Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------ATERF1(1)                                                   <---------DEAR3(1)                                                  --------->LBD16                                                  <---------LBD16                                                 <---------ANAC46                                     --------->ARR14(2)  --------->ANAC58                   --------->GLK1(2)  <----------ID1                     <---------ARR14(2)        <---------ZAT14  --------->ANAC58    <---------ARR14(2)         <---------ANAC58                              ------ -------->CCA1(2)     --------->ARR14(2)         <---------ANAC58    <---------CCA1(2)       <------- -->YAB1        <------ZmHOX2a(1)   <---------GLK1(2)<------NtERF2   --------->GLK1(1)       <-------   agagacgacaagtagagaggagcgaaaactcacagagagaatcgtcttcttgcgcggctctagactgaagtatatccaagtctagggtttacgagcttta  18179700                                              <---------PCF2                                             ----------->TCP11(1)                                            <---------MYB46(3)                                           --------->ALFIN1                                    <-----                                          <---------MYB52(1)                                <--------       --------->ARR11(3)                <---------DEAR3(2)                                 <--------       <---------ARR11(3)               <---------DEAR3(1)                                  <--------   --------->ZAT14                      <---------MYB46(3)                       <---------ANAC58 --->AHL20(2)                   --------->ATHB12----------->GT1                  <---------ANAC58 --------AGL15        <-----------GT1   --------->MYB55(2)--------->AHL20(2)     <---------ANAC46 ---DOF2 <---------MYB59       <---------MYB52(1)<------NtERF2       <---------YAB1       --------->ARR11(3)   aatagtgaagacctaaactcagtttaactattcgttattgggccggtgggccgaaaaaaaaaaaatcaatttttattctttgggcttgtaaatgtcttgg  18179800                                       --------->ARR14(2)                                       <---------ARR14(2)                                 <---------ZAT2                                 --------->ZAT2                              <---------LBD16                              ------>ZmHOX2a(2)                            --------->ARR14(2)                   <---------TOE2(3) ----TOE1(2)                <---------ARR14(2)                   <---------TOE1(3) -ANAC58                --------->MYB52(1)                    <---------MYB52(1) -ANAC58         ----------->GT1--------->LBD16             <---------YAB1------->TEIL         <----- -ANAC46     --------->ATHB12<------ZmHOX2a(2)        <---------YAB1     <---------CCA1(2)  <--------   gtttggattttggtttcattggaaaaaaacgatccggctcggatttgatcactgtttttattctgttagggttttgtatctagcctaggtgattctttta  18179900                                                   <---------CCA1(2)                <---------DEAR3(1)                                                 --------->YAB1                    <---------At4g35610                                                <---------YAB1           <---------ANAC46                                              --------->YAB1          --------->GLK1(2)<---------ANAC58                                          <---------YAB1             --------->ARR14(2)<---------ANAC46                                      <-----------TGA1               <---------GLK1(2)<------NtERF2<-                                     <---------bZIP60(1)        --------->ZAT2     <---------ZAT2  <- <---------ATHB12    --------->ICU4  --------->bZIP60(1)        <---------ZAT2     --------->At4g35610 ------GT1        <---------AHL20(2)<-----------STF1<-----------ARR10<---------ARR14(2)<---------ANAC58 --DOF2      ----------->GT1     ------->TEIL--------->ICU4--------->ARR11(3)    <---------RAP2.6(2)   ctaatcaaacacaagtggatataattttgaagatgaatctcgtcaccattatcatatctaagctctagctggattctgtgtgttcggctgcgtttgcatt  18180000        --------->ALFIN1                                                                  <---------ANAC46        <---------ZAT6               <------------CBF          <----------ID1             <---------ANAC58 --------TOE1(3)         <---------ARR11(3)                  <---------------AtSPL8       <---------ANAC58 --------TOE2(3)         --------->ARR11(3)            --------->ANAC46            <----------DOF2   tgaggttgaagtgttagtaatctcaaggatttttagcaaaattgatgtctctgttaaacgaaaatggaacaaaaatggtatgtttctttgtttcgtctat  18180100                                                                <---------TOE1(3)               <----------DOF2                                  <---------TOE2(3)          --------->GLK1(1)                                  <---------REM1(1)          <---------GLK1(1)                                <---------MYB46(3)                     ===         <---------GLK1(2)         <----------DOF2        <---------DEAR3(1)                   ======     <---------HSFB2a(2)           <---------DAG2         --------->ALFIN1           <---------ANAC46     --------->HSFB2a(2)     <---------At4g35610          <---------AtMYB61    <---------TOE2(3)  <--     <---------LBD16         --------->At4g35610     --------->GLK1(2)    --------->GLK1(1)    <-----   gttttttctcggaatccctttcattgttttcttctgactttttttttcacagcaaaatcggtggtgaaggtttgagaaatcgaggtttagtgaatgagga  18180200                  ----------->HVH21                ----------->RAV1(2)                <---------ANAC58                <---------ANAC58            --------->At4g35610            <---------At4g35610                             --------->GLK1(2)           --------->MYB52(2)                <-----------HVH21     <------ZmHOX2a(2)           <---------At4g35610       <---------GLK1(2)   <------ZmHOX2a(1)          <---------At4g35610        ------->GAMYB  --------->ZAT6 ===========HOX2a_HOX2a     <---------ANAC58 <-----------TGA1       <---------WOX13(1) ===========HOX2a_HOX2a     <---------ANAC58--------->bZIP60(1)   --------->ATHB12 ----ZmHOX2a(1) <---------ANAC46 --------->At4g35610  ----------->RAV1(1)     <---------ZAT6      --- -ZmHOX2a(1)<-------GAMYB   <---------ANAC46<---------bZIP60(1)  <---------YAB1                   <--   ggacaggatcagtgagttgcctgaagcgttgcttctgctcatattgtcgtcacttccaacagaaactgtgattgccactagtgttttgtctaaacaatgg  18180300                                                        <-----------GT1                                                     <---------YAB1                                                   <--------HAHB4                                                   --------->YAB1              <------MYB83                         <---------ICU4              <------MYB46(1)                     <---------YAB1             --------->MYB111(1)                <---------ICU4             --------->MYB111(2)               --------->ICU4                      <----------DOF2             --------->ALFIN1                  <---------YAB1                   --------->ARR11(3)    <----------DOF2  <---------CCA1(2)       <--------HAHB4           <---------TOE2(3)          ---- ------>GLK1(1)   <------NtERF2              --------->YAB1          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -------GLK1(1)  ------>NtERF2              <---------YAB1        <---------At4g35610           -----   aaatctctttggaagttggtgccaaatctcaagtttgattctaagtatcattatcattatacgttttcagataatgttttcaggtctttgatttcacata  18180400                                                                                               ------                                                                                               <-----                                                                                               <-----         --------->HSFC1(1)                                                                 ------->MYC3         --------->HSFB2a(2)                                                                <-------MYC3         <---------HSFB2a(2)                     <----------DOF2                       ------>NtERF2         >>>>>>>ZML2                     <------ZmHOX2a(1)           <---------WOX13(1)--------->LBD16    ------>ZmHOX2a(1)                  <---------TOE2(3)           --------->ATHB12   --------->ANAC46  ----------->RAV1(2)                --------->CCA1(2)            <---------YAB1      --------->ANAC58 ----->DAG2                         --------->ARR11(3)        --------->ARR11(3)      --------->ANAC58 ----->DOF2               ---------->DOF2--------->YAB1<---------MYB46(3)            <---------LBD16   aagctcctgttctagatagtttgcatttgaaagttgaagataaggatgatgctttggatgttgggatattgattggaattgcattttcccgccatatgcg  18180500                                                          <---------REM1(1)                                                        <---------ANAC46                                                        <------MYB83                      <---------ANAC58     <---------GLK1(1)        ----------->GT1                    --------->GLK1(1)                      <---------ARR11(3)  <---------------AtSPL8                  <---------ARR11(3)          -------->HAHB4  <---------------AtSPL3     ---------->DOF2            <------MYB46(1)           --------->ARR11(3) ----->GT1            <---------ANAC58    --------->ARR11(3)          --------->YAB1 ----ANAC58    <-----------GT1    <----------DOF2    <---------ANAC58--------->ICU4 ----ANAC58 <---------ICU4  <------ZmHOX2a(1)        <---------ANAC58<---------YAB1              <---   taaatttgtactgaaaattacattgctggaggaaagctttgtaagatttccgagtgcttggtgtagttgtaatgatacacttgaaatcttggaactcaag  18180600  Previous    Next  AGI:  At3g49020.1    Description:  F-box family protein. Identical to FBD-associated F-box protein At3g49020 [Arabidopsis Thaliana] (GB:Q9SMT9); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G04230.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 18180064    to: 18181645    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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