Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->LBD16                      ---------->DOF2                      <---------ALFIN1              --------->ATHB12 --------->ANAC58         --------->MYB46(3)             <---------YAB1    --------->ANAC46         --------->REM1(1)            <---------GLK1(2)  --------->ANAC58       ----------->RAV1(1)        ---------->DOF2      <---------ALFIN1      --------->ANAC55(1)   --------->ZAT18   <---------WRKY45              --------->ANAC58  ------->GAMYB      <---------WRKY12              <---------ANAC55(2)                    --------->TOE2(3)  --------->DEAR3(1) <---------WRKY38(1)           --------->ANAC46              --------->TOE1(3) --------->DEAR3(2) <<<<<<<<<<WRKY62               --------->ANAC58              --------->TOE2(3) --------->MYB46(3) <<<<<<<<<<WRKY40               --------->ANAC55(2)     <---------ATHB12 ------->ARR14(2)   --------->WRKY18(1)  <---------HSFB2a(2)   --------->HSFB2a(2)      <-------TEIL --------ARR14(2)   <<<<<<<<<<WRKY18     --------->HSFB2a(2)------->GAMYB--------->WOX13(1)  -------- ---->DOF2--------->ICU4   --------->CCA1(2)    <------ZmHOX2a(2)  ---------->DOF2  <---------ICU4   agaaccgccctaaagattattggtcaaagaaacacgtccagttctcgacgatcacgcaacaacacccagaaaagtcaatgaaaccataaatacatcaaag  18251800                                                                  --------->ICU4                                                                 <---------AHL20(2)                                                                 <---------AHL20(1)                                                        <-----------GT1<-----------GT1                                         <---------AHL20(2)   --------->AHL20(2)       --------->TOE2(3)  --------->TOE1(2)  --------->AHL20(2) --------->YAB1                    <-- -->DOF2                  --------->TOE2(2)  <---------AHL20(2)<---------AHL20(2)              ------   agttgaaaacattaatctatgttttatacatacgagttgatattttttttaatacatataactatataatatttaaccatgttgtattcatatgtacgag  18251900                                                                           --------->HSFB2a(2)                                                                  --------->YAB1    ------>ZmHOX2a(2)                                                            ===========================HOX2a_HOX2a                                                            ===============================HOX2a_HOX2a                                                            ------>ZmHOX2a(1)     <---------ARR11(3)                                                           --------->TOE2(2)      --------->ARR11(3) -------AHL20(2)          --------->CCA1(2)                --------->TOE1(2)    ------>ZmHOX2a(2) ----->GT1       <-----------GT1<------ZmHOX2a(1)   <----------DOF2      ----------->RAV1(2)     ----   ttaatttggactcaccattttactggagaaacgaggatgtctgatcaaagtttgctttaatccttcgatgatcacatctggatcgatcttcttcttgatt  18252000                                                      <---------SPL7                                                      --------->LBD16                                                     --------->RAP2.6(2)                                                     --------->DEAR3(1)                                                    <------NtERF2                                                    <---------LBD16                                                    --------->ATERF1(1)                                                   --------->ABI4(1)                                                   <---------ATERF1(1)                                                  <---------ATERF1(2)                                                  --------->RAP2.3(3)                                                  --------->RRTF1(3)                                                  <---------DEAR3(1)                                                  --------->RRTF1(2)                                                 <------NtERF2                                                 --------->ATERF1(1)                                                 --------->RAP2.6(1)                                                 --------->DEAR4(2)                                                 --------->RAP2.3(1)                                                 --------->ERF1                                                 --------->ORA47(2)                                                ------>NtERF2             <---------ANAC46                  --------->ANAC46             <---------bZIP60(2)              <-------MYC2             --------->ANAC55(2)              <-------MYC3             <---------ANAC58                 ------->MYC2             <---------ANAC55(2)              ------->MYC3             <---------ANAC58     <---------ANAC58--------->RAP2.3(2)             <---------REM1(1)    ----------->GT1--------->DEAR3(2)             <---------bZIP60(1)  <---------ANAC58--------->DEAR3(1)             --------->bZIP60(1) <-------TEIL--------->ANAC46     <---------MYB46(3)            ----------->STF1     <---------MYB46(3)------>NtERF2 <--------P           <---------TGA2(2)    --------->ALFIN1<---------ATERF1(1)        ------>ZmHOX2a(1)          ----------->HVH21    <---------MYB52(1)--------->RRTF1(1)     ------>ZmHOX2a(1)           -          ----------->TGA1    --------->LBD16--------->ANAC58   <-------GAMYB                  <-----  --------->MYB52(1)        <---------LBD16  --------->ANAC58  <---------MYB46(3)         ---------->ID1 ------------->AGL3----------->GT1<---------ANAC46--------->ATERF1(2)  <---------ALFIN1------>ZmHOX2a(1)   ccaataacagagatgacgtagcagttaaactccggtgcgtgaaacacacgcgccgccggactaagcggttgctcctcctcaacttcttcctcgtcgtctt  18252100        <---------HSFC1(2)        --------->HSFC1(2)   --------->ANAC58                                                     <---------AHL20(2)   --------->ANAC58                                        <----------DOF2 <----------DOF2     ------  <---------LBD16         <---------ANAC58         <---------At4g35610  <-----------GT1      <------- --------->MYB52(1)       <---------ANAC58      --------->At4g35610 <------------------------ANAC81 < ----->ZmHOX2a(1)  ------->TEIL                 <---------At4g35610<---------AHL20(2) --------->TOE2(3) -----DOF2        <---------CCA1(2)            --------->MYB52(2)<----------DOF2   <----------DOF2  -   tcctcacggatgtttctgatgtatctcgtcgtgtcttaatctccatggtttgctgcttagtctttctcttttattttctttctctctttcttaaactttt  18252200         <---------ANAC58                          --------->AHL20(2)                       ---------      <----------DOF2                     <---------DAG2   <----------DOF2                  --------- --->AHL20(2)                       --------->ANAC46    <-----------GT1             --------->MYB52(1) ---DOF2 <---------ANAC58   <---------ATHB12       <-----------TBP   --------->ALFIN1  ------->GAMYB ---------ARR14(2)      ------------>CBF  <----------DOF2  <---------DAG2      <---------CCA1(2) -------->ARR14(2)    *TSS <------------CBF      <----------DOF2     <-----------RAV1(1)    <--------   aatattcgctttcttgatatatagcctccaattgttctatgccactttcttctttatataactttttggatgtgttggattatatctaaccgaaaaaatt  18252300                                                                                       --------->ARR11(3)                                                                                       <---------ARR11(3)                                                                                      <---------CCA1(2)                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)                                                                                 -------->HAHB4                                   <----------ID1                                <--------ATHB1                                <---------ICU4                                   --------->ATHB51                                <--------ATHB1                                   <--------HAHB4                        ---------->DOF2                                          <---------ICU4                     --------->ANAC46                                           --------->AHL20(2)                --------->YAB1  --------->YAB1                                  <---------ATHB51         --------->MYB46(3)    <---------ATHB12                                 <---------ATHB12       <---------ARR14(2) --------->ANAC58                                      --------->ICU4       <---------TCP15(1) --------->ANAC46                         --------->YAB1--------->YAB1       <---------TCP20  --------->MYB52(1)                         ----------->GT1 <---------YAB1       --------->PCF2--------->ANAC55(2)                  <---------TOE2(3)     <---------YAB1      - >AHL20(2)      <---------ICU4 --------->ICU4            ---------->DOF2 --------->AHL20(2)         - >ICU4 --------->ARR14(2) --------->ANAC58             <---------YAB1 --------->YAB1--------->YAB1  < -AHL20(2) ------------>CBF    <---------ATHB51 ----------->GT1<---------YAB1 --------->YAB1 <-------   agtaactcggacccacaatcttcacataacgcaataatggacaaaacgtttagtaatattaaagtttgatagtaataaactaataattatatcttatgac  18252400                                                                               <---------YAB1                                                                              <---------AHL20(1)                                                                             <---------ICU4                                                                            --------->ICU4                                                                            <---------YAB1                                                                          <--------HAHB4                                                                          --------->YAB1 -------->ARR11(3)                      <---------AHL20(2)                <---------ICU4         <--- -------->GLK1(2)                    ----------->GT1                     <---------YAB1          <--- ---------ARR11(3)           --------->AHL20(2)                          --------->ICU4    <--------- --YAB1<---------YAB1      <---------GLK1(2)   --------->ZAT6          --------->YAB1     --------->AHL20(2)   aaaatctttataattctattgtttacttagattatttaagagttaattaacacaaatctatttcatatttcagttatcattatttttcaaaatttactac  18252500       <<<<<<<<<MYB98     ----------->GT1            <---------AHL20(2) ------DAG2                    --------->YAB1      ---------->DOF2 -------DOF2                 --------->AHL20(2)  <---------AHL20(2)                         <-------- --GT1--------->TOE2(3)  <-------TEIL    <---------ATHB12    <-----------GT1 --------->TOE2(3) <-----   ttttgctatgttaaaaattctactaaattcatataatattgaaatcaatatttaaaagagtttttacaacaaaaaaaaacatcaaaatcgtccattttta  18252600                   --------->YAB1            --------->ANAC58            --------->ANAC58            --------->ANAC46            --------->O2            <---------O2            <---------TGA1a            --------->TGA1a                                             <-----------------AGL1      ================bZIP_DOF                                          ---------->ID1      <---------DAG2<---------AHL20(2)                 <---------ANAC55(2)  --------->ATHB12   <-----------GT1 --------->AHL20(2)                  --------->ANAC55(2)xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------DAG2    <---------AHL20(2)                  ----------->GT1  <-----------------AG =====================bZIP_DOF                     --------->AHL20(2)<---------DAG2 <----------DOF2   <---------AHL20(1)            --------->AHL20(2)  <----------DOF2 -ICU4<----------DOF2                           --------->YAB1 <-----------GT1  ----------->GT1 ------GT1<-----------GT1              --------->AHL20(2)<---------AHL20(2)<---------MYB52(1)       -   caactttacttttcacgtcaataaaattcaaaataaacctataaaatccaaaataatatgtaatttagccacttttcgttattggtaaattttaaaattt  18252700  Previous    Next  AGI:  At3g49210.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49200.1); similar to condensation domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G49190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48523.1); contains InterPro domain Protein of unknown function UPF0089 (InterPro:IPR004255); contains InterPro domain Protein of unknown function DUF1298 (InterPro:IPR009721) Range:  from: 18249033    to: 18252222    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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