Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                               ------                                                                                               <-----                                                                                         <----------DOF2                                                                                         <---------DAG2                                                                                        <------NtERF2                                                                                       ------>NtERF2                                                                                      --------->DEAR3(1)                                                                                      --------->RRTF1(2)                                                                                      --------->RRTF1(3)                                                                                      --------->DREB2C(2)                                                                                      --------->RAP2.3(3)                                                                                      --------->RAP2.6(2)                                                                                      --------->RAP2.3(2)                                                                                     --------->ATERF1(1)                                                                                     --------->ORA47(2)                                                                                     --------->RAP2.3(1)                                                                                     --------->ERF1                                                                                     --------->DEAR4(2)                                                                                     --------->RRTF1(1)                                      <----------DOF2                               <---------ATERF1(1)                                   ------>NtERF2                                    --------->ABI4(1)                                  --------->RAP2.3(3)                               ------>NtERF2                                  --------->RAP2.3(2)              <---------At4g35610<---------ALFIN1                                 --------->RAP2.3(1)            ------>NtERF2      <---------ALFIN1                                ------>NtERF2                ----------->RAV1(2)   ------->GAMYB ----                                <---------ATERF1(1)        ------->TEIL            --------->AtMYB61                               --------->DEAR3(1)          --------->ARR14(2)      --------->DEAR3(1)                               --------->ANAC46            <---------ARR14(2)      --------->DREB2C(2)                              --------->SPL7             ------->GAMYB             --------->ANAC46                      <---------At4g35610          --------->TOE2(3)              --------->MYB46(3)                 --------->ALFIN1--------->ORA47(2)--------->TOE1(3)              --------->DEAR3(2) <---------MYB52(1)   --------->At4g35610          --------->AtMYB61             <---------ATERF1(1) -------->LBD16 <---------MYB52(1)--------->DEAR3(1)  --------->MYB52(1) <---------At4g35610   <----- -------LBD16 <---------DEAR3(1)--------->LBD16    --------->YAB1  ------>NtERF2<---------ALFIN1<----   tccggtgtctgataagccggtgtgagcatccctccgccgtctttgaaactcaaccataacggaccctgccgcttctgcttctccaccgccgccttaagat  17979100                                                                                    ------->TEIL                                                                              --------->LBD16                                                        ----------->GT1       ------>NtERF2                                                   ----------->HVH21          <---------MYB46(3)                                               ----------->HVH21            <---------LBD16                                              --------->LBD16      --------->TGA1a <---------ALFIN1                                             <---------ANAC58      --------->O2   <---------ZAT18            <---------MYB52(1)               <---------ANAC46      <---------O2   <---------ZAT14 --->AGP1  --------->LBD16                   <---------ANAC58   ----------->HVH21 <-------TEIL ------ --->ARR11(3)                <---------At5g28300 <---------DOF5.7(2)       ------>NtERF2     <------- ----AGP1<---------LBD16    <---------WRKY38(1)--------->DOF5.7(2) <---------TGA1a--------->ZAT18 -->ZmHOX2a(2)              <-----------GT1<---------ZAT14      --------->ANAC46 --------->ALFIN1 --- ----ARR11(3)             <-----------HVH21--------->ZAT14 ---------->TaMYB80<---------ANAC46<------- --ZmHOX2a(2)        ---------->DOF2   --------->ZAT6 <---------ANAC46     --------->LBD16  ---------   ctataggtttctccggtaatagagaaagagtcaccgcattagcactgccgtgaacgacgggtttatccgacgtcttccgccgggtgcacctcttggcgtt  17979200                                                                               <---------MYB52(1)                                                                              ------>NtERF2                                                                             --------->RRTF1(3)                                                                             --------->RAP2.3(2)                                                                            <------NtERF2                                                                            --------->ATERF1(1)                                                                           <---------RAP2.3(1)                                                                           --------->ABI4(1)                                                                           ------>NtERF2                                                                           <---------ATERF1(1)                                                                          --------->DEAR3(1)                                                                          <---------DEAR3(1)                                                                          <---------ATERF1(2)                                                                          --------->RAP2.3(3)                                                                          --------->ANAC46                                                                          --------->ATERF1(2)                                                                          --------->RAP2.6(2)                                                                          --------->RRTF1(2)                                                                          <---------ALFIN1                                                                          --------->RRTF1(3)                                                                          --------->RAP2.3(2)                                                                         --------->RAP2.3(1)                                                                         --------->ERF1                                                                         --------->ORA47(2)                                                                         --------->RRTF1(1)                                                                         --------->DEAR4(2)                                                                         --------->RAP2.6(1)                                                                         --------->ATERF1(1)                                                                        <---------RAP2.3(1)                                                                        ------>NtERF2                                                                        --------->At4g35610                                                                        <---------At4g35610                                                                  <---------HSFC1(2)                                                                  <---------HSFB2a(1)                                                                  --------->At4g35610                                                                  --------->ZAT2                                                                  <---------At4g35610        --------                                                                  --------->HSFC1(2)        <--------                                                            --------->TOE1(2)--------->RRTF1(2)    --                                                            <-----------HVH21--------->DEAR3(1)------              <---------At4g35610                          <---------O2 --------->LBD16     ---------              --------->ZAT2                               --------->O2 <---------ATERF1(1) ---------              <---------ZAT2                              <---------HSFC1(2)--------->RRTF1(1)<------              ----------->RAV1(2)                         --------->HSFC1(2)--------->RAP2.3(1)<----- --->DOF5.7(2)--------->At4g35610          <---------At4g35610  <------NtERF2--------->RAP2.6(2)----- --ANAC58   <-----------RAV1(2)<----------DOF2     ---------->DOF2<---------ZAT2       --------->At4g35610 ------>MYB46(3) --------->At4g35610       --------->At4g35610<---------DEAR3(1)       --------->LBD16 --ANAC58 ------>ZmHOX2a(1)  ------>ZmHOX2a(1)   ------>ZmHOX2a(2)--------->HSFB2a(1)<---------LBD16 ->ID1    <-----------HVH21  ===========================HOX2a_HOX2a    --------->ANAC46<---------At4g35610   accaccattctccttcagctgatgacatttcctctttcttctactagctgatctaaaggaaacgtcggagcttccgccgccgctatctccgctggatacg  17979300                ----------->HVH21               --------->ATERF1(1)               <---------ANAC58               <---------ANAC58         --------->ATERF1(1)                                                ------>ZmHOX2a(2)        ------>NtERF2                                                      <---------------AtSPL3       --------->DEAR3(1)                                                  --------------->AtSPL3       --------->ANAC46                                                    <------ZmHOX2a(2)      <---------LBD16                                                      <---------------AtSPL8  <-----------GT1    <---------DEAR3(2)                                   --------->ARR11(3)        - ->CCA1(2)  <------NtERF2                                               <---------HSFB2a(1)         - -ARR14(2) --------->LBD16                                            ---------->DOF2<---------HSFB2a(2) ------->ARR14(2)  ----------------->AGL1                        <----------DOF2     --------->HSFB2a(2) --->ANAC55(2)--------->ZAT2                                 ------>ZmHOX2a(2) --------->SPL1(2)  <-- >ARR14(2)--------->DEAR3(1)                                <------ZmHOX2a(2)  <---------TOE1(2) <--- >ARR11(1)<---------DEAR3(1)           --------->ANAC58    <---------ARR14(2)  --------->SPL7    <--- ---LBD16<---------LBD16               --------->ANAC58    --------->ARR14(2)<---------SPL7      <--- ----ANAC55(2)<---------ZAT2        <----------ID1       ----------->ARR10<---------ARR11(3)    ----- ---->LBD16------>NtERF2    <------ZmHOX2a(1)     --------->YAB1 --------------------->WRI1     <----   ggatttactccgccggggctggccggtttaggagcaatgggacgaaatcgaagcatgatgcgatctgctttggaaagatcgtacggtccagagccaatgg  17979400         --------->AtLEC2    ------>MYB83    ------>MYB46(1)  <---------MYB59 -------->SPL7            --------->DEAR3(2)                                                <-------- ------>TEIL             ------>MYB83                                                       <------MYB83 -------SPL7             ------>MYB46(1)                                                    --------- ------ANAC46            -------->P                                                         <------MYB46(1) ------ANAC58  ------->GAMYB--------->ORA47(1)                                             <---------TOE2(3) ------ANAC58 <---------ALFIN1                                           ---------->DOF2   --------->MYB59 ---------->AtSPL3      <---------ALFIN1---------->ID1              <---------ANAC46       --------->MYB46(2) -----------AtSPL8<---------ALFIN1   <-----------GT1         <---------ARR11(3) --------->ATHB12-----   cgtacctagctatgcaacaccctcccctaccgtccattttttctcgctatctatatcactcttgatatttttgtgtaaagaatgtttgagaattaggtaa  17979500                                                                      <-----------RAV1(1)                                                                      --------->ALFIN1                                                                     <-------MYC3                                                                     ------->MYC2                                                                     ------->MYC4                                                                     <-------MYC4                                                                     <-------MYC2                                                                     ------->MYC3                                                                    <---------O2                                                                    <--------ABF1                           <-----------------AG                     --------->TGA1a          <---------ZAT2 --------->ZAT14                            --------->O2          --------->ZAT2 <---------ZAT14                            <---------ANAC55(2)          <---------At4g35610                                       --------->ANAC55(2)     <---------ANAC58  --------->ANAC46                             =================================     <---------ANAC58  *TSS<-----------------AGL1                   <---------TGA1a <----------DOF2    <---------ZAT14                          ------>ZmHOX2a(2)                <------ -ANAC55(2)     <------ZmHOX2a(1)                           --------->At4g35610               <------ -->GT1   --------->At4g35610                    <-----------GT1   ------------>OsbHLH66   ---------- ----->DOF2   <---------TOE2(3)             <-----------TBP--------->ARR11(3)    <---------ZAT14   aagctttacttgagctgaggaatacactgaacagaaatggtaagggttttataacgtctgtgatctggacacgtgttggagtctatactagttgtgacat  17979600            <---------ANAC58            <---------ANAC58   <-------MYC3   -------->ABF1   <-------MYC2   ------->MYC2   <-------MYC4   ------->MYC3   --------->ANAC58   ------->MYC4   --------->ANAC58  --------->ANAC55(2)     <-------GAMYB<---------HSFB2a(2)  <---------ANAC55(2)    <---------MYB46(3)  =================bZIP_DOF            --------->HSFB2a(2)  ================================MYC_MYB  --------->TGA1a --------->ANAC46     <---------HSFC1(1)  <---------TGA1a<---------ZAT18   <---------ANAC46                    <-------MYC3  <---------O2  <---------ALFIN1   <------MYB46(1)                     ------->MYC3  --------->O2 <---------REM1(2)   <------MYB83                        <-------MYC2  <--------ABF1--------->ZAT14    --------->MYB59               <---------ANAC58 ==================bZIP_DOF       <---------MYB46(3)            <-------GAMYB----------->GT1 ---bZIP60(2)  <---------ZAT14<-----------RAV1(1)               <---------ANAC58         <----------DOF2 ---ANAC46  <---------ANAC46  <---------ANAC46             --------->ALFIN1---------->DOF2     ------ ->HVH21<----------DOF2 <---------AtMYB61            ---------->DOF2   ------->MYC2      <---------DAG2   ggacacgtgtctttgcctgcacgcttgtggttgtgttgggtctagaagacagtagtaaagggtttgggttgcacatggaaagttattctctctttttgtt  17979700                                                                           <---------ZAT6                                                                    --------->AHL20(1)                                           --------->ZAT14          <---------AHL20(1)         <-----                                          <---------MYB52(1)   <----------DOF2                 <-----                                      <---------At5g28300      --------------->AGL15          <------                                <---------AHL20(2)        --------->At5g28300            --------->DAG2                               --------->AHL20(2) ---------->DOF2--------->AHL20(2)     ---------->DOF2                           --------->MYB46(3)----------->GT1   <---------DAG2   <------ZmHOX2a(1) ---->ID1            --------->ZAT6  <-----------GT1     ----------->GT1   <---------REM1(1)  -------   tttttgcctaagttattctcccaactctaaccattaattttaccgttcagtaaaaagaactgtaactttatatattagtgtaggagaaaaaaaagtttgg  17979800      ----------->HVH21  <-----------RAV1(1)      <---------YAB1 --------->ARR11(3) -MYB83  <-----------RAV1(2)                                  <---------ANAC55(2) -MYB46(1)     <---------ZAT6                                 --------->ANAC55(2) ---AtMYB61 <------ZmHOX2a(1)                             --------->ARR11(3) -->MYB59============================RAV      --------->ARR11(3) ------->TEIL   tctatgctatgacaggagtgatagttcttgttgcaagaagaaaacatagttcttgttgaagattatgtattttgggtcgagttttttttttggttaactt  17979900                                             --------->ANAC46                                        --------->AtMYB61                                        ----                              <---------YAB1------->GAMYB                               --------->MYB59                           <---------YAB1 -------->P     <---------ANAC58       --------->AHL20(2)                        <---------YAB1 <---------MYB52(2)<---------ANAC58 --------->TOE2(3)     -----                    <----------DOF2  --------->ZAT6 --------->ATHB12     --------->bZIP60(2)  -------               <---------AHL20(2) <-----------GT1   <---------ICU4    <---------WRKY38(1)----------->GT1   cacataaatctatgcatataatctttttgattatttttaccactaaccctcaactcattgcttcgttttggggcaacgtcaaaaaaatgttaggcaaaaa  17980000  Previous    Next  AGI:  At3g48510.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G63350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68256.1) Range:  from: 17978339    to: 17979523    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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