Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <-------GAMYB                                                                                     <---------MYB46(3)                                                                                 <---------TGA1a                                                                --------->ICU4   --------->TGA1a                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                            ===============================MYC_MYB                                                            ------->GAMYB        =============MYC_MYB                                                           <---------ANAC55(2) <---------DOF5.7(2)                                                           --------->ANAC55(2) --------->MYB52(1)                                                         --------->MYB52(1) <---------At4g35610    --                                                      --------->YAB1        --------->At4g35610  <---                <---------RAP2.6(2)    --------->MYB52(1)<-----------GT1  <xxxxxxxxxxxxxxxxsmallRNA(i) ->AHL20(2)    <---------LBD16<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->MYB52(1)<---------MYB52(1)   aaatcgaattgggattttgcggtttgtgtttaagcacaaaacaacgtcgttttggataataacggaatgaataacgtctgctaacgtctgttatcgatta  17940200                                       <xxxxxxxxxxxxxxxxsmallRNA(i)                                    <---------WRKY38(1)                                    <---------WRKY45                                    <---------WRKY12                         --------->MYB52(2)                         <-----------RAV1(1)                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                     <---------ANAC46<---------DOF5.7(2)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)             xxxxxxxxxxxxxxxx>smallRNA(s)             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)            <---------TOE2(3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            <---------TOE1(3) <---------ANAC58            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           <---------DOF5.7(2)<---------AtLEC2           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           --------->MYB52(1) <---------ANAC58           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                   <---------DOF5.7(2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   <---------WRKY45          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                    <---------WRKY12          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                <------MYB83        --------->At4g35610   <---------ANAC46                 <------MYB46(1)        <---------At4g35610  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)--------->WRKY18(1)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                  <---------AtMYB61       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                    <---------MYB46(3)       xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         ----------->GT1<---------WRKY38(1)              --      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <xxxxx      xxxxxxxxxxxxxxxx>smallRNA(i) --------->WRKY18(1)       <--------P                      xxxxxxxx    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)          --------    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          <xxxxxxx   --------->ANAC46 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  --------->ATHB12          xxxxxxxxxxxxxxxx <---------DOF5.7(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------MYB46(3)       <---------AHL20(2) ------->DOF5.7(2)<---------AtMYB61xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        --------->ICU4<xxxxxx ------YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      <xxxxxxxx   tgttaacgacagataacgttgtggtgtttgtggcatggtcaacgtttttctatgtgtaaaatggttggtcaacgattttgtcatgttttatttggccaca  17940300                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)              <---------AHL20(2)        <---------ANAC55(2)        --------->ANAC58        --------->ANAC58        --------->ANAC55(1)                                                                <---------ARR11(3)        --------->ANAC55(2)           <---------ANAC46                                     --------->ARR11(3)        --------->ANAC46              <---------ANAC58                                    <---------CCA1(2) ------->ANAC46     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                              <---------AHL20(2) xxxxxxxxxxxxxxxsmallRNA(si3)         <---------ANAC58                                --------->AHL20(2) xxxxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <---------TOE2(3)    <---------YAB1 --->RAV1(1) --------->AHL20(2)      <------NtERF2      <-----------GT1             --------->AHL20(2) xxxxxxxxxxxxxxxsmallRNA(le3)       <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)             --------->AHL20(1) xxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    ---------->DOF2   --------->YAB1 xxxxxxxxxxxxxxxxxsmallRNA(i2)---------->DOF2<-----------GT1  --------->AHL20(2) --------->AHL20(2)-- xxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            --------->YAB1       <-   tacgaagttcacgtattaaatgactatgttttaaaagttggcgtattaaacaacattttttccattaaagaaatatcgcataataatattatatatctat  17940400                                 --------->DAG2                          <---------HSFB2a(2)                          --------->HSFB2a(2)                                                 <------                          <---------HSFC1(1)                                                  -------                          --------->HSFC1(1)                      --------->DAG2          <---------GLK1(2)                      <----------DOF2                            ---------->DOF2   --------->ICU4                  <---------RAP2.6(2)                ---------->DOF2             --------->YAB1             <-----------RAV1(1)---------->DOF2   --------->CCA1(2)            <-----------HVH21 ------------->AGL15 <---------ANAC58            --------->ARR11(3)         <---------At4g35610 --------------AGL15 <---------ANAC58            <---------ARR11(3)         --------->At4g35610   <--   actatattttgaaaaatgttgtggctttctagaaaaaaggagaagaaggaagatttaaagcaaaaaaaaaagtatttaagctgtcataaatagaattttt  17940500                                                                                                  <--                                                                             --------->ANAC46<-------                                        --------->ALFIN1                     ----------->HVH21<------NtERF2    ---------->DOF2     --------->AHL20(2)                                -------->P        <--------  --------->YAB1        <---------AHL20(2)  ------------>CBF          <---------At4g35610   --------- ---AHL20(2)     ----------->GT1     <---------TOE2(3)                --------->At4g35610  <---------MYB52(1) -->AHL20(2)  ---------->DOF2        <---------TOE1(3)         <---------MYB59         <---------LBD16 -------AHL20(2)--------->DAG2   <----------DOF2             --------->MYB52(1)   --------->ANAC55(2)   ttaatcaaaagtgtctaaaaggttatttaaactcggtttaaggtgtgtcaataggtagagaaataccgaattagctaacccgacccgtactcgggtggct  17940600                                   ---------->DOF2                      <---------AHL20(2)    ------------>CBF            *TSS   --------->MYB52(1)           <---------MYB52(1)  <----------DOF2           <-------GAMYB                          <-------GAMYB --------DOF2              ----------->GT1                      ------>NtERF2 --MYB46(3)            <---------AtMYB61  --------->LBD16     ----------->HVH21       --------->ATHB12 -DEAR3(1)           <-----------RAV1(1)<---------LBD16--------->ARR11(3)--------->AHL20(2)     ----- >ALFIN1   <----------DOF2 <---------MYB46(3)          <---------ARR11(3)<---------AHL20(2) <--------   ctttctttcaattctttcttattttgtggtcgttaaacaaagaccggataagttgaagacattcgcgaccgttatttatttcgcagagtgattagagata  17940700                                                       <---------ANAC58                                                  <---------ANAC58                                              <----------DOF2                                       --------->GLK1(2)                                       --------->ARR11(3)                           >>>>>>>>>>>>>>>>>LFY   <---------ANAC58                  <----------------                    <<<<<<<<<<<<<<<<<LFY--------->RVE1(1)                        <<<<<<<<<TBF1 ----->DOF2      --------->YAB1        <---------ARR11(3)       --------->YAB1<<<<<<<<<TBF1 -ZAT6         --------->GLK1(2) --------->At5g28300   <---------ANAC58    <<<<<<<<<TBF1   aagagagagacagagagaatcaaaacaatggccactgtgaaaatctctctttccttggcttcgctatcaccatcttcttcttcttcttcaattcaatcta  17940800                                    --------->DAG2                                  ---------->DOF2                              ------->PIF5                              <-------PIF5                             <---------At4g35610                             --------->At4g35610                             <---------ZAT2                             ----------->RAV1(2)                            <---------ATERF1(1)                            ------>NtERF2                           <---------ALFIN1                          <------NtERF2                          --------->ATERF1(1)                         <---------RAP2.3(1)                        <---------RAP2.3(2)                        <---------RAP2.6(2)                        --------->ANAC46                 ----------------->AG    --------->At5g28300                 ----------------->AGL1  <------NtERF2         <---------HSFB2a(1)                 <-----------------AGL1<---------DEAR3(1)      --------->HSFB2a(1)             <-----   <-----------GT1     --------->RAP2.6(3)        <---------ANAC58                            <------   --------->YAB1----------------->AGL2<---------DREB2C(2)   ---------->DOF2                  ------- -----WRI1<----------DOF2<---------ATERF1(1)      <---------ANAC58                --------->MYB52(1)   agttatcaccatctttcattcccaatgcggcacctgcaaaggcggtgaagttgcgattcaatggaaagtccctgagagcaaaaccaatggtatacagatc  17940900                             --------->REM1(1)                 ----------->RAV1(2)                 --------->At4g35610        <---------MYB52(1) <----------DOF2                                    <---------ANAC58       <-------GAMYB     --------->At4g35610                                  <---------ANAC46 -ZmHOX2a(2)     <---------At4g35610         --------->HSFB2a(1)              <---------ANAC58      = ---ARR11(3)     <---------ZAT2             <-----------ARR10       <XXXXXXXXXXXXXXXXXXXXMIR406     < -->ARR11(3) <-----------HVH21        ----------->HVH21<---------At4g35610 <---------DEAR3(1)       =   atctcgctccgttggagtcacctgctctgcttcatcttctctgacgactcttccctctgctcttctcttcgattgcgatggcgttcttgttgataccgag  17941000                        ------->GAMYB                       --------->ANAC46                       --------->MYB46(3)              ------>ZmHOX2a(2)             <------ZmHOX2a(2)             --------->GLK1(1)             <---------GLK1(1)            --------->ARR14(3)            <---------ARR11(3)            --------->ARR11(3)            <-----------ARR10            <---------ARR14(3)            --------->ARR14(2)                                                                 <-----            <---------ARR14(2)                                                           --------->ATHB12           <------ZmHOX2a(1)                                                             <---------ICU4           <---------GLK1(2)                                                            <---------YAB1         <---------TOE1(2)   <----------DOF2                                            --------->ICU4    <-----------HVH21 <---------------------WRI1                                      --------->YAB1 ===================HOX2a_HOX2a         --------->ARR14(2)                           <---------YAB1 ------ZmHOX2a(1) ------>ZmHOX2a(1)     <---------ARR14(2)                           --------->ICU4 ====================HOX2a_HOX2a ---------->DOF2                               <---------DEAR3(1)   aaggacggtcacaggatctccttcaacgacactttcaaagaggtttctcagttttagttttttggtcattagctcttagcttcggtgatgataattggaa  17941100  Previous    Next  AGI:  At3g48420.1    Description:  haloacid dehalogenase-like hydrolase family protein. similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT4G39970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64185.1); contains InterPro domain Haloacid dehydrogenase/epoxide hydrolase; (InterPro:IPR005833); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402) Range:  from: 17940632    to: 17942686    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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