Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->YAB1                                                                <-----------HVH21                                                              --------->ALFIN1      <----------ID1                     ----------->GT1                        <-----------RAV1(1) ---------->DOF2     --------->TOE2(3)                              <---------AHL20(2)      --------->AHL20(2)     --------->TOE1(3)                             --------->AHL20(2) --------->ANAC58         ------ ->ZmHOX2a(1)       <-------TEIL                   <---------AHL20(2) --------->ANAC58         <-----   gtataaaccctaactcttaaaattcgtaaaaaactgaaacacaaaccctcaaatttaatccaatgtggtcgcatgcaataaaaaaagaaacaaaatgtcg  18271600                                             <-------TEIL        --------->TOE2(3)                  <---------ARR14(2)                                 -------      <-------TEIL                         --------->ARR14(2)                        <------ZmHOX2a(2)     --------->CCA1(2)           <----------DOF2                                     <---------YAB1<- --->ETT(2)           --------->DAG2       <---------GLK1(2)                        <---------ARR11(3) ----ETT(2)          ---------->DOF2 <-----------GT1                                --------->ARR11(3)   agagtagatacatcaataaacaataaagcacgagtcttttctccagattcacagaaaaattcagagagacttcatcgtttaagagagatcatagactaaa  18271700                                                                     <---------WRKY18(1)                                                                    --------->WRKY45                                                                    <---------ETT(2)                                                                    --------->WRKY12                                                                    --------->WRKY38(1)                                                              ------>MYB46(1)                                                              -------->P                                                              ------>MYB83                                                            --------->AtMYB61                   <----                 <---------MYB52(2)                         <---------MYB111(1)               <------      <---------MYB52(1)                                    ------->GAMYB                     -------    --------->MYB52(2)                                     <---------MYB52(2)                 -------   <---------TOE1(2)                                       <---------MYB55(2)    <-------TEIL <------  <---------MYB52(1)                                       --------->MYB46(3)  --------->ARR14(2) --->DOF2 <-----------GT1                                 --------->ANAC46     <---------ARR14(2) ------TEIL<-----------GT1                               <-----------GT1  <-----------HVH21------>ZmHOX2a(1)   gttcgttcgttttttcccaactaatctagttccattttgcaattgaactgagtttttttcaaccaacctgttgaccagtcggatacattgctcctcagct  18271800                        --------->At4g35610                --------->ARR11(3)                --------->ARR14(2)                --------->GLK1(2)                <---------ARR14(2)        --------->At5g28300 ------DOF2     <-----------ARR10        --------->LBD16 ---ZAT2   --------->LBD16<----------DOF2----------->GT1                          <---------MYB52(1) -->At4g35610   <---------ARR11(3)     <---------LBD16                <---------At4g35610          -- -->ZAT2 <---------LBD16<---------At4g35610   ------->TEIL   <----------DOF2   <---------LBD16 ------ ---At4g35610  <---------GLK1(2)     <-----------GT1        <------------------------ANAC81  <-------   tcaatgttatcaccggagaatctttctgcttcaatgttatcaccggtgaatctctctctctctctttctctctgcttcttctccggtctctgtgagtgtg  18271900                                                                                      <---------AHL20(2)                                                                                   --------->YAB1                            --------->LBD16                                        *TSS                           <---------HSFB2a(2)                        --------->AHL20(2)  XXXXXXXXXXX                           --------->HSFB2a(2)                        <---------AHL20(2) <-----------   <---------AHL20(2)     <---------LBD16                  --------->AHL20(2)     <---------ATHB51 --------->GT1      <---------ZAT18                        <---------AHL20(2)     <---------ATHB12 --->ALFIN1        <---------ZAT6                      --------->AHL20(2)   --------->ANAC46     ---- --ZAT6       <----------DOF2                        ----------->GT1 --------->AHL20(2)---------->DOF2   agggtttaatttttgtctttagtgttcttctggagaaaaacagccaattgttgtgaagtaattaaactaaattaaaatacaccaataataaaaggaacgt  