB46(3)             ------->MYC3                                                <---------ARR14(3) ---DEAR3(1)              <-------MYC3                                                --------->ARR14(2) ---At1g77200   <---------DOF5.7(2)                                                   <---------ARR14(2) --------------WRI1      <---------ANAC46                                             <---------AGP1 ---HVH21     --------->DOF5.7(2)                                   <----------DOF2  --------->RVE1(1) ========HOX2a_HOX2a --------->MYB46(3)       --------->YAB1<---------ETT(2)      ---------->DOF2----   tgagatcagagaactcgttaacatccaacgtgtacgttttgttcgtattcatattgatgctctcgacaaactttaagttattcgtaaagatctcgaacct  18305400                          --------->ANAC58                                                 <---------O2                          --------->ANAC55(2)                                              --------->O2                          --------->ANAC46                                             ------>NtERF2                          --------->ANAC58                                             <------NtERF2                       <---------ZAT18                                                --------->ANAC58                       --------->ZAT14                                                --------->ANAC46 ---->P                <---------REM1(2)                                              --------->ANAC58 -->MYB83   --------->ARR14(2)                                                ---------->DOF2     --- ----MYB59 <---------GLK1(2)                                             --------->HSFC1(2)--------->ANAC58 ----MYB111(1)         <---------ZAT14                                   <---------HSFC1(2)--------->ANAC58 -->HSFB2a(1)          --------->ZAT18                                <---------At4g35610 ------>NtERF2 -->MYB46(1)--------->GLK1(2)                <-------TEIL        --------->ANAC46    --------->ZAT18   actcgttttctcagaatcgtctgagtacacgcgattgaatcgagacatccattgctcatgtttctctacggcagaagcttcaaagagcccgccacgagat  18305500             --------->HSFB2a(2)             <---------HSFB2a(2)             <---------HSFC1(1)             --------->HSFC1(1)            <---------LBD16          <---------ARR14(2)          --------->ARR11(3)          --------->ARR14(2)                                                                  <------     ------>ZmHOX2a(1)                                                                        <------   ----------->RAV1(2)                           <------ZmHOX2a(2)                       --------->ICU4 -------->HVH21       ---------->DOF2 ---------->DOF2                        ----------->GT1  -------   gtgactcctgaagttctggaactcaaaagaatggctagaagaaagaaaacgatcgaagtcatttgatactagagagaaaatgtaatatgaaatgtttagg  18305600                                                                               <---------ANAC46                                                                    --------->ARR14(2)                                                                    <---------ARR14(2)                                                                 <---------ANAC58                    --------->MYB52(1)    <----------DOF2        <---------ANAC46                 --------->ANAC58         <---------------AGL15  <---------ANAC58                 --------->ANAC58        ----------------->AGL3 <-------TEIL   <---------AtLEC2          <---------ANAC58          <---------DEAR3(1)      <---------------AtSPL3       <----------DOF2              --------->ALFIN1        --------->ALFIN1   <---------ANAC58 ---TOE1(3)   <------NtERF2      --------->DAG2         <---------ZAT14--------->ANAC46 <---------YAB1 ---TOE2(3)  ------>NtERF2   --------->YAB1         --------->GLK1(2)  --------->ANAC55(2) -->MYB59 <---------ANAC58  <---------YAB1--------------->AGL15<---------ANAC46<---------ANAC58   tttatatgactttggtgccaagaaacgactatgagaaggtggtgctatatagagtttctgaagtggtgcgtatacgtagttgcatgttttatgtttgaat  18305700                                                                           --------->MYB52(1)                                                                          ------->GAMYB                                                                         <---------MYB55(2)                                                            <---------ANAC55(2)                                                            --------->ANAC58              <---------PCF2                                               --------->ANAC58          <---------MYB111(1)                                               --------->ANAC58          --------->MYB46(3)                                               --------->ANAC55(1)       <---------MYB46(2)<---------TCP15(1)                                               --------->ANAC46          <---------MYB52(2)<---------TCP20                             <------------CBF<---------ALFIN1            <---------MYB111(2)<--------                 --------->YAB1             <---------REM1(2)  ---------->DOF2------------>CBF                <---------YAB1          <-----------GT1     --------->ANAC58 --------->ZAT6--------->PCF2   agtcagtctaacaaggttttgataatcgtctcattgctaatttttctacacgctatgaagtcaagtaaagggccaactaacacaattttgagggtcccat  18305800      --------->ARR14(2)                       ------>ZmHOX2a(2)      --------->ARR11(3)                     --------->ARR14(2)                 <---------AHL20(2)      <---------ARR11(3)                     <---------ARR14(2)                <---------AHL20(1)      <---------ARR14(2)              --------->ICU4  --------->ARR11(3)       <---------AHL20(2) --------->ZAT18                  --------->At5g28300 <---------ARR11(3)       --------->AHL20(2) <---------ZAT18                 ----------->GT1  ---------->DOF2              --------->AHL20(1)  <- ------------>CBF               --------->ZAT6<------ZmHOX2a(2)     --------->ARR11(3)   <---------MYB46(3) ---------AGL1                --------->MYB52(1) ------>ZmHOX2a(1)<---------TOE2(3)<---------LBD16 <-   tagcgcaatatctgcaaacgttttttggggtctaacagtaaatatgggatcctaaagatttcgaacttaagatttgtcaaatttattcggattgttgtgc  18305900                                                                ---------->DOF2                                                          <-----------GT1                                                       --------->YAB1                                 <----------DOF2       <---------ICU4             <---------MYB46(3)  <---------DAG2     --------->YAB1                                 <- --------TOE1(2)   --------->At4g35610           --------->GLK1(1)                            <------ --------TOE2(2)   <---------At4g35610<-----------GT1 <---------YAB1                     <---------GLK1(2)   ctaggtatttatcggagggtgagcttacacattaactttttttcttatcggaactcataataaccagaaagtctgaaactgatattctaaagattgttgt  18306000                                                                                            -------->HAHB4                                                                                            <--------                      <---------ARR14(2)                                                    ---------                      ------->TEIL                                                         <---------ATHB12                      --------->ARR14(2)                                     --------->ATHB51       -            <---------ZAT6   <-------GAMYB                                   <---------ICU4<---------YAB1 --------TOE2(3)     <---------CCA1(2)                                    --------->TOE2(3)--------->ICU4 ---REM1(1) ----------->GT1 <-----------RAV1(1)                 <-----------GT1<---------YAB1       -   agaggttttaagaagtgttaattgtatcttctgttgtcatatgttgatatgttttttttttttttttcacaagtttccataatttttggagaaatgatta  18306100  Previous    Next  AGI:  At3g49340.1    Description:  cysteine proteinase, putative. similar to cysteine proteinase, putative [Arabidopsis thaliana] (TAIR:AT2G27420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48074.1); similar to cysteine proteinase [Lotus japonicus] (GB:BAF56428.1); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201) Range:  from: 18304332    to: 18305562    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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