Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                           --------->ALFIN1                                                                                      --------->LBD16                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                                    <---------LBD16                                                                                   --------->ALFIN1 -                                                                                 <---------ANAC55(1)<                                                                                 --------->ANAC55(2)< <---------AtLEC2                                                                <---------ANAC55(2)- <---------ANAC58                                                                <---------ANAC58   = <---------ANAC58      ----------->GT1                      --------->DAG2       <---------ANAC58  -- ----YAB1        ----------->ARR10      <----------DOF2    ---------->DOF2       <---------ANAC46<--- ---GT1         <--------P     ----------->GT1        ----------->GT1   <------ZmHOX2a(1)<---------ANAC46   attgcatggcattgaggggtagttttggtaaatttgtaaaaacttttggataagaatggaaaaaagcagcgataggaacgattacgtgcgggagtgtaga  17931400 ------->MYC4 <-------MYC4 ------->MYC3 <-------MYC2 <-------MYC3 ------->PIF5 <-------PIF4 ------->PIF4 <-------PIF5 ------->MYC2 ------------>PIF3(1) -ZAT14 >REM1(2) >ZAT14 -------->TGA1a ---------TGA1a            <---------ICU4 ---------O2     ------->GAMYB<-----------GT1 -------->O2  ----------->RAV1(1) ========================MYC_MYB                             ----------->RAV1(1) ---------->OsbHLH66   ----------->GT1                       <---------ALFIN1 ------ZAT18  --------->MYB52(1)                    --------->ANAC46                               <-   gcacgtggaatagaatcaacagaaatagataattaccaaaacttacaaaactacacaaaacccccacatttagcctaatatttgtatagaatgcctaaat  17931500                       <---------ICU4                      --------->ICU4                         <---------AHL20(2)          --------------->AGL15                             --------->AHL20(2)          <---------------AGL15                        --------->AHL20(2)          <----------DOF2                           ------->TEIL       <---------AHL20(2)      <---------GLK1(2)--------->MYB52(1)    --------->AHL20(2)       --------->AHL20(2) --------YAB1         <---------ATHB51----------->GT1  <---------AHL20(2)   tctaattggattcttttaagagaaataatggctatgggtattgaaaaatatatgtatatatataaaattcgatttatttggattgaatgtctgtaagaaa  17931600                                 --------->WOX13(1)                                <---------WRKY12                              <-----------HVH21                             --------->TGA1a                             --------->ANAC46                             --------->ANAC58                             --------->ANAC55(1)                             <---------ANAC55(2)                             <---------O2                             --------->ANAC58                             --------->bZIP60(2)                             ==============MYC_MYB                             --------->O2                 <---------RVE1(1)                       --------->ARR14(2)     <---------ZAT6                <---------ARR11(3)                       ------>MYB46(1)    --------->ZAT14                <---------ARR14(2)   ----------->GT1     ------>MYB83   --------->DAG2                --------->ARR11(3) --------->MYB46(3)    <---------ARR14(2) <---------ZAT14     <----         ==============================bZIP_DOF        <---------MYB59 ---------->DOF2          -----         ---------->DOF2    <-----------STF1        <------ZmHOX2a(1)--------->AHL20(2)         -----  =====================================bZIP_DOF   --------->MYB59    --------->YAB1            <-----  <----------DOF2<---------CCA1(1)-------->P     <---------ICU4      <---------AHL20(2)        ------   acttctttggaaaaagaagatatttcaaaacacgtcaaccagtaaaactaattaggacctatctgaactaataaaaagtatagtgtttgatttagaatta  17931700                                                      ------>MYB83                                                  ------->TEIL                                                 <---------CCA1(2)                                               --------->ALFIN1                                              --------------->AtSPL8                                             --------->O2                                             <---------O2                                             <---------TGA1a                                             <---------ANAC58                                             ==============================================bZIP_DOF                                             <---------ANAC55(1)                      ---------------                                             <---------ANAC55(2)                      <--------------            <---------ANAC58                 ========================bZIP_DOF        ------------>CBF            <---------ANAC58                 <---------bZIP60(2)                     ----------------      <---------AHL20(2)                     <---------ANAC58                       <-----------GT1     --------->AHL20(2)     ---------->DOF2  <---------ANAC46                   <----------DOF2   ==================================================================================================   --------------->AGL15    ===========================bZIP_DOF              <-----------GT1 -----AHL20(2)           <---------AHL20(2) ----------->bZIP911(2) <---------AHL20(2)---------------- ---->AHL20(2)           --------->AHL20(2) ----------->STF1   <---------DAG2---------->ID1 ---->AHL20(1)          --------->AHL20(2) <---------TGA2(2)   <----------DOF2  <---------DAG2      *TSS ----AHL20(2)      ------------>CBF       ----------->TGA1<----------DOF2   <-----------GT1 --------- --->AHL20(2)     --------->ANAC46      --------->YAB1------>MYB46(1)   <------------------------ANAC81   aattacatttaatggcttctccacaatttaaaaagccttatatgatgacgtgtaccttccctttactttttatttgtttttcctttttccaattttgtaa  17931800                                                                                                    <                                                                                                    <                                                                                                    -    <---------ARR14(2)                                                                             --    <---------GLK1(2)                                                                           -----    --------->ARR14(2)                                          ------->TEIL                    <---- >AGL15                                                        <---------CCA1(2)                <---- -AGL15                                                 <------NtERF2                           <---- ->AGL1                                                ----------->RAV1(1)                <---------YAB1 =MADS_MADS                                            ------>NtERF2                      <---------AHL20(2) ->AG--------->GLK1(2)                          <---------GLK1(1)                      --------->ICU4 -->GT1                            <---------ANAC46   ----------->HVH21    --------->GLK1(2)  <------   atcgccgattctctctcatcgactagtatttatagtctcgtcgaacttagaaatcggcgacatttgaatcttctaagactctggtggaaatttttattac  17931900                                                   ------>ZmHOX2a(2)        <---------GLK1(1)                         --------->CCA1(2)        --------->GLK1(1)                         <------ZmHOX2a(2)     --------->LBD16                             --------->AGP1   <---------LBD16                               --------->ARR14(2) --------->TOE2(2)                               <---------ARR14(2) ---------ANAC58                                <---------GLK1(1) ---------ANAC58                           <---------ANAC46 ---------->RAV1(2)                   <---------ANAC58 ------>P                          ======================HOX2a_HOX2a ---->ANAC55(2)                    ------>ZmHOX2a(1)   --------->ANAC58                     <-------TEIL -----ANAC55(2)                    =======================HOX2a_HOX2a                     --------->ARR14(2) -----ANAC58                 <<<<<<<<<TBF1 <---------ANAC58                               <---------ARR14(2) -----ANAC58           <<<<<<<<<TBF1  <---------ANAC58 --------->ANAC58                   <---------GLK1(2) -----GT1   <---------YAB1<<<<<<<<<TBF1    <---------ANAC58    <-------TEIL  <---------TOE1(2)   ttacctgcggagttctgatagcttcttcttcttcttcctgtcttggcttgagatccgaagccaagtacagaagagttcgttcgattagtttggattcgtt  17932000                                                                <---------YAB1                                                     <---------ANAC58            <---------MYB52(1)        --------->MYB59<---------ANAC58       --------->ATHB12               <---------TOE1(3)     --------->YAB1    --------->WOX13(1)                <---------TOE2(3)  <----------DOF2   <---------AHL20(2)    <---------------AGL15       <---------ANAC46  --------->ANAC46            <-   --------->AHL20(2)   <-----------------AGL2  <-----------RAV1(1)<-----------GT1           <-------   tcgaattaatcactggtatgtataattctattactggatttaggttttatatgttgcttctttgatattatacaaaccagtgtgtttgtaacttagaggt  17932100                 <-----------GT1         <---------ZAT6       <---------ANAC55(1)                                      >>>>>>>ZML2       <---------ANAC58                                         <---------HSFC1(1)       <---------ANAC58 --------->AHL20(2)  --------->ANAC58    --------->HSFC1(1)       <---------ANAC46 <---------AHL20(2)  --------->ANAC58    --------->HSFB2a(2)       --------->ANAC55(2)    <---------TOE2(3)     ----------->GT1 --------ZAT6 <---------YAB1--------->AHL20(2)     <---------TOE2(3) --ZAT6<---------ANAC55(2)  <---------AHL20(2)    --------->YAB1<---------HSFB2a(2)   agtgttgtttcgtgttatttttctgtttaattaatgttatgaagccaagctataatgttatttgttctagaatgtagattgttgtgttctgttttgctct  17932200                                                                                               ------                                                                                     --------->ZAT18                                               ------->MYC2                        ------->TEIL------                                               ------->MYC3                     <---------YAB1 ------               --------->GLK1(1)               <-------MYC3              <---------ANAC46   ------->GAMYB              --------->ARR14(2)      --------->ARR11(3)                 <---------ANAC58  --------->MYB46(3)              <---------ARR14(2)      <---------ARR11(3)                 <---------ANAC58----------->RAV1(1)          <---------LBD16        --------->YAB1<-------MYC2            <---------MYB46(3)--------->MYB52(1)    ---------->ID1          <---------ATHB12 ------->TEIL             <---------AtMYB61 --------->ANAC46   taacttgttgttttcggatttgttttctaaatcattcataaatcttgaacgtgtttagatggcaacgagggagtggtttgtgatgaatgcacaacagacg  17932300  Previous    Next  AGI:  At3g48390.1    Description:  MA3 domain-containing protein. similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63190.2); similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G24800.2); similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63190.1); similar to H0525D09.11 [Oryza sativa (indica cultivar-group)] (GB:CAH66971.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64189.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76898.1); contains InterPro domain Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891) Range:  from: 17931800    to: 17934481    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version