Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->YAB1                                                                            --------->WOX13(1)          --------->At4g35610                                            --------->ANAC58       ---------->DOF2                                                   --------->ANAC58   ------>MYB46(1)                                                       --------->ANAC46   ------>MYB83                               <---------CCA1(2) --------->ANAC58 --------->MYB46(3)       ---------->DOF2   <---------ANAC58    --------->ANAC58 <---------YAB1    -- ---------GT1       <-----------HVH21       <---------ANAC58  ---------->DOF2 <---------ATHB12     --   tcaccaactaagagcagaacaatgtcacaaaagcttgagctatgtttcttatctccaaactctccaaagcaaaacaagcaatcatctttgaacaaatcga  18137200             --------->TOE2(3)                                        <---------ARR14(2)             --------->TOE1(3)                                        --------->ARR14(2)             ------->GAMYB                                      --------->ZAT18         --------->ANAC46                                   <---------------AtSPL8       --------->ANAC46                                  ---------->DOF2<-------TEIL    --------->ARR14(2)      --------->ANAC58            --------->AHL20(2)    <---------ARR14(2)      --------->ANAC58          ------>MYB83----------------->AGL3          --- ------->ANAC58       ---------->DOF2          --------->AHL20(2) ----------------->AGL2        ----- ------->ANAC58    --------->TOE2(3)  <---------AtLEC2------>MYB46(1) <---------GLK1(2)     ---------   aacgcgaatacacaaccctaatctcaaagtaagcatttttgcatatcaataaaaccaaataaagagtacccagattcagaaaactcaaaatgaaaccacc  18137300               ------->GAMYB               --------->ANAC46                                       ------->GAMYB               --------->ANAC58                                 --------->ANAC46               --------->ANAC58                                 --------->ANAC58             ------>MYB46(1)                                    --------->ANAC58            --------->MYB55(1)                               <---------ZAT18--------->At4g35610     --------->ANAC58                                      --------->At4g35610     --------->ANAC58                             <----------DOF2  --------->MYB52(1)   --------->MYB52(1)                            --------->TOE1(3) ----------->RAV1(1) ---------->DOF2 ------->DOF2--------->MYB52(1)     ----------->GT1        --------->ZAT2---------->DOF2            < ---->AtMYB61------>MYB83  ------------------------>ANAC81 <---------At4g35610      --------->TOE1(3) >MYB46(3) --------->AtMYB61      ---------->DOF2--------->TOE2(3)--------->ANAC46  --------->TOE2(3)   aaaagaaacgaaaccaaacgccatgagaaatagaagaaaagaaaaactcaacctttaaaacagctcacacaacagagaagcagaaacctaaaagcttctt  18137400                                                                     ----------->GT1                                                                 ---------->DOF2    ---------->DOF2                           --------->AHL20(2)          <---------ZAT14        --------->ALFIN1      <              ----------->RAV1(1)                     --------->ALFIN1  <----------DOF2  ---------->DOF2 ---------ATHB12--------->MYB46(3)        ---------->DOF2   ---------->DOF2 <---------ANAC46 --------   caatgaaacacaacaacaacaaatgaaaaataaaaacagactgagaaagagagtgagtgtagcaaagaaaagggttttatgtgtagcaaagaaaagggtt  18137500             <----------DOF2          ------>NtERF2         --------->DEAR3(1)         --------->ANAC46       <---------ATERF1(1)      <---------DEAR3(1)      <---------ETT(2)                                                                 --------->ANAC58      --------->DEAR3(1)                                                               --------->ANAC58      --------->ETT(2)                                           --------->CCA1(2)   --------->CCA1(2)      --------->WRKY12                                    ---------->DOF2           --------->ARR11(3)      ----------->HVH21                            --------->ATHB12 <------ZmHOX2a(1)--------->GLK1(1)    <-----------HVH21                           <---------------AGL15               <---------ARR14(2) <---------At5g28300                           <-----------------AGL3         >>>>>>>>>TBF1   ------- -----------GT1                   --------->DAG2--------------->AGL15---------->DOF2<---------ARR11(3) --->GT1--------->ATERF1(1)      ---------->DOF2<----------DOF2--------->CCA1(2)    --------->ARR14(2)   ttataccgtcgacgcctttggatagcgaagttggagaaagcgagagactccttttattgggaaagagataggaaagtgaagaagaagatacccaagagac  18137600                                            <------NtERF2                                           ------>NtERF2                                          --------->RAP2.3(2)                                          --------->RAP2.3(3)          ------>MYB46(1)                                          --------->DEAR3(1)           -------->P                                          --------->RAP2.6(2)          ------>MYB83                                         --------->DEAR4(2)           --------->MYB55(1)                                         --------->ATERF1(1)         <---------MYB111(2)    <--------                                         --------->ORA47(2)          <---------MYB55(2)    <---------RAP2.6(3)                                         --------->ERF1              <---------MYB111(1)------>MYB83                                         --------->RAP2.3(1)         <---------MYB46(2) ------>MYB46(1)                                        <---------ATERF1(1)          --------->MYB46(3)--------->ANAC46      <-----------GT1             --------->ANAC58              --------->ANAC58      --------->MYB46(3)   <---------GLK1(1)     <---------ARR11(3)--------->ABI4(1)    --------->ANAC46 <---------ANAC58   --------->GLK1(1)   *TSS       --------->ANAC58      --------->AHL20(2)---------->DOF2 <---------MYB46(3) -->CCA1(2)           <----------DOF2  --------->DEAR3(1)       --------->ANAC58 <---------ANAC58   aagagatttctctattctctctctctttatcttctctcgcatcgccgcccttcatagattaaacacactcacctaccaaagttgcataccagccgttaga  18137700                                  <---------DAG2  --------->TOE2(3)                                  <---------------AGL15     --------->GLK1(2)                                  <----------DOF2 --------->TOE1(3)          --------->MYB52(1)  --------->YAB1   <-----------HVH21          <---------WRKY12            --------->YAB1 <---------------AGL15            --------------->AGL15     --------->ARR11(3) --------------->AGL15      <-----------GT1   <---------WRKY38(1)    <---------HSFB2a(2) =================================================MADS_MADS<---------GLK1(2)--------->CCA1(2) -MYB52(1)        --------->DEAR3(1)   ---------->DOF2  --------->YAB1 ---------->DOF2     <---------ANAC46   ttactcataagtgtattccaccgtcggatttaactactttttaaagagtcaacctcaataagaatcttgttcccaaagataagggtttgtgttgagttta  18137800                                    --------->MYB52(1)                                    ------>MYB46(1)                                  <---------MYB59                                  --------->AtMYB61       <-------TEIL                              -                            --------->AtMYB61        --------->AHL20(2)                   <----------                          >>>>>>>>>>MYB80      --------->YAB1               <---------MYB52(1) <-----                     --------->LBD16------>MYB83     <---------AHL20(2)    <------------CBF    ------  ----------->GT1    <-----------HVH21        <---------YAB1 <---------CCA1(2)            <---------GLK1(2)   agaccggtttaatctgaaaactccgtcaaaccaaaaccaaaccgatttatcataaaaaaattcatatcatctacttccattggctagagacagattgtaa  18137900           <------NtERF2                  <-------TEIL        <------NtERF2                  --------->HSFC1(2)        --------->ATERF1(1)            --------->HSFB2a(1)       <---------ATERF1(1)             <---------HSFB2a(1)     <------NtERF2                     <------MYB83                           <---------GLK1(2)   --------->bZIP60(1)                 <------MYB46(1)                       --------->At4g35610   <---------bZIP60(1)                 <---------HSFC1(2)           --------->ANAC55(2)   <---------ANAC46                   --------->MYB111(1)           <---------ANAC46         ------>ZmHOX2a(2)  <------NtERF2                       --------->MYB46(2)            <---------ANAC58       --------->ARR11(3) -------->ALFIN1                      --------->MYB59               <---------ANAC58       <---------ARR11(3) --CBF<---------DEAR3(1)             <--------P                     <---------ANAC55(1)  <---------YAB1 ------GT1------>NtERF2        ------>ZmHOX2a(1)                <----------DOF2      <----------DOF2 --->MYB52(1) --------->MYB52(1)---------->DOF2*TSS        <---------ZAT18   <---------At4g35610   cggtgtcgtcgtcgccaaacgatttgcctcttcctaaaggtaggttcttcatttctctcagtgcccctttgcgtgtttcagcttcttctttatgatctaa  18138000                                                             ------>ZmHOX2a(2)                                                            <------ZmHOX2a(2)                                                           <---------AGP1                                                           --------->AGP1                                                           <---------ARR11(3)                                                           --------->ARR11(3)                                                           <---------ARR14(2)                                                    <---------ARR14(2)   <---------MYB52(1)                                       ----------->GT1     --------->ARR14(2)            <---------ANAC58      <---------------AGL15   <---------GLK1(1)             --------->ATHB12            <---------ANAC46      ===================================================================            <---------ANAC58      --------------->AGL15 <---------HSFB2a(2)          <---------------   ttcatgtctatgtttcgtttgattctttgttcaattctgaattgagaaaatggcgattcgagatctgtctcttcggttttttagttcgactgatttggga  18138100  Previous    Next  AGI:  At3g48870.1    Description:  ATCLPC (CASEINOLYTIC PROTEASE C); ATP binding / ATPase. similar to CLPC (HEAT SHOCK PROTEIN 93-V), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G50920.1); similar to ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G51070.1); similar to CLPB-M/CLPB4/HSP98.7 (HEAT SHOCK PROTEIN 98.7), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT2G25140.1); similar to ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor (GB:P35100); similar to ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplast precursor (GB:P31542); similar to ATP-dependent Clp Range:  from: 18133183    to: 18137623    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g48880.1    Description:  F-box family protein. Identical to F-box/LRR-repeat protein At3g48880 [Arabidopsis Thaliana] (GB:Q9M2Z5;GB:Q8L8M6); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G11580.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62210.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 18137947    to: 18140174    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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