Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->ICU4                               <---------ANAC55(2)                               <---------ANAC46                               <---------YAB1                         <---------YAB1 <---------YAB1                        --------->AHL20(2)                      <---------ANAC46 <-----------GT1        <---------AHL20(2) <---------YAB1   <---------ARR11(3) --ARR11(3)        --------->ICU4    <---------YAB1         --------->ARR11(3)            --------->AHL20(2) ->ARR11(3)      ---------->DOF2  ------->TEIL              --------->GLK1(2)      >>>>>>>>>TAC1  ---   agtttaccttgttatttgttaaagattaaaattatgtatatgattatgaatagaaatacaaaaatctcgtatagatgaaaacgacagtgttttaaaatat  18173300             --------->At4g35610                                         <------NtERF2             <---------At4g35610                                        <-----------HVH21            ------->TEIL                                                <---------RAP2.6(3)       --------->YAB1                                                  --------->RAP2.6(2)          <      <-------TEIL  --------->DAG2           ----------->GT1           --------->ANAC46             < ------>ANAC46     ---------->DOF2     ------>ZmHOX2a(1) <---------ARR11(3)                     -----   aagtcatattcatgaagctgaaaaagtcattttccattctcctaactaagtaaaaacatggtcttcatgtaagccgtcacatacaaatacaatagaagaa  18173400                                               <--------ATHB1                                               --------->ATHB51                                               --------->ATHB12                                               <---------ICU4                                               <------------ATHB5                                               -------->ATHB1                                               --------->YAB1                                              <---------ATHB12                                              --------->ICU4                                       --                                              <---------YAB1                                      <--                                            --------->WOX13(1)                        --------->AHL20(2)                                           ------------>ATHB5                         <---------AHL20(1)          <---------MYB46(3)        ----------->RAV1(2)                <---------ANAC58      <------- ------MYB46(1)                     --------->At4g35610                <---------ANAC58<---------AHL20(2) ------MYB83---------->ID1          <---------At4g35610--------->KAN4(2)              <---------AHL20(2) ---->GLK1(2)                   <-----------HVH21  --------->YAB1<-------TEIL  --------->ZAT6<-------   tttggtttgtgtttgttcttcttaagtagagcattgtcatctggcccaatcattgaaaattctcaagtacatttcgttccatcactaattttttttcttg  18173500                                                                    ------>MYB83                            ----------->HVH21                       ------>MYB46(1)                 <---------AHL20(1)                         --------->YAB1                ----------- ------->WRKY18(1)<---------AHL20(2)                       --------->AHL20(2)   ----------->GT1 ---------HVH21  <---------AHL20(2)                        <---------AHL20(2)  ----------->GT1  <---- --ANAC58        --------->AHL20(2)                  ----------->RAV1(1)   <---------TOE2(3)    ----- --ANAC58        --------->AHL20(1)              --------->ANAC46 --------->TOE1(2)<---------AHL20(2)   ggtcaaaccatacattcaatttattagggcctgataggcccaaacttctctaggccaacaattaataacctacaattagggatgttaaaatgggctaaat  18173600        <------NtERF2       <---------ATERF1(1)                       <------MYB83       <---------SPL7                            <------MYB46(1)       ------>NtERF2                            <---------DEAR3(1)       <---------RAP2.6(3)                      --------->MYB111(1)       <---------DEAR3(2)                       <---------MYB46(3)      <---------DEAR3(1)                        --------->MYB46(2)            <-------TEIL      <---------ATERF1(2)                       --------->MYB55(2)         <------MYB46(1)      --------->DEAR3(1)                        <---------AtMYB61          <------MYB83      --------->ATERF1(2)                       --------->MYB111(2)       <---------MYB46(3)      <---------RAP2.6(2)                      <--------P                <---------ANAC46      --------->RAP2.6(2)     ---------->DOF2  <---------MYB55(1)   <------------CBF >GT1--------->RAP2.6(3)    XXXXXXXXXXXXXXXXXXXX>MIR852         --------------->AGL15  <---------GLK1(2) -----AHL20(2)       ----------->TBP          <-------GAMYB     <---------------AGL15 *TSS ---->AHL20(2)    ------>ZmHOX2a(1)       <---------LBD16    <---------YAB1<---------DEAR3(2)   atttaaggccggcccgagtccttataaaaaacaaaagccctagccctgggttggtgttttcttatacttatattggtgggttcatgttagattatcgaaa  18173700                   ------>ZmHOX2a(2)                 <---------ARR14(2)                 --------->ARR14(2)              --------->ALFIN1            --------->ALFIN1           ------->MYC2           <-------MYC3           ------->MYC3             <----------DOF2               <----------DOF2           <-------MYC2        --------->AHL20(2)                 <---------DAG2          <---------TGA1a      <---------AHL20(2)           <---------ANAC58          =====================================bZIP_DOF     <---------ANAC58   <---------ARR14(2)      --------->ICU4              --------->ATHB12                      <-------   --------->ARR14(2)  ----------->GT1                <---------YAB1                       --------->ATHB12   ttttggattcgaacgtgtggatcgctggaaaaattaaactttagggtcgctagattacgattgcttcgctttttagtagtagtaggctacaatcgattgg  18173800                                      <---------At4g35610                                   <---------ZAT14                                   <---------At4g35610                                   --------->At4g35610                           ---------->DOF2                          --------->WRKY18(1)             --------->ANAC46      --------->ZAT14                            <---------GLK1(2)          <---------ARR14(2) --------->ANAC58                              <---------WOX13(1)          --------->ARR14(2) --------->ANAC58   --------->REM1(1)        <---------MYB46(3)  <---------ARR11(3)      <---------MYB52(1)<---------At4g35610          --------->ATHB12  --------->ARR11(3)     <-----------HVH21  --------->At4g35610         <---------YAB1 --WOX13(1)--------->RAP2.6(3) <---------ARR11(3)  <---------ICU4    ------>ZmHOX2a(1)   caaacatctctatatcggccataactccgtcaagctctgcagaggctgcttcatcagtattgagagacttcctggtgattgattctcatgtctatgtctg  18173900                                                <---------MYB52(1)                                               <-----------HVH21                                             --------->ATERF1(1)                                             <------NtERF2                         --------->YAB1     <---------ATERF1(1)                       <---------ARR11(3)   ------>NtERF2                      <---------CCA1(2)    <---------ARR14(2)                --------->DEAR3(1)         --------->ARR14(2)              ------>NtERF2               <---------At4g35610             --------->ANAC46          --------->RAP2.6(3)         --------->GLK1(1)             --------->ANAC58   --------->ORA47(1)      --------->At5g28300             --------->ANAC58  --------->DEAR3(1)      ----------->GT1   ----------->RAV1(2) --------   agtttggcattgtctacgccatccatatcatcaccgtccaattcggctccgtcgtctcggtaaattgagaaacccttctgagacttgtgttgaatttata  18174000                                                                        =============================                                                                        --------->ANAC46                                                                        <---------TGA1a                       <---------ANAC58                                 <---------O2                       <---------ANAC58                                 --------->ANAC58                       <-------GAMYB                                    --------->ANAC58                     <---------AtMYB61                    <------ZmHOX2a(1)                <------MYB46(1)                       --------->MYB52(1)--------->O2                <------MYB83                          ============================bZIP_DOF            <---------ARR14(2)                        ---------->DOF2   --------->TGA1a             <            --------->ARR14(2)             <---------ARR11(3)   ==================bZIP_DOF          -            ------->TEIL   <---------HSFB2a(2)     --------->ANAC46  ------>ZmHOX2a(1)    --------->At4g35610 ->YAB1<-----------GT1<---------MYB46(3)   --------->ARR11(3)   <----------DOF2           <---------At4g35610   atctctgtataacgaatttggttttggttgcagaaagtttgtgaatgtcttctacgtaaaggacctctttcctcacgagacatctctcgtttagctgaat  18174100              ---------->DOF2        --------->YAB1        --------->TOE2(3)        --------->TOE1(3)        --------->AtMYB61<---------RVE1(1)                                             --------->MYB52(2)      -------->P         <---------CCA1(1)                                           <--------P     --------->WOX13(1) --------->ARR14(2)                                        --------->LBD16 --------->GLK1(1)      <---------ARR11(3)                                        ------>ZmHOX2a(1) ==============MYC_MYB  --------->ARR11(3)                      <----------DOF2 ----------->RAV1(2) ---------ARR11(3)   <---------TOE2(3)        --------->At4g35610           ------->TEIL -------->ARR11(3)  ---------->DOF2           <---------At4g35610          <-----------GT1   cagatatcaaccataacaaagttaaagatattctctatctcttgattcagcacaattgtgttcaagctttctccattgaacctcctggttagtctctata  18174200  Previous    Next  AGI:  At3g49000.1    Description:  RNA polymerase III subunit RPC82 family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO15472.1); contains InterPro domain RNA polymerase III subunit RPC82-related, helix-turn-helix (InterPro:IPR013197); contains InterPro domain RNA polymerase III Rpc82, C -terminal; (InterPro:IPR008806) Range:  from: 18173686    to: 18176971    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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