Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->ANAC58                                                                          --------->ANAC46                                                                        --------->ANAC46                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                    --------->AtLEC2                                                                ------>MYB46(1)                                                                -------->P--------->ANAC58                                                              <---------MYB111(2)                                                              --------->DEAR3(1)                                                              <---------MYB55(2)                                                              <---------MYB111(1)                                                              <---------MYB46(2)                                         <---------ZAT6       <---------ALFIN1          --------->AHL20(2)                                         --------->ICU4       --------->AtMYB61   <------ZmHOX2a(1)          <---------ARR11(3)         <---------ZAT14          --------->MYB46(3) ----------->GT1 <---------ANAC46                    --------->ZAT14         --------->MYB46(3) ----------->GT1 ---->GT1 --------->ARR11(3)   ------->TEIL               --------->MYB46(3) ------>MYB83 -->YAB1 <---------CCA1(2)  <---------ATHB12     <----------DOF2------>MYB83 ------>MYB46(1)      ---   attatgtgtatatatctgtaggctatgccaatgaatgtctgtagtgatcaacttttgatcaccaccaaccttgcacaccaaataggaaaataaaacaata  18140200       <---------AHL20(2)       --------->ATHB12       --------->ATHB51       --------->AHL20(2)       -------->ATHB1         <---------YAB1       <--------HAHB4       --------->ATHB12       <---------ICU4       <---------ICU4                   <----------DOF2      --------->ICU4        <--------HAHB4                  <---------DAG2                -----------      <---------ATHB51      --------->ATHB51              -------->P                <---------YAB1   <---------YAB1          <---------YAB1                 ------->TEIL        <---------ARR11(3) <-----------GT1           --------->ICU4              --------->At4g35610    --------->ARR11(3) -------->GT1           <---------YAB1              <---------ATHB12         <---------CCA1(2)    <--   ttgttacaattatttgtcttgatattagcattattagtcacatttgttttgcaaatcatctaccttttttttttggtctatatcttattcttcttagttc  18140300                            <-----------TGA1                           --------->ANAC46                         <---------DOF5.7(2)                      <---------DOF5.7(2)                   ----------->RAV1(1)                         <---------ANAC55(2)                   --------->RAP2.6(2)                         --------->ANAC55(2)                  --------->ATERF1(2)                          <------MYB46(1)                  <---------ATERF1(2)                         --------->MYB46(2)                 --------->ATERF1(1)                          --------->MYB111(1)                ------>NtERF2                         --------->AtMYB61   ------>MYB46(1)<---------DEAR3(1)                  <---------ALFIN1   -------->P   <---------ATERF1(1)                 ------>NtERF2 --------->MYB52(1)   --------->MYB52(1)    --------->MYB52(1)       --------->MYB46(3)   ------>MYB83<---------DEAR3(1)                <---------At4g35610  --------->MYB55(1)   --------->DOF5.7(2)  --------->ZAT2    --------->MYB59 <---------MYB111(1)  <----------DOF2       <---------ZAT2  <---------MYB52(1) <---------MYB111(2)<------NtERF2      <-----------GT1--------->ZAT6 <---------MYB59<---------RAP2.3(1) <----------DOF2--------->RAP2.6(2)    --------->ARR11(3) <---------MYB46(2)------>NtERF2   <---------MYB52(1)--------->MYB46(3)   --------->AHL20(1) ---------->WRI1--------->LBD16------>NtERF2<---------At4g35610<------MYB83    --------->TOE2(3) ---------GT1 <---------LBD16 <---------ALFIN1   --------->At4g35610      <---------ARR11(3)   ttacctaccagtcttctccggcggcattaacgacaccgttttatcgagctcagccaccactagttaggtaacgatatatattcttaaaaacgtttagaaa  18140400                                 <---------AHL20(1)                                 --------->AHL20(1)                               <---------ARR11(3)                               --------->AHL20(1)                                                   -                               <---------AHL20(1)                                                   <                               --------->ARR11(3)                                                   <                          ----------->GT1               <---------ICU4<-------GAMYB                 <                 --------->ANAC58<---------ARR11(3)    <---------YAB1----------->GT1                <                 --------->ANAC58--------->ARR11(3)    --------->ICU4<---------ZAT6                 <       ------->TEIL     ---------->DOF2           ------->GAMYB<---------ATERF1(1)             <-----  --------------------->WRI1--------->AHL20(2) --------->MYB52(1) ------>NtERF2   ----------->GT1   -   atttctatgtatgtttcacacgaacaaaaagaaaatatttttcagacatcaacggtcattatggacgacgactgttaaacaaaatcgtttaaaattcttg  18140500                                                   <---------AHL20(2)                                                <---------AHL20(2)               <---------AHL20(1)              --------->AHL20(2)        <-----------GT1                     <---------CCA1(1) ---------->GT1<---------AHL20(2)   <------------CBF ---------ANAC55(2)            <---------------AGL15 ---------ANAC46               --------------->AGL15        <---------AHL20(2) ---------ANAC55(1)      <---------AHL20(2) <---------RVE1(1) ---------ANAC58    <---------AHL20(1)     <---------ARR11(3)                           --------->AHL20(2) ---------ANAC58    <---------AHL20(2)     --------->ARR11(3)               <---------AHL20(2) ------RAV1(1) --------->AHL20(2)  --------->DAG2----------->TBP           --------->AHL20(2)       - -------->ANAC55(2) --------->AHL20(2)     <---------ARR14(2)        ------>ZmHOX2a(2)*TSS     ------   ttgcgtaatttgaccattttattttattttataccaaaaattgaagatattatatatatgttttaattcgatcgcaaataaatctgaaaattaaaacaca  18140600                                                                                                   --                                                 --------->YAB1                                  ----                                                 <---------ICU4                                <<<<<<                                                <---------ATHB12                            ---------                                       <---------ANAC58       --------->ARR14(2)            <--------                                       <---------GLK1(2)      --------->ICU4                <--------  <---------MYB52(1)            --------->HSFB2a(2)           <---------ARR14(2)            --------- ---------->GT1                 <---------HSFB2a(2)<---------YAB1                       --------->YAB1 --->ANAC46            <----------DOF2 <---------ANAC58   <---------At4g35610        --------->WOX13(1)   aaacgttactcttctctctcattctctttcgcttctcgatagcttctcaaatcatggttcagcaaatatgggagacgttgaaggaaacaatcacagctta  18140700                                                                                                    -                                                                                                -----                                                                                                -----                          --------------->AtSPL3                                               ------                          --------------->AtSPL8                                              <------             ----------->RAV1(2)                                                              -------     <----------DOF2     <---------At5g28300                                                  ------- <---------ZAT18        <-----------GT1                                                       ------- --------->ZAT14 <---------ANAC58                                                             ------- <---------ZAT14 <---------ANAC46                                                             ------- ------->ANAC46  <---------ANAC58                                                            -------- ----->ZAT6  --------->ZAT2                                      <---------LBD16          --------->ZAT14 <<<<<<<<<<<LFY <-------TEIL   <---------ANAC58    --------->WRKY38(1)                    <---------ZAT14 >At4g35610  <---------At4g35610                   --------->WRKY12--------->LBD16  ------>ZmHOX2a(1) -At4g35610  --------->At4g35610          <----------DOF2     --------->ATERF1(1) ----------->RAV1(2) -ZAT2       <---------ZAT2 --------->ZAT14       <---------MYB52(1)<---------MYB52(1)    --------->ZAT18 >ZAT2     <-----------RAV1(2) <---------ANAC58   --------->DOF5.7(2)             <---------LBD16   -   cactggactttctccagctgcgtttttcaccgtacttgctctcgctttcgccgtttaccaagtcgtctccggtttcttcgtttctcctgaagttcaccga  18140800                                                  --------->ZAT2                                                  <---------At4g35610                                                  --------->At4g35610                                                  <---------ZAT2                                               <-------TEIL     <----------DOF2                        <---------MYB46(3)    --------->MYB52(2)                      <---------DEAR3(2) -------->TOE2(1)                        --------->ABI4(1) ->MYB46(1)                              ------>NtERF2 ->MYB83                                --------->DEAR3(1) --->ORA47(1)                           --------->DREB2C(2) ---MYB46(2)                            ------->GAMYB -->DEAR4(1)                            <---------ALFIN1 -->DREB2C(2)                          --------->DEAR3(2)                         <---------DAG2 -->DEAR3(1)                           --------->MYB46(3)                         <----------DOF2 --- -->MYB46(3)                 ------>NtERF2 <---------DEAR3(1)             --------->At4g35610    <--- ---->HVH21                 --------->ARR14(2)<-----------HVH21         <------ZmHOX2a(1)     <------NtERF2 ->DEAR3(2)   <-------TEIL  <---------ARR14(2)--------->ARR14(2)      --------->ALFIN1 --------->YAB1 -------->TOE1(1)  --------->TOE2(3) <---------ALFIN1                <------ZmHOX2a(1)<---------YAB1   cctcgttctttggaggttcagcctcaatcggagcctcttccaccgccggttcagctcggagaaatcactgaggaggagcttaagctttatgatggctccg  18140900                                                                                                  <--                                           <---------YAB1                                       -----                                     ------>ZmHOX2a(2)                         <---------ANAC58<-----                                    <------ZmHOX2a(2)                      <----------DOF2   <-------                                   <---------ARR14(2)                     <---------ICU4 <---------AHL20(2)                                   --------->ARR11(3)                   --------->ARR11(3)   --------                                   --------->ARR14(2)                   <---------ARR11(3)  ---------                                   <---------AGP1                      --------->GLK1(1) <---------AHL20(1)                                   <---------ARR11(3)           <---------ANAC46         --------->AHL20(2)    ---------->DOF2                --------->AGP1               <---------ANAC58         --------->AHL20(1) ------>GLK1(2)                   <---------CCA1(2)             <---------ANAC58        --------->AHL20(2) ------GLK1(2)          <------ZmHOX2a(2)--------->YAB1   <---------MYB52(1)   <---------ANAC58------   attctaaaaagccccttcttatggcgatcaagggccagatctatgatgtttctcagagcaggtatttcttgtgaaatctttacttgttcattaaattatg  18141000                                                                                           <---------WRKY18(1)                                                                                          --------->WRKY12                                                                                    <---------ICU4                                                                                    --------->YAB1                                                                             ----------->GT1                                                                             --------->MYB52(2)                                                                           <--------P <---------YAB1                                                                           <---------MYB52(1) -------WOX13(1)     --------->AHL20(2)                                 --------->MYB59--------->ATHB12 ---->ATHB12        <---------AHL20(2)                                  <---------TOE2(3) --------->WRKY38(1) ----YAB1        ----------->GT1    <-----------GT1           --------->CCA1(2)    <---------ATHB12 --ICU4      --------->ZAT6     --------->YAB1               --------->ARR14(2)    --------->ICU4 ->YAB1   --------->YAB1     --------->ANAC46             --------->HSFB2a(2)--------->MYB46(2) >ICU4    <---------ICU4    --------->ZAT6         <---------ATHB12     <---------TOE1(3)<---------WOX13(1) --->ICU4<---------ATHB12<-----------GT1       ------->GAMYB <---------ARR14(2)  --------->WOX13(1)   attgaatccaaatgatcactagttaaattaccagtaataaacgattcaacccaatagtttcgagatttggggtttaggttagttaatcatggttgactgt  18141100  Previous    Next  AGI:  At3g48880.1    Description:  F-box family protein. Identical to F-box/LRR-repeat protein At3g48880 [Arabidopsis Thaliana] (GB:Q9M2Z5;GB:Q8L8M6); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G11580.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62210.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 18137947    to: 18140174    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g48890.1    Description:  ATMP2 (MEMBRANE STEROID BINDING PROTEIN 2); heme binding / transition metal ion binding. Identical to Putative steroid-binding protein 2 (MP2) [Arabidopsis Thaliana] (GB:Q9M2Z4;GB:Q9XFM5); similar to MSBP1 (MEMBRANE STEROID BINDING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT5G52240.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62209.1); contains InterPro domain Cytochrome b5; (InterPro:IPR001199) Range:  from: 18140586    to: 18142558    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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