18272000                                         --------->AHL20(1)                                   <------                                         <---------AHL20(1)                     <---------HSFB2a(1)                                        --------->YAB1                          --------->HSFC1(2)    --------------->AGL15          ------------>CBF                             --------->HSFB2a(1)   ----------------->AGL1      <---------YAB1                              <---------LBD16<---------ZAT18   ----------------->AG      --------->YAB1   <-----------GT1              <---------------------WRI1 XXXXXXXXX>MIR866-5P  <-----------GT1   --------->AHL20(2)            --------->YAB1      --------->ZAT18 ----AtSPL8      ---------->DOF2 --------->WOX13(1)                  <---------ATHB12    --------->ALFIN1 --->TEIL ----------->GT1 <----------DOF2<---------AHL20(2)      ------------>CBF --------->GLK1(2)   attttgccaaaaatgtaagaaaagtttccttttatcattcaattatattttctggccttatttaaggcccaataatcttcggagattccaagtgggcttt  18272100                                                        <---------YAB1                  <---------ARR14(2)                         <----------DOF2                ----------->GT1                 --------->ARR14(2)             ----------->RAV1(2)                      <---------ICU4                ---------->ID1 ----DOF2   ------>ZmHOX2a(1)    <----------DOF2   --------->YAB1          ----------->GT1   gtgcttcatacctccttctgagcctgactttctcactttgtagcatattagtttgataatgaaaaaacccgaaccagaggtaatttctcgtatttgagtt  18272200                                                                        <------ZmHOX2a(1)                                                                   <-------GAMYB                                                                  --------->MYB52(2)                                                                  <---------MYB46(3)                                                              <------MYB46(1)                                                              <------MYB83                                                             --------->MYB111(1)                                                             --------->MYB59                                                             --------->MYB52(2)                                                             --------->MYB46(2)                                                            <---------MYB55(1)                                                         <---------ANAC58                                                         <---------ANAC58                                                   <-----------HVH21<---------MYB52(1)           <-----------HVH21                    <---------ANAC46 <-------TEIL                       <       <-------TEIL      <-----------GT1     <---------AGP1<---------MYB52(1)      <---------ANAC46--   cgataccgatacatgtcaaaccagtttttatcttacaaattcaactagttctgtgtcatgcgttaggttcgttaggaaaacgactctgtgtatcgatatt  18272300       <---------ZAT14                  --------->bZIP60(1)       <---------SPL7                ----------->HVH21       --------->ZAT14             --------->ANAC55(2)      --------->DEAR3(1)           <---------ANAC55(2)                       <-----------GT1   ------   --------->ANAC58            --------->ARR11(3)                         --------->YAB1    <------ZmHOX2a(1)   --------->ANAC58         --------->AHL20(2)                       <---------YAB1       --------->ANAC46  --------->SPL7       <---------AHL20(2)         <---------YAB1 --------->TOE2(3)        <---------TOE2(3) ---------SPL7         --------->AHL20(2) --------->ICU4        <---------ICU4       <---------AHL20(2) ------->ETT(2)       --------->AHL20(2)<---------bZIP60(1)     --------->YAB1  <---------AHL20(1)   gtcgaacgccgtactggttttctattaaaaaaaaatcatgtgacatgatgttatgtttttgcctaaacattatcatttataacatattttataaggaatg  18272400                                                <----------DOF2                  --------->TOE2(3)           <---------ZAT2           <---------YAB1        --------->AHL20(2)     <---------YAB1                 --------->ALFIN1      <---------TOE1(3)---------->DOF2        --------->ZAT2                 <---------At4g35610 --->ICU4<----------DOF2 ----------->GT1--------->GLK1(1)         --------->AHL20(2) <---------ANAC46   ttgaatttaagctttgattacattagaaagaaaaaaaaaatgaattccagctttgtttatgcttaaaaaaaaatagtttagctactcgtgtggatgtatg  18272500  Previous    Next  AGI:  At3g49250.1    Description:  similar to ATP binding [Arabidopsis thaliana] (TAIR:AT5G24280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48648.1) Range:  from: 18269246    to: 18271983    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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