Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <------MYB46(1)                    <---------ICU4                <---------ANAC58                  --------->ICU4                         <----------DOF2                <------MYB83                    --------->YAB1                        <---------MYB52(1)                <---------ANAC58            ------>ZmHOX2a(1)                 <---------ARR11(3)               <---------MYB46(3)       <---------ARR14(2)                    --------->ARR11(3)  ----------->GT1                       --------->ARR14(2)                   --------->YAB1 ----ANAC58    --------->MYB55(2)       --------->GLK1(2)     --------->WOX13(1) --------->KAN4(2) ----ANAC46   --------->ALFIN1         <---------GLK1(2)   --------->YAB1   --------->ICU4 ----ANAC58--------->DAG2           --------->YAB1<---------YAB1 --------->YAB1<---------YAB1   tgtatagttacaaagagtgggtgagttttagtctgaaatcagaatcctattcataattccataacaatcagaattgaaatgatcattcgttctttcatct  17942400                          <---------ARR11(3)                   <---------At4g35610     <-------TEIL                  <---------MYB46(3)     --------->ARR14(2)                <---------At4g35610      <---------ARR14(2)              --------->ANAC46          <---------At4g35610              --------->ANAC58      --------->ANAC58              --------->ANAC58      --------->ANAC58             <---------LBD16   <---------HSFC1(1)           <-------TEIL   --------->ARR11(3)          --------->CCA1(2)    --------->HSFB2a(2)                      --------->LBD16           <--         --------->ARR14(2)    --------->HSFC1(1)       <---------ZAT14<---------HSFB2a(2)       <---         <---------ARR14(2)    <---------HSFB2a(2)      --------->ZAT14--------->HSFB2a(2)       <---    ----------->GT1--------->At4g35610  --------->At4g35610     <---------GLK1(1) --------->CCA1(2)   ttggaattgtagatacacggctgatgaagatttcgagaacgcagatgcggttttcgactgcattggagaccctccagaagagagatttgatttggcattc  17942500                           ----------->GT1                           --------->MYB52(2)                           <---------MYB46(3)                         <---------MYB52(1)                        <-------GAMYB                       --------->MYB52(2)               <---------ARR14(2)            --------->ANAC46            <---------HSFB2a(2)             --------------->AGL15            --------->HSFB2a(2)             <---------------AGL15           <---------LBD16 --------->MYB46(2) -------LBD16  --------->ARR14(2)          ----------------->AGL3               <---------ANAC46 --------RAV1(1)     <---------MYB52(1)  --------->ANAC46                     <---------ANAC46 ------ANAC46--------->LBD16        <----------ID1 <---------TOE2(3)   <---------YAB1               <   tgtggaagtcttctccggaaacagttcgttagttaaaaactacaaaccacattaagaaaattgtttctatatcaacattgttgtgtatagtcatttgaac  17942600                            <---------AHL20(2)                    <---------AHL20(2)                            <---------YAB1                        --------->AHL20(2)                           <---------AHL20(1)                     <---------AHL20(1)            <-----------GT1--------->AHL20(2)                     <---------ARR11(3)       ----------->GT1     <---------AHL20(2)         --------->DAG2               <-------GAMYB       --------->AtLEC2    --------->AHL20(1)  <---------YAB1     --------->AHL20(1)      <---------ANAC46    <-------TEIL       <---------AHL20(2)   --------->ICU4        --------->ARR11(3) <---------MYB46(3) --------->KAN4(1)    --------->AHL20(2)<-----------GT1  ----------->GT1  <---------ANAC58<------MYB46(1) ---------KAN4(2)  --------->AHL20(2)--------->YAB1  ---------->DOF2      <---------ANAC58<------MYB83   agaacattcatgtaaaaccatatatataatataattcgattataacattatgaagaaaagcgttacaatatattgggcttgtgagcgttgttgggtttac  17942700                      <-----------RAV1(1)                                                          --                <---------WRKY18(1)                          ------->GAMYB                  ---------               ----------->HVH21                           --------->MYB52(1)              ------->GAMYB              <---------WOX13(1)                          ------->GAMYB                   <---------MYB55(2)             <---------ANAC58                            --------->MYB46(3)               --------->MYB46(3)             <---------AtLEC2                            <---------MYB55(2)--------->HSFC1(2)   <----             <---------ANAC58                            <---------MYB52(2)<---------HSFC1(2) -------           <---------YAB1          --------------------->WRI1--------->ANAC46             <---------MYB52(2) <---------AHL20(2) <------------CBF                  <----------ID1    ---------->DOF2<----------ID1   tatgtaaatggttttgcttgaccattgttgcaaatttctatgtgaacttcgaatatacaacaaacgccgaaacacaaagcttcgaatatacaacaaacga  17942800                    <----------DOF2                    <---------DAG2                 ------->TEIL              <---------ANAC58              <---------ANAC58             <-------TEIL         --------->DAG2        <------MYB46(1)   *TSS ---------->DOF2        <------MYB83  <---------WRKY12 <---------DAG2 <---------ARR14(2)                       --------->ANAC46  <---------WRKY38(1)        <--------P                                    --------->ANAC58         - --------->HVH21 <---------TOE1(2)--------->ARR14(2)                    --------->TOE1(2)           - >MYB52(1)   --------------->AtSPL8                                  --------->DAG2                 < -----LBD16  <---------------AtSPL3--------->At4g35610              ---------->DOF2                <- ---->HVH21  --------------->AtSPL3<---------At4g35610      <-----------GT1--------->ANAC58  --------   cgggacaacgtaaagttcgtacctttttcaagttggtatctgaattttggtgaattgagttttatctccataaagctacgaaattgctatagctatgaag  17942900                                    <---------At4g35610                                    <------NtERF2                                    --------->At4g35610                                   <---------MYB46(3)                                   ------>NtERF2                                   <---------ATERF1(1)                                  --------->ATERF1(2)                                  <---------ANAC46                                  <---------ATERF1(2)                                  <---------DEAR3(1)                                 --------->ATERF1(1)                   <---------ANAC46                                --------->LBD16                      --------->MYB52(1)                                <---------RAP2.3(1)                 ----------->TGA1                                <---------ATERF1(1)                 ----------->HVH21                                ------>NtERF2                     <---------ANAC58       --------->ANAC58        <---------DEAR3(1)              --------->DAG2       --------->ANAC58       <---------LBD16               <------NtERF2     ---------->DOF2     <---------GLK1(1)                 --------->LBD16 -------->GLK1(2)        --------->ARR14(2)               --------->LBD16 -------->ARR14(2)       <---------ARR14(2)              <---------LBD16 ---------ARR14(2)       --------->GLK1(1)          <----------DOF2<-----------HVH21 --------GLK1(2)     <------ZmHOX2a(1)             <---------DAG2 <---------ANAC58 -->DOF2            ----------->GT1<---------ERF1------>NtERF2---------->DOF2   cgattcttcaagcccatagagaaggagaattctccggcggctaagaaaccctgcctttcgccggaaaagcgtgacggagacggagatggagttgaagaag  17943000                              <---------bZIP60(2)                              <---------ANAC58                              --------->O2                              <---------O2                              <---------TGA1a                              <---------ANAC58                              <---------ANAC46                           ----------->HVH21                --------->ORA47(1)                        ----------->GT1                <---------RAP2.6(3)           <---------ANAC58               --------->RAP2.6(2)   --------->ANAC58  <---------LBD16               --------->DEAR3(1)    --------->ANAC58 ------>ZmHOX2a(1)            <---------HSFB2a(2)              --------->DEAR3(2)--------->ALFIN1   ------>ZmHOX2a(1)             --------->ZAT14  <---------ARR14(2)       ----------->TGA1   <---------ANAC58      --------->ATHB12      <-------TEIL   agaagaaccagaacgagccgtccaagtttatgacgtggaacgctaatagcttcctccttcgggtgaaaaatgactggtctcagttctctaagttcgtctc  17943100                                         <---------ANAC58             <---------ANAC58             <-----------HVH21           <---------ANAC58    ----------->GT1            --------->bZIP60(1)     <----------DOF2        --------->LBD16            <---------bZIP60(1) --------->GLK1(1)         <---------LBD16       ----------->GT1         --------->LBD16   <---------At4g35610        <---------GLK1(1)        --------->ALFIN1      -------->ZAP1      <-----------RAV1(2)    <----------DOF2       <---------ANAC58        <------   cgattttgaccccgatgtcatcgccatacaggtgatttcttttgcttcgtctttggaatccctgggttaatttcgagcaatgtgggtaaatgtgcttagg  17943200                  <-----------GT1                                                                <---             --------->TOE2(3)                                                                   ----     --------->ALFIN1                                                                   <---------ICU4 ---AtMYB61  <----------DOF2          <-------GAMYB<---------MYB46(3)   --------->AtLEC2--------->YAB1   tgtttatgtgtggaactttaaaaccctccaagtcttctagggttgtattgaagtggtttgagttcaacttgttgatgcaaattcagtcacttatgacatt  17943300  Previous    Next  AGI:  At3g48420.1    Description:  haloacid dehalogenase-like hydrolase family protein. similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT4G39970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64185.1); contains InterPro domain Haloacid dehydrogenase/epoxide hydrolase; (InterPro:IPR005833); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402) Range:  from: 17940632    to: 17942686    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g48425.1    Description:  endonuclease/exonuclease/phosphatase family protein. similar to ARP (apurinic endonuclease-redox protein) [Arabidopsis thaliana] (TAIR:AT2G41460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64180.1); contains InterPro domain Exodeoxyribonuclease III xth; (InterPro:IPR004808); contains InterPro domain Endonuclease/exonuclease/phosphatase (InterPro:IPR005135) Range:  from: 17942803    to: 17945729    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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