Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->ANAC58                                                      --------->ANAC58                                                    <---------ANAC58                                                    <---------ANAC58                                       <---------ALFIN1                        --------->ANAC46 --------->ANAC46         --------->At4g35610                        --------->ANAC58 --------->ANAC58      <---------MYB52(1)          <---------                        --------->ANAC58 --------->ANAC58    <---------MYB46(3)     <---------ARR11(3) --ANAC58              ------->GAMYB  <---------REM1(2)    <-------GAMYB            --------->ARR11(3) --ANAC58       --------->YAB1----------->HVH21<-----------RAV1(1)<---------At4g35610  <----------DOF2   cgtattgctacgactccatcatcaacacacaagtgaaggctacacacaaatgttgcgagccagttgttagcttcgaggtttaagaagttcttttatcgat  18045600                                                                      --------->AHL20(2)                                            --------->AHL20(2)     --------->TOE1(3)                   --------->YAB1           <---------AHL20(2)    --------->At4g35610     <------ZmHOX2a(2)                     --------->ICU4    <---------ICU4              <----------DOF2    <---------ARR11(3)         <---------YAB1<---------AHL20(2)   <---------At4g35610    <---------DAG2    --------->ARR11(3)     <---------GLK1(2)<---------AHL20(1)<----------DOF2  ---------->DOF2     -- --GT1            <---------ATHB12     --------->At5g28300  --------->ICU4--------->AHL20(2)   ------   ttgagagatcacaatgcccaataatccaaaattctccttgcagtaatttttttttttttgtaatctttagcttaaaataaacaaagctaagctttttgat  18045700                                                                    --------->AHL20(2)                                                                <---------ANAC58                                                                <---------ANAC58           --------->ZAT6                                    <---------MYB46(3)      <---------ANAC58   --------->AHL20(1)     <---------TOE1(2)              ----------->GT1         <---------ANAC58   <---------AHL20(1) ----->TEIL                  ---------->DOF2              <---------YAB1       --------->ARR11(3) --------->AtSPL8       ----------->GT1      --------->TOE2(3)  <---------ANAC46         <-----------GT1   gtactcgtatgtgtttgccatgtagtttgttaaaagagtggttataacataaacaaaattttgtttgcgtttatatatgaaaatattgttcttacactat  18045800                                                    --------->GLK1(1)                               <                                                --------->ANAC58                         ------->TEIL                                                --------->ANAC58               --------------->AtSPL8                                   <----------ID1   <---------CCA1(2)          <---------------AtSPL8                           ----------->GT1     ------->TEIL                    --------------->AtSPL3                    --------->AHL20(2)      --------->ANAC58               --------->AHL20(2)<-------  --------->AHL20(2)<---------AHL20(2)      --------->ANAC58         ---------->DOF2  --------->ANAC46   ggaataaaacatatttcagcatttaaaatttgtaaaaacgacgaacacgaacgcatatcaataccataccaaaaagattatatcgtacatgaaacttgtt  18045900                                                                                                *TSS                                                                                                -----                                                                                                -----                                                                                           --------->HSFB2a(1)                                                                                           <---------HSFB2a(1)                                                                                          <----------                                                   --------->YAB1                         --------->ARR14(2)        <---------ANAC58                           --------->AHL20(2)                     --------->GLK1(2)        <---------ANAC58                  --------->DAG2                        <---------GLK1(2)---- ------------>CBF            <---------AHL20(2)   <---------ATHB12              --------->ARR11(3)  - <<<<<<<<<<<<<<<<LFY         <-----------GT1  ------------>CBF                  <---------ARR14(2)  < ----RAV1(1)   --------->MYB52(1)        ---------->DOF2             <-------TEIL        <---------GLK1(2)   gcagacaatggcatgactaatgggcctctattaacttagcccataaggcccaataaaactttccaaatagtttcatttttcagattttgaagaatctccc  18046000                              <----------DOF2                            <---------HSFB2a(1)                            --------->HSFB2a(1)                            --------->HSFC1(2)                            <---------HSFC1(2)                <---------ARR14(3)                       --------->LBD16                        --------->ARR14(3)      ------>ZmHOX2a(1)--------->HSFB2a(2)                    --------->ARR11(3) ---->LBD16            <---------HSFB2a(2)                    <---------ARR11(3) ------>HVH21         <---------LBD16                     --------->ANAC46 -ARR10               --------->HSFB2a(2)               --------->ANAC46            --------->YAB1  < -->NtERF2           <---------LBD16                   <---------ZAT14  --------->GLK1(2)          -- ----->NtERF2    ------>ZmHOX2a(1)                     <---------REM1(2)<---------ARR14(2)   ------>NtERF2 ---------ATERF1(1) ------>ZmHOX2a(1)                  --------->ZAT14  --------->ARR14(2)  <--------   gacgactcctctctgtctcctcctccgggaagctttctgtctctctctctctctctctacacaagaccttgaagaatccgattccataacaatggcgact  18046100                                                                                                 ----                                                                                            ------>NtERF2                                                                                           <---------O2                                                                                           --------->O2                                                                                           ----------                                                                                           --------->DEAR3(1)                                                                       --------->LBD16    --------->ATERF1(1)                                                                      <------NtERF2       <------NtERF2                                                                     <------NtERF2       ------>NtERF2                                                                     --------->At4g35610 <---------ATERF1(1)                                                                     --------->LBD16   --------->ATERF1(1)         ------->TEIL                                      <---------MYB52(1)          <------NtERF2         --------->GLK1(2)                       <---------YAB1      <---------At4g35610<---------ANAC46        <---------GLK1(2)                     <---------ARR14(2)     ------>NtERF2    <---------ATERF1(1)      --------->ANAC58                        --------->GLK1(2)      <---------LBD16 --------->ALFIN1      --------->ANAC58                        --------->ARR14(2)    --------->DEAR3(1)------>NtERF2 ---------MYB52(1)                            ------->TEIL<----------DOF2            <---------DEAR3(1) ------->TOE2(3)       --------->YAB1        <---------ARR14(1)    <---------LBD16 <---------MYB46(3) -RAP2.6(2)     ---------->DOF2    <---------MYB46(3) <---------DEAR3(1)  XXXXXXXXXXXXXXXXXXXX>MIR834   tcgttagcacgaatctctaaaagaagcataacatcggctgtttcatcgaatctgattcggcgttacttcgccgcggaagcagtagcggtggcgacgacgg  18046200                                --------->ATERF1(1)                                <------NtERF2                                <---------LBD16                                ----------------->AGL1                                <-----------------AGL1                               ------>NtERF2                               <---------ATERF1(1)                              <---------DEAR3(1)                             --------->ATERF1(1)                             <------NtERF2                            <---------ATERF1(1)                            <-----------HVH21                            ------>NtERF2                           --------->DEAR3(1)                           <---------DEAR3(1)                          --------->ATERF1(1)                          --------->RAP2.3(1)                          <------NtERF2                         <---------RAP2.3(1)                         ------>NtERF2                        <---------bZIP60(1)                        --------->bZIP60(1)                        <---------bZIP60(2)                       --------->ATERF1(1)                      <---------ATERF1(1)                     --------->ALFIN1                     ----------->HVH21                     ----------->TGA1                   <---------At4g35610                   --------->At4g35610  ----------->GT1                                       -------                   <---------ZAT2 --------->LBD16                                  ----------->HVH21                   --------->ZAT2<---------TOE1(2)                               <---------HSFB2a(2)                  <---------TOE2(2)   ------>ZmHOX2a(2)                          --------->HSFB2a(2)                  <---------TOE1(2) <---------ARR14(2)                          <---------LBD16   --------->AtMYB61<-----------HVH21<------ZmHOX2a(2)                         ----------->RAV1(2) ----->ARR14(2)  <-----------RAV1(2)--------->ARR14(2)--------->ZAT14          ------>ZmHOX2a(1) ->HVH21    --------->ARR14(2)--------->DEAR3(1)      <---------ZAT14----------->GT1      <---------MYB46(3)   