Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------At5g28300                   --------->ANAC58        <-------TEIL                   --------->ANAC58<---------ZAT14                   --------->ANAC46--------->ZAT18      --------->ANAC46                 <---------ALFIN1  --------->ZAT14      --------->ANAC58                <---------ZAT18<-----------GT1          --------->ANAC58     --------->AtLEC2--------->YAB1<---------ZAT18  <---------ALFIN1       <-----------GT1       <---   agagttgatgcaaaatcgcacactcaaaacaaattactgcacaaattcatagctacacacacaaaaattcaagaattttacataaaaatcaaactaaatt  18301300                      --------->AHL20(2)           <---------GLK1(2)        --------->HSFB2a(2)                                                                  --------      --------->HSFB2a(2)                                                                   ---------      <---------HSFB2a(2)                ---------->DOF2                         --------->At5g28300 --------GT1    ----------->GT1      ------->TEIL    <----------DOF2            ----------->GT1   aaccatttctcgagaatttcgaaaaaaaatccaaaattgaacccaaagaagggaactttgcacacagagaaactcaaatacagggtaaattgaacaaagg  18301400                                                                                                   --                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                            ---------                    --------->SPL7                                                         <---------HSFC1(2)                    <---------TOE1(2)                                  ---------->DOF2     --------->HSFB2a(1)         ------>ZmHOX2a(2)                                         --------->ANAC58        --------->HSFC1(2)        <---------GLK1(1)                                      --------->ANAC58            <---------KAN4(1)       --------->ARR11(3)                                      --------->ANAC58            --------->KAN4(1) ->MYB52(1)       <---------SPL7                  <----------ID1   --------->ANAC58        <---------HSFB2a(1) ->DOF2<---------ARR11(3)              --------->GLK1(2)  <------ZmHOX2a(1)  <-------TEIL <---------KAN4(2)   gtacctgatgatctctggttcggacgatttgagcatcggagaatctattggaacgacgaaggatgaagcaagctaaagcttcgtcgcagtggaatgttcc  18301500              ------->MYC3              <-------MYC3             <---------ANAC55(2)             --------->ANAC55(1)                                                         ------->GAMYB     --------->PCF2                                                                   ----------->RAV1(1)    --------->TCP15(1)           <---------LBD16                                 <---------At4g35610    <---------PCF2             <---------ZAT2                                    --------->At4g35610 ------->ATHB51                <---------STY1(2)                                <-----------RAV1(1) -----------AGL15              --------->STY1(2)                             --------->ARR14(2) ----------->AGL1 <---------ANAC58                                           --------->GLK1(2) ------------AGL1 <---------ANAC46--------->ANAC58                          --------->ARR14(2) ------------AGL2 <---------ANAC58--------->ANAC58                          <---------GLK1(2) >KAN4(2)  <---------ALFIN1    --------->ZAT2    <---------HSFB2a(1)        <---------ARR14(2)      <   attatgggtcccaacacgtttcgtagagaaactagctcggaagtttgaagaacgtttgagaaacagagaacgattccagattctgctgcaacagagacct  18301600                                                              <---------TOE2(2)                                                              <---------TOE1(2)                                                              --------->LBD16                                                             <---------ANAC58                                                         *TSS<------NtERF2                                                         <-----------HVH21                                                        --------->ANAC46                                                        --------->bZIP60(1)                                                        --------->bZIP60(2)                                                        <---------DEAR3(1)                                                        --------->O2                           <-----                                                        <---------O2 <---------TOE2(3)      <--------                                                        <---------TGA1a                    <---------DEAR3(2)                                                  --------->TOE1(2)  <---------TOE1(3)   <------NtERF2                                       <---------HSFB2a(2)   <---------ANAC46            <---------MYB52(1)                                       --------->HSFB2a(2)   <---------ANAC58           ------>NtERF2        <---------ICU4           <---------ARR11(3)     --------->TGA1a                 <-----------HVH21       <---------ATHB12          --------->ARR11(3)  ----------->HVH21                 --------->DEAR3(1) ---------WRKY18(1)        >>>>>>>>>TBF1 --------->REM1(1)  <---------LBD16       <-----------GT1 <--   cttgacccaaacatggctaagagagagaagaagaagctcttctacaactaaaccctcgacgtcgcgggtttaagcttgacattataacgccgtcgtttcg  18301700                                                                                      --------->AHL20(2)                                                                         ============================                          <---------SPL7                                 <-----------------AG       <                         <---------ANAC46                      <---------MYB52(1)     <---------AHL20(2)                        <------NtERF2                       <------NtERF2<-----------------AGL1     -  <----------DOF2      ------>NtERF2                      --------->ANAC46<---------------AGL15     - ----ANAC46           <---------DEAR3(1)                  --------->DEAR3(1)          --------->ATHB51 -MYB52(1)            --------->DEAR3(1)    ---------->DOF2------>NtERF2<-----------GT1   <---------AHL20(2) -------WRKY12        --------->ANAC46<----------DOF2     <---------DEAR3(1)         --------->ICU4 <   tcaactttgggatttgataaaacgacgccgtatgtgttttctttgtgaaagactaaaacgacgccgtttgaattttacatttttggaattattttcttag  18301800                                           <---------TOE2(3)                                     <---------------AGL15                                     --------------->AGL15                                     <---------MYB59                                    <-----------------AGL2                                    ----------------->AGL2                                    ----------------->AG                                    <-----------------AGL3                                    ----------------->AGL3                                    ----------------->AGL1                                    <-----------------AG                                    <-----------------AGL1                                   -------->P                                   ------>MYB46(1)                                 <---------MYB46(2)                                 <---------MYB111(1)                                 <---------MYB59                              <---------WRKY18(1)                             --------->WRKY38(1)      <---------YAB1         --------->WRKY12                                       --------->YAB1 <---------HSFC1(2)         <---------WOX13(1)         <---------ZAT14           --------->YAB1 --------->HSFB2a(1)       <-------GAMYB   <---------YAB1                       --------->ICU4 <---------HSFB2a(1)      <---------MYB46(3)  <--------P                        <---------ATHB12 --------->HSFC1(2)    <----------DOF2  <---------ARR14(2)                    --------->WOX13(1) =====================================================MADS_MADS             <---------YAB1 ---------ARR14(2)    ------>ZmHOX2a(2) --------->ARR14(2)          <---------MYB52(1) -------->ARR14(2)   <---------YAB1------>MYB83        --------->ZAT14 <------MYB46(1)      <-------- -------->GLK1(2)   <---------ARR11(3) ------>MYB46(1)<---------ALFIN1 <------MYB83<---------YAB1 ---------KAN4(2)   --------->ARR11(3) ------>MYB83  --------->ANAC46 --------->MYB59    --------->GLK1(2)   ggaatcttctaatagagttgatgatctttggttgacctaccaaatatggttgatcaccacactgaccacagtttggttatcaattatcaaaattctgttt  18301900                                                               --------->YAB1                                                           <---------YAB1                          ------>MYB83         <---------PCF2 <---------YAB1   <------ZmHOX2a(2) --------->YAB1           ------>MYB46(1)      --------->TCP15(1)            <------ZmHOX2a(1) -YAB1 ---------->DOF2------->TEIL         --------->TOE1(2)--------->YAB1<---------LBD16  --------->YAB1   atatcatattaaagtgatttcatgtaccaaatgtattgttttaatcgtgggaccttaagttataatcatagaaaactcaggatcaaatccaaatgacaat  18302000                       --------->ATHB12                       --------->ATHB51                       <---------ICU4                      <---------YAB1                      --------->ICU4                                    <---------YAB1                    --------->YAB1                                    -------->ATHB1               <---------GLK1(2)                                      <---------ICU4            <---------ATHB12                                         <---------ATHB51 <--------------          --------->MYB52(1)                                         <---------AHL20(2)          <---       >>>>>>>>>>>>>>>>>LFY                   <---------HSFB2a(2)    --------->ICU4   ---------------       <<<<<<<<<<<<<<<<<LFY                   --------->HSFB2a(2)    --------->AHL20(2)         -----  --------->YAB1   <---------YAB1            <---------LBD16--------->YAB1<-----------GT1     <------   acaacaataaaccaatggattatcataattgcataaacactctcacttctggataagtttgttcataacaaattattaacatgacaaaatagtactatta  18302100                                                                                                   --                                                                                                 ----       --------->ANAC58                                                                          ----       --------->ANAC46                                                    <------------CBF    ------       --------->ANAC58                                                   --------->ATHB12     <----- -AtSPL8                                                                  <---------ICU4    <-------- ------TOE2(3)                               ----------->GT1             <---------YAB1  ------>MYB83 >AtSPL8  ----------->RAV1(1)        ---------->DOF2           --------->ANAC58          ------>MYB46(1) ----->DOF2       <----------DOF2    --------->MYB52(1)        --------->ANAC46        --------->AtMYB61 ---YAB1 ------->GAMYB            >>>>>>>>>>MYB80              --------->ANAC58        ------->GAMYB   aagtaatgcaacccacattactttggaaagacttcaaaccaaaggaattgagaaatgtggtctataagcaataacatcattgtcttcaaccaaatcacca  18302200  Previous    Next  AGI:  At3g49320.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G41970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62930.1); contains InterPro domain Metal-dependent protein hydrolase (InterPro:IPR003226) Range:  from: 18299232    to: 18301657    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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