Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <-----------ARR10                                     <---------CCA1(2)                                   <---------ANAC58                    <---------------AtSPL3                                                         --                    --------------->AtSPL8                           <-----------GT1              ---         <---------YAB1            <---------ANAC46              <---------AHL20(2)              <---       <---------ICU4              <---------ANAC58              --------->AHL20(2)            ------       --------->YAB1     <----------DOF2                       <---------AHL20(2)         ------>ZmHOX2a(1)  <---------WOX13(1)<---------------AtSPL8   ------>ZmHOX2a(1)  --------->AHL20(2)  <---------ARR11(3)   aatgactgatcatgaaaatgttatagtactttcaatggcttatcttcctctagttcatatagagaataaaattacacatttctcaacatattcctagcaa  18202500                                                      <---------AHL20(1)                                                      --------->AHL20(1)                     --------->LBD16                  <---------AHL20(2)                    <---------HSFB2a(2)    <---------GLK1(1)          --------->YAB1                   --------->GLK1(1)         <---------ATHB12                  --------->ARR14(2)       --------->WOX13(1)               --------->LBD16 -------->DOF2      --------->HSFB2a(2)--------->HSFB2a(2)                                   <------- ------>YAB1  <---------ARR11(3)       <---------HSFB2a(2)          --------->YAB1    --------------- ------ATHB12 --------->ARR11(3) <---------AHL20(2)   --------->AHL20(2)              <-------------- --->WOX13(1) --------->ARR14(2) --------->AHL20(2)  --------->AHL20(2)         <---------AHL20(2) --   tcaaagaaacaatcaatatctcccagaaattttaaaaaattccagaattctcagaataaattctaaacaaacaaaattcgattttattctaaattttgca  18202600                                                                                              <------                                                                                             <------NtERF2                                                                                          <------ZmHOX2a(1)                                                                                       <---------LBD16                                                                                    --------->ANAC46                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                                ------>ZmHOX2a(2)                       ---------->DOF2                                          =================HOX2a_HOX2a                   --------->ANAC46                                            ==================HOX2a_HOX2a            ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)           <------ZmHOX2a(2)                                                  <---------ARR14(2)          --------->AGP1                                                      --------->ARR14(3)          <---------AGP1                                                      --------->ARR14(2)          <---------ARR11(3)                                                  <---------AGP1 --------          --------->ARR14(2)                                                  <-----------ARR10 ----GT1  <---------ARR14(2)                                                  <---------ARR11(3)<---- >AGL15   --------->ARR11(3)                                                  --------->ARR11(3)<---- -AGL15   <-----------ARR10--------->TOE2(3)                   ---------->DOF2<---------ARR14(3)----- ------->AHL20(2)--------->ANAC46       ---------->DOF2---------->DOF2  >>>>>>>>>TBF1  <-----------RAV1(2)   attcaataaacagatctatacaccaaaaaccacaattcaacacaaagaactaatttagaaagtgagaaagagaagaagaagatctcactccaggaggcag  18202700                                                         <------NtERF2                                                        --------->ABI4(1)                                                        ------>NtERF2                                                       --------->RAP2.3(2)                                                       --------->DEAR3(1)                                                       <---------ATERF1(2)                                                       --------->ATERF1(2)                                                       --------->RAP2.6(2)                                                       --------->RRTF1(3)                                                      --------->RAP2.6(1)                                                      --------->DEAR4(2)                                                      --------->ERF1                                                      --------->RAP2.3(1)                                                      --------->DEAR3(2)                                                      --------->ORA47(2)                                                      --------->RRTF1(1)                                            --------->DAG2                             --------->ARR14(2)      <---------ATERF1(1)                            -                             <-----------ARR10      --------->ANAC46                               <-                             <---------ARR14(2)   <---------ANAC55(2)                             ---                             <---------ARR11(3)   <---------ANAC58                                ---                             --------->ARR11(3)   <---------ANAC58                               ----                             <---------ARR11(1)   --------->ANAC55(2)                            <---                            <---------ARR14(1)  <-----------GT1                                  ----                        --------->ANAC58   ---------->DOF2                                      -----                        --------->ANAC58 <------NtERF2--------->ATERF1(1)                      ------       <---------------------WRI1       --------->LBD16--------->RAP2.3(3)                     ------ ---DEAR3(1)        --------->ANAC58   --------->LBD16<------NtERF2                           ------- ->ATERF1(1)        --------->ANAC58   --------->ETT(1)--------->RRTF1(2)               <---------ARR11(3) -----At4g35610    --------->DAG2     <---------LBD16------>NtERF2                   <---------ALFIN1 --NtERF2     ------->TEIL  <---------CCA1(2)   --------->CCA1(2)            <---------ANAC58 ------- ---->At4g35610   ---------->DOF2     ----------------->AGL1                 <---------ANAC58 -------   cgcgagcagttcgatgaacataaagcaagcaaatcttcttgccggaaaagttacgcgccgcccataacaccgtggttttgcttctctccacatcttccgc  18202800     --------->ANAC58     --------->ANAC58   ------>NtERF2 -------->DEAR3(1) -----NtERF2 --->NtERF2 ------>ABI4(1) ----->DEAR3(1) ------ALFIN1 ----->AtMYB61 ---->MYB46(3)                                    --------->GLK1(1) --->LBD16                          <---------ARR14(2) >NtERF2                            <-----------ARR10                     <---------ZAT14 -->ANAC58                          <---------ARR11(3)                    --------->ZAT14 -->ANAC58                          --------->ARR14(2)     <---------CCA1(2) -->ANAC46           <---------ALFIN1       <---------ALFIN1    <-----------GT1        --------->ZAT6   caccgcgacgaaaatcgtctcatccacatctaagaccagttcttctccaccgatttctcccatatttttcgccctcttcactctctctatctctagattt  18202900                    *TSS                                <---------ARR14(2)             --------->YAB1                    <---------AHL20(2)          --------->HSFB2a(2)              <-----------TBP              --------->LBD16          <---------HSFB2a(2)              --------->AHL20(2)          <---------ANAC46        <-----       --------------->AGL15      --------->DAG2  --------->DAG2    --------->GLK1(2)          <-----       <---------------AGL15     ---------->DOF2 ---------->DOF2    <---------ARR14(2) <---------MYB52(1)   <----------DOF2  <---------MYB46(3)   <----------DOF2--------->ARR14(2)   <------------CBF  <-----   gataactttcttctataagcatttgttcgatttgcaaaagtgactttatataaaagtggaaactcgtgagattccgtcgaattggaatcgtttttttatg  18203000                                                                                 <-------TEIL                                                                              <------MYB46(1)                                                    <---------ARR14(2)        <------MYB83                                           ------>MYB46(1)                    <---------DEAR3(2)                                           ------>MYB83                       <---------MYB46(3)                                         --------->TOE2(3)<------ZmHOX2a(1)  <---------AtMYB61                                         <---------MYB59----------->GT1      --------->MYB111(1)                                         <---------MYB46(2)                 <--------P                                        ----------------->AGL1            --------->ATHB12                                        --------->ANAC55(2)               <---------MYB46(3)          --------->At4g35610           ----------------->AG             <---------YAB1 <---------SPL7                       <-----------GT1--------->CCA1(2)   <---------TOE1(3) ----TOE2(3)            <---------YAB1<<<<<<<<<GT-1 <---------ARR11(3)   <---------TOE2(3) ----YAB1 <---------At4g35610<---------WRKY12 --------->YAB1    --------->AHL20(2) ----TOE1(3)----------->HVH21<---------WRKY38(1)    --------->ARR11(3)   <---------AtMYB61  <--------   gttcggacgagttgctgactcggtttatgagtcaaccgatttacctaattagaagatataggaaaaaaaaatgttatggttggttcattttttgatgaat  18203100                                                                      --------->ANAC55(2)                ---------->DOF2                                 ----------->RAV1(1)          --------->ANAC46                                     <---------ETT(1)       ------>MYB83                  ----------->GT1           --------->ANAC46       -------->P               <---------AHL20(1)         <---------GLK1(1)               <---------       ------>MYB46(1)          <---------AHL20(2)       --------->REM1(1)             <---------GLK1(1) -YAB1------>ZmHOX2a(1)         --------->AHL20(1)     ------>ZmHOX2a(1)               --------->GLK1(1)   agtctctcctacccaaaacaaagaggtcgtctaaaatatttgttaaaatcggttttcctacatttccgacatatgtaatggattttgggatttcttttga  18203200                --------->AHL20(2)                                                 --------------->AGL15             --------->TOE2(3)                       ---------->DOF2               <---------------AGL15  --------->TOE2(3)                    <---------ANAC58                         --------->ZAT6   ----  ----------->GT1         <---------ARR11(3)        --------->AHL20(2)         <---------YAB1-------- ----------->GT1--------->ATHB51       <---------ANAC58                    --------->AHL20(2)-------- -DOF2  <---------ICU4    --------->ARR11(3)     --------->YAB1            <---------AHL20(2)<-------   caaatgttaaaaattccataatttagactatcttgtatttggcttgcccaaaaataaaagactcttgcatttggcatttttatgactactaatagaatcc  18203300                                                             <---------AHL20(2)                                                         <---------AHL20(2)                                                         --------->AHL20(2)       --------->AHL20(1)                                                      <---------ICU4      ---------->DOF2 <---------ARR11(3)                        <---------HSFC1(1)<---------YAB1       <---------AHL20(1) --------->ARR11(3)                        <---------HSFB2a(2)        --------->At5g28300 ----->LBD16                               --------->HSFB2a(2)     <---------TOE2(3)        --------- ->GLK1(2)         <---------AHL20(2)      --------->HSFC1(1)--------->AHL20(2)  --------->AHL20(2) ->ARR14(2)       --------->YAB1   --------->YAB1 --------->AHL20(2) ----------->GT1    <-------TEIL --ARR14(2) ----------->GT1 <---------ETT(1)  <------ZmHOX2a(1)    <---------ANAC46--------->AHL20(2)   gaatatcatccaaatagaaataaaaatgttccgacactaatatttctaggaattaaaaattatataattgagggtaaaaagaaatatatatacataccgt  18203400  Previous    Next  AGI:  At3g49060.1    Description:  protein kinase family protein / U-box domain-containing protein. similar to protein kinase family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G45910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49439.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 18198199    to: 18202920    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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