Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <----------DOF2          <---------ARR11(3)     --------->YAB1     --------->AHL20(2)     -------->HAHB4    <---------YAB1  <---------ICU4  --------->YAB1 <---------ATHB51 <---------AHL20(2) --------->ICU4 --------->AHL20(2)                          ----------->GT1 ---------AHL20(1)                  ----------->GT1      --------->ZAT6         --------->YAB1 ----->AHL20(2)                    <---------ICU4      <-----------GT1     --------->AHL20(2) ------AHL20(1)              ----------->GT1--------->DAG2              --------->YAB1 ------AHL20(2)       ----------->GT1     <---------AHL20(2)           <---------ATHB12 ----->AHL20(1)    ---------->DOF2--------->ICU4  <---------YAB1     --------->YAB1  ---------------- -ATHB12  --------->ARR11(3) --------->YAB1---------->DOF2           --------->WOX13(1)         -----   aaaataattatagacctttttaaaagataaatagtaattagtatataaagttatatttaacaatagtgtattaatcataaaatcaaaatactaaaaaaaa  18086400                                --------->YAB1                                -------->HAHB4    <---------AHL20(2)                               <---------YAB1     --------->AHL20(1)                 <---------AHL20(2)               --------->AHL20(2)           ------->GAMYB      <---------TOE2(3)  <---------AHL20(2)              --------->ANAC58        ----------->RAV1(1)  --------->YAB1      --------->AHL20(2)  ------->GAMYB -------->ANAC81--------->AHL20(2)      --------->YAB1 <---------AHL20(2)        --------->ANAC58 ---->AHL20(2)  <---------AHL20(2) --------->AHL20(2) --------->AHL20(2)     <-----------HVH21    ---   aaatcaaattcaacagaaataaatagcacattaatgataaaatcagaataattttattaaatcaaattcaacagcaatatgtcaccccaaaaactatata  18086500                                               --------->AHL20(1)                                 ------>MYB83  --------->ARR11(3)                                 ------>MYB46(1)                               --------->TOE2(3)            <---------YAB1                 <-------TEIL  <---------MYB59 <---------AHL20(1)           <---------ATHB12   ==============================MADS_MADS         --------->WOX13(1)   --------->ANAC55(2)         --------->AHL20(2)   <---------AHL20(2)         ----------------->AG        --------->YAB1  --------->AHL20(2)        <-----------GT1   --------->AHL20(2) <-------MYC3  <---------AHL20(2)   <---------YAB1       <---------------AGL15------->MYC3          ------>ZmHOX2a(1) ------>ICU4     <---------YAB1<---------MYB46(2)  ----------->GT1                    --------->TOE2(3)   cttattaatttcaatcagtttcattgtcatttacctaattagtttaaaatatatagaaaattataaacgtgtaatgtcaagactgattcctcaaaaaaaa  18086600                                                                 <-----------GT1                           <---------ICU4             <---------ICU4--------->TOE1(3)                           --------->YAB1             --------->ATHB12                           -------->ATHB1             --------->YAB1--------->YAB1                          --------->ICU4             <---------ATHB12                      --------->ARR11(3)                          <---------ATHB51           --------->ICU4 --------->TOE2(3)      <---------ARR11(3)                          <---------ATHB12       --------->AHL20(2)<---------YAB1         <---------GLK1(1)                    --------->ANAC46    ---------->DOF2--------->TOE2(3)  --------->ANAC46--------->GLK1(1)          ------->TEIL  --------->WOX13(1)----------->GT1     <---------ICU4              <---------CCA1(2)   aaacccttactgaatctattacacatcaattattctgtaacagaaagaaaaaaaaatcattaactaattaccataaactccattagaaactgatatcttt  18086700                                <--------HAHB4                                    --------->YAB1                                --------->ATHB51                                  <---------ICU4                              <---------------AGL15                               --------->ATHB51                              --------------->AGL15                               <--------ATHB1                 --------->DAG2 <---------ICU4                                   <---------ATHB12                ---------->DOF2--------->ICU4                                    <---------ATHB51           ----------->GT1  <-------TEIL                                       *TSS     <----------DOF2      <---------ZAT18    <---------At4g35610                                 ------------>CBF      --------->WRKY38(1)--------->At4g35610     --------->YAB1            --------->ANAC58         <      --------->WRKY12---------->DOF2<---------TOE2(3)     <----------DOF2 --------->ANAC58        <-   gaaattagttgactcgtaaaaagggaaagctgcattattaagaaacaaaaaacataattctctttctctgttccctcaagtcaataattccttttttgat  18086800                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                 <---------AHL20(2)                                                               ---                 --------->AHL20(1)                                                              ----                 <---------AHL20(1)                                                        --------->CCA1(2)                 --------->AHL20(2)                                                       <---------GLK1(2)              ------>MYB46(1)                                                <---------ANAC58    ----    <-----------GT1                                                  <---------LBD16      --------->ARR14(2) ---------AHL20(2)--------->ATHB12          ----------->GT1    <---------AHL20(2)       ----------->ARR10 --------YAB1 ------>MYB83       <----------DOF2        --------->ANAC46     <---------ANAC58    <---   ttttattttctaaaccaaatttattgctctgaagactttgtttgtgtagcaaaaaaaaacgcgattttttttctgggtttcttccgatgttagatttgca  18086900            <------NtERF2           <-----------TGA1                      <---------MYB46(3)           ------>NtERF2                        --------->ALFIN1       ------>ZmHOX2a(2)                        <---------AtMYB61       <---------DEAR3(1)                     <---------MYB46(3)      <------ZmHOX2a(2)                      <---------AtMYB61     --------->ARR14(2)            <------NtERF2<---------ANAC46     <---------ARR14(2)            <---------ABI4(1) <---------MYB52(1)               <---------RAP2.3(1) <------NtERF2                   <---------RRTF1(3) -----------HVH21                <---------RAP2.6(2)                                         <------- ---------RAP2.6(3)     --------->LBD16      <-----------RAV1(1)                             -------- ------->RAP2.3(2)     <---------ANAC46    --------->MYB52(2)                                <------- --------ATERF1(2) --------->At4g35610 --------->ALFIN1                                      <------- ------->RAP2.3(3) <---------At4g35610<------NtERF2                                  --------->ANAC58 ------->ATERF1(2) <---------ZAT2<---------RAP2.3(2)                                 ----------->GT1 ------>RAP2.3(1)  <---------GLK1(1)<---------ANAC46                     ---------->DOF2     <------- -->NtERF2 <-----------HVH21    --------->At4g35610            --------->YAB1        --------->ANAC58 ----->At4g35610   --------->GLK1(1)<---------DEAR3(1)   <---------At4g35610        --------->DAG2--- ------At4g35610   --------->ZAT2<---------DEAR3(1)      --------->At4g35610      ---------->DOF2 <--   gccgtcagatcggcgtcatggagctccgagtagtagcggcggtgttagtggtggtgatgagctgatcagaacttataaaggctggaaaggcaataacgtg  18087000                                                                                ------>ZmHOX2a(2)                                                                                =====================                                                                               ======================                                                                               <------ZmHOX2a(2)       <<<<<<<<<TBF1                                                          <---------ARR11(3)    <<<<<<<<<TBF1                                                             <---------AGP1 --ANAC58                           <------MYB46(1)                           <---------ARR14(2) ->ANAC55(2)                        <------MYB83                              --------->ARR11(3) --ANAC55(2)                    --------->ATHB12                              --------->AGP1   ------ --ANAC58    <<<<<<<<<TBF1     <---------YAB1                <---------AHL20(2)--------->CCA1(2) --ANAC46 <<<<<<<<<TBF1      --------->YAB1                 --------->AHL20(2)--------->ARR14(2) ------>At4g35610         <----------DOF2        <---------LBD16    <----------DOF2   --------->YAB1 -------At4g35610 <----------DOF2 <---------WOX13(1) <-----------HVH21      ----------->ARR10 -------   agcttcttcttcttcttcttctttatctcttttatgattggtttttgtttttctgggtcagatttaatgtctttgaataagatctgaatcaaaaatccta  18087100                                    --------->YAB1                                    <---------ICU4                                   <---------ATHB12            <------MYB83     <---------AtMYB61             <---------YAB1              <------MYB46(1) <----------DOF2                   --------->ICU4             <---------AtMYB61                    <- =HOX2a_HOX2a                    --------->YAB1               --------->MYB59             --------->ICU4 =HOX2a_HOX2a                   --------->ICU4 <---------MYB52(1)                    ----------->GT1 >ZmHOX2a(1)                    --------->KAN4(1)      <---------ANAC58   --------->HSFB2a(2)      <- -->TOE2(3)                    <---------KAN4(2)       <---------ANAC58   <---------HSFB2a(2)      <-   agcctttttggtggaattactcagaagttgtggaataatcattctctctgtttttttgctgggtttggtcatattttcagaagtttagagtaataagttt  18087200                                                     <---------ANAC58                                                     <---------ANAC58                            <------MYB46(1)        --------->GLK1(2)                            <------MYB83          --------->ARR11(3)            --------->TOE2(3)           <---------At4g35610 --------ANAC58            --------->MYB59    ---------->DOF2               <---------DAG2--------->ZAT6 --------ANAC58          --------->CCA1(2) <-----------HVH21    --------->YAB1    <---------TOE2(3) --------ANAC46       <---------TOE2(3)--------->ANAC46      <----------DOF2<----------DOF2   gacttgtatgtataccctaattttgagatttggtcttgtttacgctgtcaaagatgctggtctctttcaaaattagagctttttgatgtttaacacaagt  18087300  Previous    Next  AGI:  At3g48760.1    Description:  zinc finger (DHHC type) family protein. Identical to Zinc finger DHHC domain-containing protein At3g48760 [Arabidopsis Thaliana] (GB:Q9M306); similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT3G26935.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68344.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) Range:  from: 18086779    to: 18089276    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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