Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------AHL20(2)                      <---------TOE2(3)                      <---------TOE1(3)                                    <-----------GT1        ---                     ---------->DOF2                       --------->TOE2(3)     <---------ATHB12 <--         <-----------GT1   --------->AHL20(2) <---------ATHB12       --------->ICU4   --------->YAB1 ---------->DOF2    <---------AHL20(2)  XXXXXXXXXXXXXXXXXXXXX>MIR864-3P<---------ARR11(3)        ---- >AHL20(2) --------->TOE2(3)   --------->AHL20(2) ------->GAMYB      <---------YAB1   --------->AHL20(2)   aacaaaagttttttcttaatatttaaagtttatataaatcacaaaccaataacaccctaaatctaaatctcatgattttacaaatcaataaaaacttcat  18188300                                                                 <---------AHL20(2)                                                                 <---------ICU4                                                                --------->AHL20(2)                                                              --------->YAB1                                                             <---------ATHB51                                                          <---------YAB1                                                        <-----------GT1                            --------->ATHB12         <---------ICU4                          --------                            <--------HAHB4          <---------AHL20(2)                       --------                            <---------ICU4          <---------AHL20(1)                       <-------             <---------ICU4<---------YAB1           --------->AHL20(1)                      <--------             --------->YAB1--------->ICU4        --------->AHL20(2)              --------->TOE2(3)      --------->TOE2(3)  --------->YAB1         --------->AHL20(2)             --------->ARR11(3) ------>AHL20(2)        <---------AHL20(2)      <---------AHL20(2)             <---------ARR11(3)   < -------AHL20(2)    --------->AHL20(2)     <---------ATHB12--------->YAB1     --------->RVE1(1)<----- ----->AHL20(2)<---------YAB1   --------->AHL20(2)  --------->AHL20(2)  --------->YAB1    -----------   ttaattcacctaaaatcatcatatatataatcatttaaaactcaaatcatttaaaatattacaataataaatactcataaaaatctcaacttatatatat  18188400    ------->MYC3    <-------MYC2    ------->MYC2    <-------MYC3 ->AHL20(1)                                                 <---------ANAC58 ->ARR11(3)                                                 <---------ANAC46 --AHL20(1)                    <---------ANAC58             <---------ANAC58 -AHL20(2)                     <---------ANAC46      <----------DOF2                        --------- ---------ZAT18       <-----------GT1             <-----------GT1                          --------->AHL20(2) -------CBF       ------>MYB83 <---------ANAC58   ---------->ID1                     --------->ANAC58 >TBP             ------>MYB46(1)                <-----------GT1<---------YAB1       --------->ANAC58   tgggcacatgggtcgagaccaaataaacccattccttgttttttttttttttttcctttctggcttgtgatttcagtttaatatcgaacccaaataaaaa  18188500                                                            <---------ARR11(3)                                                     <------NtERF2                                                     --------->ATERF1(1)                                                     --------->TGA2(2)                                                    <-----------TGA1                                                    <-----------HVH21                                                   --------->bZIP60(1)                                                   <---------ANAC58                                                   <---------ANAC58                                                   <---------bZIP60(1)                        <------                                                  ---------->ID1                             <-------                                          <---------TOE2(3) <---------ARR14(2)               <-------                                          <---------TOE1(3) <---------ARR11(1)               <-------                         <---------ZAT6  <---------DOF5.7(2)--------->ARR14(2)         <---------ANAC58 >AHL20(2)         <----------DOF2       --------->MYB52(1)<---------CCA1(2)           <---------ANAC58   ataaaactcactgttgatactcttttagtgttttctgtctcgctaacgttttggcgtcaccatatctacagtttttagtgtgtttttatgcgtttgcgtt  18188600                                                                                                  <--       <---------ZAT14                                                                 <---------ANAC58       --------->ZAT14                                                      <---------MYB52(1)    --- -GAMYB--------->ZAT18               <-----------GT1                     <-------TEIL  <---------ANAC46 --ANAC58                       --------->ARR11(3)                       --------->SPL7<---------ANAC58 --ANAC46                       <---------ARR11(3)             --------->MYB46(3)   <----------DOF2 --ANAC58                      <------ZmHOX2a(1)  --------->MYB52(1) <---------------AtSPL8    ------   ggcatttggagcactgagaaggcatactctgaaggatttttactcgctctattaacgacgatggaacaactatggtacgttgttttctttcgtttatgtc  18188700       --------->HSFC1(1)                                 <---------ARR11(3)       --------->HSFB2a(2)                                --------->ARR11(3)       <---------HSFB2a(2)                           --------->YAB1 --------->TOE2(3)       <---------HSFC1(1)          <---------At4g35610  <---------AHL20(2)          <----------DOF2 --------DOF2                 <---------YAB1     --------->ZAT6     --------->TOE1(3)  <---------ANAC58 --->ZmHOX2a(1)       <---------TOE2(3)   --------->At4g35610     ------->TEIL <----------DOF2    <-- ---->ID1       <----------DOF2    --------->At4g35610 <---------ATHB12---------->DOF2 <---------ANAC58   cttttttttctcgaacccctttctatggttttattttagctgtaagctctaacactaataaatctttgaaccttaaaactccttttctttcgttctaatt  18188800                                                                         <---------ANAC46                                                                         <---------ANAC58                <---------MYB46(3)                                       <---------ANAC58               <---------YAB1                                        <----------DOF2            <---------AtMYB61<---------DAG2                  <---------ANAC46            --------->ALFIN1 <----------DOF2                 <---------AtLEC2            <---------DEAR3(1)                               <---------ANAC58     ---------->DOF2     <---------TOE2(3)          ----------->GT1 XXXXXXXXXXXXXXXXXXXX>MIR783   <--    ------->GAMYB <---------WOX13(1)             --------->GLK1(2)------->TEIL         --------->ARR11(3) ---------GT1<---------MYB46(3)            <------ZmHOX2a(1) <---------ANAC58      <---------AHL20(2)   ttacaacgaaagcggtggtgattgtttgaggctttttgagaatgaggacagaatcagtgaattgcatgaagctttgcttgttcatataatgtcttcactt  18188900                   --------->TGA1a                   <---------TGA1a                   <---------O2           <---------ANAC58                                                                     <----           <---------ANAC46                                                                    ------           <---------ANAC58                                          --------->TOE2(3)         ------         <-----------HVH21                      --------->ATHB12   --------->ARR11(3)        --------        <-----------RAV1(1)               <----------ARF1          <---------ARR11(3)        <------- -------ETT(1)     --------->O2      --------->TOE1(2)  --------->MYB52(1)                <----------   ccgacaaaaactgtcgtagccacgagtgttttgtctaaacgttggagacatgtttggaaaacggtgcaaaatctcaaatttgtttctaagtatcaccaaa  18189000                                                                                               ------                                                                                              <------ZmHOX2a(2)                                                                                             <-------                                                <---------HSFB2a(2)                          --------                                   ---------->DOF2                                           -------- -----ATHB12        <---------RVE1(1)           --------->HSFC1(1)                           <------- >MYB83 <------ZmHOX2a(1)       <---------ANAC55(2)         <---------ARR14(2)               -------- >MYB46(1)         <---------ARR11(3)           <---------HSFC1(1)                           -------- ->MYB46(3)        --------->ARR11(3)           --------->HSFB2a(2)                          <------- --MYB46(2)        <---------GLK1(2)--------->DAG2          --------->ARR14(2)               <------- -GT1<---------At4g35610  <---------TOE2(3) <---------MYB52(1)                              <--------   cattttcagaggatgtttacagattttttatgttacataaagctccgtttctagagagtttggatttggaatttagtaatcaacttgatgcttcagatct  18189100          <------MYB83      <---------MYB46(3)      --------->ATHB12      --------->MYB55(2)  --------->KAN4(1)               --------->ANAC55(2) >ZmHOX2a(2)                   ------->MYC2                                                   ------- --ARR14(2)                    <-------MYC2                                                   <------ ->AGP1 <--------P             <-------MYC3         ------>ZmHOX2a(2)                        <------- ->ARR14(2)              --------->ANAC58 <------MYB83                                       -------- --ARR11(3)      <---------ANAC58 <---------ANAC58<---------AGP1                             <------- ->ARR11(3)      <---------ANAC46 <---------ANAC58<---------ARR14(2)              <---------ANAC46 ->ARR14(3)      <---------ANAC58<-------TEIL     --------->ARR11(3)           <---------MYB52(1) --ARR14(3)  <---------GLK1(1) ------->MYC3       --------->ARR14(2)  <----------DOF2   ------>NtERF2 --AGP1<---------ANAC46  --------->ANAC46 <------MYB46(1)             <---------DAG2 --------->At4g35610 -CCA1(2) <------MYB46(1)--------->ANAC58--------->MYB59         --------->At5g28300 --------->ZAT14   tggaatattggttggaattgcgtttgcacgccatgtgcgtaatttggtattggatctggactattacagtaacttttctcagttatgtgcagccagattt  18189200  Previous    Next  AGI:  At3g49040.1    Description:  F-box family protein. Identical to Putative F-box/FBD/LRR-repeat protein At3g49040 [Arabidopsis Thaliana] (GB:Q9SMU1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G49020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63569.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 18188661    to: 18190324    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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