aaacacctaaaccgaaatcgcaggtgacgccgtcgccggatcgggtaaaatgggactacagaggccagagacagataattcctctgggacagtggctacc  18046300                             <---------TOE2(3)                            --------->MYB52(1)                            ------>MYB46(1)                            ------>MYB83                           ----------->HVH21                           --------->MYB55(1)                          <---------MYB111(1)                          <---------MYB55(2)                          <---------MYB52(2)                          --------->MYB46(3)                          <---------MYB46(2)            ----------->RAV1(2)                          <---------MYB111(2)       <---------At5g28300                          <---------MYB59        <-----------HVH21                         --------->ANAC58       --------->bZIP60(2)                         --------->ANAC58       --------->O2                         <---------At4g35610    <---------At4g35610                  --------->ANAC55(2)           --------->At4g35610                  <---------ANAC58             --------->MYB59                  <---------TGA1a             <-----------RAV1(2)                  <---------bZIP60(2)      <------MYB46(1)      <---------DEAR3(2)                  <---------ANAC58         <------MYB83<-----------HVH21                  --------->TGA1a         <---------MYB46(3)   <---------DEAR3(1)                   -                  <---------O2           <---------ANAC58      <---------RAP2.6(2)                  <                  <---------ANAC46 ----------------------->TaNAC69(2)                    <---------MYB52(1)                  <---------ANAC55(2)    <---------ANAC58   ----------->HVH21           <---------RAP2.6(3)                  <---------ANAC55(1)  --------->MYB55(2) --------->HSFB2a(2)          <---------ANAC46                  --------->O2     <-----------RAV1(1)--------->DEAR3(1)               <---------ANAC58    --------->At4g35610  --------->At4g35610<-----------HVH21 --------->RAP2.6(3)      <---------ANAC58    <---------At4g35610 ------>NtERF2  <---------MYB46(3) <---------HSFB2a(2)         <------NtERF2--  <--------P  <---------ANAC58     <---------ANAC46<---------WRKY38(1)               --------->ABI4(2)  ==========================MYC_MYB=======================RAV --------->SPL7         ------>NtERF2=== -->MYB52(1)  <---------ANAC58  <---------MYB52(1)----------->HVH21       <---------AtLEC2        <--   gaaggtagctgtagatgcttacgtggcacctaacgttgtgttggctggtcaggtcaccgtctgggacggctcgtctgtatggaacggtgccgttttgaga  18046400             ====================================HOX2a_HOX2a             <------ZmHOX2a(2)            --------->ARR11(3)            <---------ARR11(3)                                                       <---------ANAC58   ------>ZmHOX2a(2)                                                       <------NtERF2  <------ZmHOX2a(2)                                                       <---------ATERF1(1) <---------ARR14(3)                                                       ------>NtERF2 --------->ARR14(3)                                                      --------->DEAR3(1) <---------ARR11(3)                                                     --------->ATERF1(1) <---------ARR14(2)         --------->At4g35610                         <------NtERF2<---------ANAC58 --------->ARR14(2)         <---------At4g35610    <-------GAMYB       <---------ATERF1(1) --------->ARR11(3)    <---------GLK1(2)          --------->ALFIN1    <---------MYB46(3) -------->GLK1(1)      <---------ARR14(2)       <---------ANAC46      <---------DEAR3(1)    <-------- ---------GLK1(1)  <---------MYB52(1)      --------->MYB52(1)     --------->ALFIN1  <-------TEIL----- --------->ARR10  <-------GAMYB           <------ZmHOX2a(1)     <---------ANAC46   <---------ARR14(2) ===================HOX2a_HOX2a         --------->LBD16         <---------ANAC58   --------->ARR14(2) ----ZmHOX2a(1)<---------At5g28300     <---------LBD16          <---------ANAC58  <---------GLK1(2)   ggagatcttaataagatcaccgttggattctgctcaaatgtccaggaacggtgtgttgttcatgctgcgtggtcgtcgcctacaggttcttgttctttgt  18046500  Previous    Next  AGI:  At3g48675.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G52975.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81453.1) Range:  from: 18045177    to: 18045536    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g48680.1    Description:  GAMMA CAL2 (GAMMA CARBONIC ANHYDRASE-LIKE 2); acyltransferase/ transferase. Identical to Uncharacterized mitochondrial protein At3g48680 [Arabidopsis Thaliana] (GB:Q9SMN1); similar to GAMMA CAL1 (GAMMA CARBONIC ANHYDRASE LIKE 1), carbonate dehydratase [Arabidopsis thaliana] (TAIR:AT5G63510.1); similar to unknown [Populus trichocarpa] (GB:ABK95854.1); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004) Range:  from: 18045996    to: 18048026    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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