Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------YAB1                                                                               --------->YAB1                                                                               <---------ICU4                                                                              --------->ICU4                                                                              <---------YAB1                                                                            --------->ATHB51                                                                            <--------ATHB1                                                                            --------->YAB1                                                                            <---------ICU4                                                                            <--------HAHB4                                                                      --------->ANAC58                                                          ----------->GT1  <---------ATHB51                                                          <------MYB83--------->ANAC46    <-----------GT1                                       <------MYB46(1)  <---------ATHB12 ------>ANAC55(2)                                        --------->MYB46(2)--------->AHL20(2) -------ANAC55(2)                               <---------DAG2        --------->ANAC58 -------GT1  <----------DOF2                    <----------DOF2 <---------AHL20(2) --ICU4      <---------DAG2                  <-----------GT1    --------->AHL20(2)--------->YAB1 -DOF2 <---------ICU4                      --------->YAB1--------->MYB59   --------->ICU4       <----   acatattaacaattactttttggttcttaacaaaaaaaaaaacaatattactttttggtttggtaaaaaaatacccaataattatcatatgctaatttct  18288200                             <---------AHL20(2)                             --------->AHL20(2)                             <---------AHL20(1)                             --------->AHL20(1)                         <---------AHL20(2)                         --------->AHL20(2)                        --------->AHL20(2)                 <---------AHL20(2)                 --------->ATHB12                <---------YAB1                                                        <---------AHL20(2)             --------->AHL20(2)                                                      --------->AHL20(2)            --------->ARR11(3)                                                   <---------YAB1            <---------ARR11(3)           --------->AHL20(2)                   <----------DOF2    <---            <---------AHL20(1)--------->AHL20(2)                           <-----------GT1       <---     ----------->GT1    <---------AHL20(2)--------->AHL20(2)        --------->YAB1   <---------AHL20(2)    --------->ATHB12 --------->ATHB12    --------->YAB1       --------->ARR11(3) --------->AHL20(2) ------DOF2 --------->AHL20(1)<---------AHL20(2)<---------YAB1<---------ARR11(3) <---------AHL20(2)   ttcaaatgagtgaaaatatttattgattaaatttatttgtcaataaaaatatgagagaaactaaaatctatgaaaataaactttttattaaatgagattg  18288300                         --------->ALFIN1                       <---------DEAR3(2)                       <------MYB83                       <------MYB46(1)                      <---------MYB46(3)                      <---------DEAR3(1)                      <---------DEAR4(1)                                           --------->GLK1(2)                      <---------DREB2C(2)                                         --------->ARR14(2)            <------ZmHOX2a(1)                                                     <---------GLK1(2)          <---------TOE2(3)                                                    --------->HSFB2a(2)          <---------TOE1(3)     <-----------GT1                                <---------HSFB2a(2) ------ANAC58        <---------ORA47(1)                                      <-----------GT1     ---- ------ANAC58     <---------AtMYB61                              ----------->GT1  <---------ARR14(2)   cttaccttgtttaaggaattttggtcggtgtgagtaactccatggccttctctaaaccctacaaaaaatgtaaaactatttacagaacctgtttgaatat  18288400                            --------->ANAC58                            --------->AtLEC2                          <---------ICU4                          --------->YAB1                         <---------ATHB12           --------->AHL20(2)              <-----------GT1                  <---------MYB52(1)            <-----------GT1 --------->ANAC58  <----------DOF2              --------->GLK1(2)   <-----------GT1     --------->YAB1  --------->MYB46(3)         <-----------GT1 --------->AHL20(2) <----------DOF2  <-----------GT1<---------AHL20(2)  --------->ARR11(3)          < ----->AHL20(2) <---------ALFIN1  --------->YAB1  --------->ANAC55(2)   <---------ARR11(3)        ---   aaaataaacagttttttcacacctttaatcatgcaattgtaaccattcctttacttaattagatgtttaaacaagataatccatatacaaatatacaaat  18288500                                                           <---------YAB1                                                          <---------ARR11(3)                                                   --------->DEAR3(1)                                                   --------->DREB2C(2)       --------->LBD16                           --------->MYB52(1)      --------->ANAC46                         <---------ABI4(2)     --------->HSFB2a(2)            --------->ANAC58   <----------DOF2     <---------HSFB2a(2)        --------->ANAC58<---------ALFIN1   -------->P<<<<<<<<<<<<<<<<<LFY   --------->ANAC58   <---------DAG2  <-----------GT1               --------->ANAC58--------->AtMYB61 ---------WOX13(1)          --------->ANAC58   <---------MYB55(2)        <---------AHL20(2) <-------- ------>ATHB12              --------->ANAC58   --------->MYB46(3)---------->DOF2          *TSS   <---   tgatttacccgaagaacacaatggaaacagaagcaagaacgacatgagaaccaccggctttatctttgaaagcatttttttgtttgttttagttttgttg  18288600                                                                                   ------->MYC3                                                                           <------------CBF                                                ----------->GT1          <---------ARR11(3)                   <---------AHL20(2)       <---------AtMYB61           --------->YAB1                 <-----------TBP       --------->ANAC55(2)             <---------YAB1                 --------->AHL20(2)    <---------ANAC58               <---------TOE2(3)------->TEIL       --------->ANAC58                <---------ANAC46              --------->YAB1------->MYC2       --------->ANAC58                <---------ANAC55(2)         <---------WOX13(1)<-------TEIL       --------->ANAC46                <---------ANAC58  <-----------RAV1(1)       <-------MYC3 ---RAV1(1)      <---------AHL20(2)    <---------ANAC55(1)        <------------CBF <-------MYC2 ------ANAC46  <-----------TBP       <-----------GT1     --------->ALFIN1--------->ARR11(3)   tttggactcacgcttctatatatatatgtgtacatgtagttacgttttggtggaaaaatgtgttggcagattgatgatattgacacatgcatttcgcatt  18288700                                                                                                    <                                                                                                  <--                                                                                               ------                                                                                               ------                                                                                             <-------                                                                                         <------ZmHOX2a(2)                                <---------YAB1--------->YAB1                            <---------ARR11(3)                             --------->AHL20(2)                    --------->ICU4       --------->ARR11(3)                             <---------AHL20(2) <---------YAB1----------->GT1     --------->RVE1(1)--               --------->ARR11(3)       --------->YAB1 <---------------AGL15  --------->AHL20(2)<----               <---------ARR11(3)    <-----------GT1   ==============================================   tactacaattcaaactaaatcttttggcgattttatttttaaacatatttataattcatcaaattagtaattagtttccaaaaaatatcagatcatattt  18288800              --------->AHL20(2)           --------->YAB1           <--------ATHB1           -------->HAHB4           <---------ICU4           --------->ATHB51                                                                      ----           <--------HAHB4                                                                        ----          <---------YAB1                                                                         ----          --------->ICU4                                                                         <---          --------->AHL20(2)                                                                    <----      --------->ARR11(3)                                                                        -----      <---------ARR11(3)     --------->TOE1(2)                                                  <----    ----------->GT1      <------ZmHOX2a(1)                                                     <-----  ---------->DOF2 --------->AHL20(2)                  ----------->GT1                         ------- ---------AHL20(2)<---------AHL20(2)                  <----------ID1                 --------->AHL20(1) -------YAB1  <---------AHL20(1)                 --------->AHL20(2)                  --------->AHL20(2) --->ICU4 <---------ATHB51---------->DOF2     --------->ATHB12                       <---------AHL20(2) --->AHL20(2) <---------AHL20(2)             <---------YAB1                      <---------AHL20(2) < --ICU4 --------->YAB1 <---------TOE2(3)     --------->ICU4                --------->ATHB12 <-------- ------->AHL20(2)<---------------AGL15     --------->YAB1>>>>>>>>>>GT-3b  --------->ICU4    <-------- -----AHL20(2)--------->AHL20(1) <------ZmHOX2a(1)  ---------->DOF2     --------->YAB1   <---------YAB1 ================================MADS_MADS<---------AHL20(2)     --------->YAB1 --------->AHL20(2)  -   attaaaaagataataattaattaatgaggaaagtaggaaactatattatgattaaaaagaaaaatactcatgaagaatgattttaaattttttgattaat  18288900     <-------TEIL ---->HAHB4 ----->ATHB12 ----->YAB1 ------ICU4 -----YAB1 ---->ICU4 -----ATHB12                                             <---------At4g35610                    <---- ----TOE2(3)                      --------->At4g35610    --------->At4g35610           ------->TEIL -->YAB1                      --------->MYB52(2)--------->AHL20(2)                     --------->ARR14(2) ---------AHL20(2) <---------ARR11(3)           <---------AHL20(2)                     <---------ARR14(2) -YAB1             --------->ARR11(3)       <---------AHL20(2)                      <---------YAB1 -WOX13(1) ---------->DOF2  <--------P      --------->AHL20(2)                ------>MYB83 ------>ZmHOX2a(1) -------->AHL20(2) <---------GLK1(2)      --------->TOE2(3)<----------DOF2    ------>MYB46(1)   -----   gattaaatacattgaaagatagatttttgggttagtagatgaaacattaattaaaaatcagcttttgttgatgagaaaccaatcttatgaatcctccact  18289000                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                   <---------At4g35610                                                                                  <---------ATERF1(1)                                                                                  <---------RRTF1(1)                                                                                  <---------RAP2.3(1)                                                                                 <---------RAP2.3(2)                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                       ------>ZmHOX2a(1)                                                                     ==========================HOX2a_HOX2a                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)         -------                                                                    ===========================HOX2a_HOX2a                                                                   <---------ARR11(3)         -------    <---------ZAT2                                                 --------->ARR11(3)         -------    <------NtERF2                                                  <---------ARR14(2)   ------>ZmHOX2a(1)    <---------ZAT14                                               <------ZmHOX2a(1)--------->ATERF1(1)    --------->ZAT14                                        ----------->ARR10     <---------RRTF1(2)    --------->At4g35610                                 <---------ANAC46         <---------RAP2.3(3)    <---------At4g35610                                <---------At4g35610       <---------RAP2.6(2) --------->At4g35610                                   --------->At4g35610      <---------LBD16 -----STY1(1)                      ---------->DOF2<---------TOE2(3)--------->ARR14(2)------>NtERF2 ---->STY1(1)       <-------TEIL  <------ZmHOX2a(1)<-----------RAV1(1)--------->TOE2(3)<---------ALFIN1   aggggctgcagaggcagatagatgcatagtttgtaaggaaagaatgaggtctaatgttgctgagattaggatcctaagtgtttgcggctcctcaccaaga  18289100  Previous    Next  AGI:  At3g49300.1    Description:  proline-rich family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49305.1) Range:  from: 18287755    to: 18288590    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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