Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                                     ---------->DOF2                                                                                  --------->TOE2(3)                                ---------->DOF2                                   ------->GAMYB              ----------->RAV1(2)  <----------ID1                                <----------ID1------              --------->At4g35610  ----------->GT1                               --------->MYB46(3)              <---------At4g35610--------->DAG2                        --------->TOE2(2)    ---------      <---------WOX13(1)    <----------ID1          <---------WOX13(1) --------->TOE1(2)    --------- ------ARR14(2)        --------->YAB1        <---------YAB1    ----------->GT1 --------->ARR14(2)---- ----->ARR14(2)      --------->GLK1(2)  --------->GLK1(2)     ----------->GT1  <---------ARR14(2)----   atcgactaattgaatcacctgagaatcaaaacgaaaaaggagaaactgttatagattgacacagaggttaaaacctaggcataaccacaaagacaagaaa  18235500                                                            <------ZmHOX2a(1)                                                           <----------ID1           --------->YAB1 >ANAC58                                                ---------->DOF2            <---------ATHB12 --->MYB52(1)     ---------->DOF2                  <---------ANAC58        ------>MYB46(1) >ANAC46   --------->ANAC58                        <---------ANAC46        ------>MYB83       <------ZmHOX2a(1) >ANAC58   --------->ANAC58                        ----------->GT1         -------->P        -------- ----->ANAC58   ------------------------>ANAC81    <---------ANAC58   --------->ANAC58      --------- ----->ANAC58 ---------->DOF2  <----------ID1     <-------TEIL        --------->ANAC58     <---------LBD16   cgaaacatgtataacgcaaagaaagaaaacaaaaaaacaaacaaattccaagttcgtgaaaaggacaaaaacaagcctaccacaaatcaaaatccaggaa  18235600                                                    --------->HSFB2a(2)                                                    <---------HSFB2a(2)                                                   <---------LBD16                                                 <---------ARR11(3)                                                 --------->ARR11(3)           --------->ANAC58                      <---------ARR14(2)      <-----------ARR10                          --------->ARR14(2)     <---------CCA1(2)                          --------->CCA1(1)                                   -   --------->YAB1                               --------->RVE1(1)                              ------  <---------ATHB12                      ----------->GT1                 ------->GAMYB          ------ ->ANAC46  --------->ANAC46       <---------HSFB2a(2)                --------->MYB52(1)    <------ZmHOX2a(1) >LBD16    --------->ANAC58       --------->HSFB2a(2)         --------->YAB1              <----------ID1   acaaatcatatctaagcaaataagttttctaggctactggaattgagaaaatatctggaaggaatcaaaatcaaccgaaactcattccctagaggacaag  18235700                                                                                ---------------------                                                                               >>>>>>>>>TBF1                                                                              xxxxxxxxxxxxxxxxxxxxxxx                                                                            >>>>>>>>>TBF1  >>>>>>>>>TBF1                                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <---------ARR11(3)                                              >>>>>>>>>TBF1  >>>>>>>>>TBF1         --------->ARR11(3)                 --------->ARR11(3)        >>>>>>>>>TBF1  >>>>>>>>>TBF1 -------->TOE1(2)                           XXXXXXXXXXXXXXXXXXXXX>MIR831xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --->ANAC58 <----------DOF2           <---------At4g35610            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --->ANAC58--------->TOE2(3)  <----------DOF2                   <------ZmHOX2a(1) >>>>>>>>>TBF1   aacatgagaaatacctttgttatggagaagcgctttgttcagataatgtcttcgctctcgtcttgaggagaagaagaagaagaagaagaagaagaagaag  18235800                                                                                                 ----                                                                                                -----                                                                                         <---------TOE1(3)                                                                                         <---------TOE2(3)                                                                        --------->AHL20(2)-----------      --------->ARR11(3)                                              *TSS          <---------MYB46(3)      <---------ARR11(3)     >>>>>>>>>TBF1      --------->YAB1     --------->AHL20(2)<-------GAMYB      <---------GLK1(2)   >>>>>>>>>TBF1        --------->ICU4--------->TOE2(3)     <---------TOE2(3) --->ANAC81            >>>>>>>>>TBF1 --------->At4g35610 <---------HSFB2a(1) --------->DAG2<------ZmHOX2a(1) >smallRNA(se3)     >>>>>>>>>TBF1 --------->At4g35610    --------->HSFB2a(1)---------->DOF2--------->YAB1   agaagacagatttttcaacgaagaagaagaagaagaagcagaagaaagaatgatgaagaattttcttaatgaaataaaaaaagttgtggttaaggataaa  18235900                                                                                         --------->TGA1a                  <-----------HVH21                                                      --------->bZIP60(1)                 ----------->HVH21                                                       --------->O2                ------->MYC3                                                             <---------DEAR3(1)                ------->MYC2            --------->GLK1(2)                                ============                <-------MYC3        --------->LBD16--------->ANAC58                      ============                <-------MYC2       <---------LBD16 --------->ANAC58                      <---------O2         <---------ANAC46         <---------LBD16  --------->ANAC46                      <---------bZIP60(2)         <---------ANAC58        --------->HSFB2a(2)                                     --------->bZIP60(2)         <---------ANAC58<-------TEIL  --------->GLK1(1)                                 <---------TGA1a    --------->ALFIN1   <---------GLK1(2)<---------ARR14(2)                       <---------YAB1 ----->DAG2    <---------ANAC58  <---------HSFB2a(2)                           --------->YAB1  <----- ----->DOF2    <---------ANAC58  <---------LBD16  <---------LBD16  ---------->DOF2       <---------bZIP60(1) >GT1 --------->ALFIN1--------->At4g35610   ----------->GT1        ================================bZIP_DOF   aagggagtgtggcgagcgcgtgtcagattcatcttctcggggaatctagtaacacggacggatgaggctgaaaggtccccattataaaacgacgtcgctt  18236000                                                                                            <--------                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                              <---------ANAC55(1)                                                                              <---------ANAC46                                                                              ----------->GT1                                                                     ------>MYB46(1)       <---------AHL20(2)                                                                     ------>MYB83--------->REM1(2)                                                                <-----------GT1--------->LBD16                                           ---------->DOF2 ----------->GT1    --------->ANAC55(2)<--- =====bZIP_DOF                     ----------->GT1   <-------TEIL  --------->AtMYB61       --------->AHL20(2) =====bZIP_DOF                    --------->CCA1(2)  <---------WRKY38(1)      <---------ANAC55(2)<--- -----DOF2                   ---------->DOF2   --------->MYB52(1)  <---------MYB59        <---------WOX13(1)   tgtttttctaaacctattcagacaagagacccaaagatagaaaaaaaaagaccggtccatgcggtttaaccaaaccaattccgtgaaaactgattaattt  18236100                            <------MYB83                            <------MYB46(1)           <<<<<<<<<<<<<<<<<LFY          <---------------AGL15         ----------------->AGL1         <-----------------AGL1                                                  --------->YAB1   <<<<<<<<<GATA-1          ----------->GT1                                      <---------ICU4  <-----------GT1          --------->MYB59                                    --------->YAB1 -AHL20(2)--------------->AGL15                                  --------->YAB1 <---------YAB1 ---MYB83----------------->AGL2        ---------->DOF2        ------>ZmHOX2a(1) <---------AHL20(2)  < ---MYB46(1)               --------->MYB46(2)      ---------->DOF2   ---------->DOF2     ---------->DOF2   ggtttatctattccaacaatggaaattgtttggtaaattttaaaagagtttgggaaagtagctcctattgtaaaagagttttataattagacaaagtcgt  18236200                     ------->GAMYB                  --------->MYB52(1)                 <---------ZAT14                 --------->ZAT14               --------->ANAC46               --------->ANAC55(1)      --------->CCA1(2)                                  <-----------GT1          <---------ICU4   ------->TEIL<---------ANAC55(2)                   <----------DOF2           --------->YAB1   <---- ---------YAB1 --------->ANAC55(2)       --------->AHL20(2)               --------->AHL20(2)    <----   ttatgaatatatgaaacacttaactgactatttcaaatttcaaatatatgtataacttttaaccatgtaagaacaaaaaaataagaatggctaagtttgc  18236300                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                               ------                                                           <-------TEIL                        ------                                           <---------AHL20(1)                                  <-----                                           --------->AHL20(2)                 <---------HSFB2a(2)         ----------->GT1                   --------->AHL20(1)   --------->ATHB12               <-----     <---------GLK1(2)                     <---------AHL20(2)   <---------AHL20(2)             ------     --------->ARR11(3)                 <---------------AGL15  <---------AHL20(2)           --------- -----ANAC58                         <-----------GT1   <---------YAB1         --------->HSFB2a(2) <-- -----ANAC58              <---------ICU4--------------->AGL15  --------->AHL20(2)      ----------->GT1   ttaattagattttgtaaaatttgacacattatttctaaattacattttattgaaactatgattcatttattggatgttttttagaaagtttgtgaaaatt  18236400  Previous    Next  AGI:  At3g49160.1    Description:  pyruvate kinase family protein. similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G63680.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ55912.1); contains InterPro domain Pyruvate/Phosphoenolpyruvate kinase, catalytic core; (InterPro:IPR015813); contains InterPro domain Pyruvate kinase; (InterPro:IPR001697); contains InterPro domain Pyruvate kinase, beta-barrel-like (InterPro:IPR011037); contains InterPro domain Pyruvate kinase, barrel; (InterPro:IPR015793) Range:  from: 18232979    to: 18235870    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g49162.1    Description:  pseudogene of glycoside hydrolase family 28 protein Range:  from: 18236364    to: 18237790    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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