Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <----------DOF2                                                                                   <---------bZIP60(2)                                              <----------ID1                       ----------->RAV1(2)                                            --------->YAB1                    --------->YAB1                                        --------->AHL20(2)                   --------->ICU4                         <---------YAB1--------->ICU4                    <---------AHL20(2)                      <---------YAB1   <---------ATHB12                  --------->AHL20(2)  <-------                    <--------HAHB4     --------->AHL20(2)             --------->TOE2(3) <---------ANAC58    --------->ATHB12<---------ICU4--------->ANAC58             --------->LBD16<---------ICU4 --------   <---------ATHB12--------->ICU4 --------->ANAC58       ----------->HVH21<---------YAB1<---------ANAC58   actgaatcattcgtctaatgcattattatgcaagttaagcaataaataagaacaaaatgctgaccctgagaacattaaaattatgacctggcttttcaga  17865700                                     --------->ICU4                     <-------GAMYB  --------->TOE2(3)                                          ------                    --------->MYB111(1)                                                        <-----                    --------->MYB46(2)                                                         <-----                    --------->MYB55(2)                                                   <<<<<<<<<GATA-1                    --------->MYB52(2)                                                  <-----------GT1                    <---------MYB46(3)     <---------TOE2(3)                      <---------AHL20(2)     <---------AHL20(2)            --------->REM1(1)                             --------->AHL20(1) --HSFB2a(2)        --------->MYB111(2) <---------YAB1    ----------->GT1        <---------AHL20(1) ->HSFB2a(2)       <--------P--------->ZAT14            <---------ANAC46<---------YAB1<---------AHL20(2)   accatgttttattgattttgggtagttgcagtatgctacattattaatgttgaaaatggtttgtaaattttgttatgctcatatatattttatctatttt  17865800         <---------AHL20(2)                                                 ---------->DOF2 <---------TOE2(3)                   --------->ATHB12                    --------->TOE2(3) --->AHL20(2)            <----------DOF2 --------->ATHB12                <----------DOF2 ----AHL20(2)            <---------DAG2<---------WOX13(1)       <---------AHL20(2)             <----- ----AHL20(1) ----------->GT1       <---------YAB1            <----------DOF2      ----------->GT1  -   atttatgttatataatgggttaaaacgctttatatagtttgattgattacagtttggaaagtctctttatttgaactttaaaggcatgtataaatttctt  17865900                                    --------->YAB1                                   <---------YAB1                                 --------->YAB1                                 <---------ICU4                                --------->ICU4                              ------>MYB46(1)                                               ---------                              ------>MYB83                                                <---------ALFIN1                            <---------MYB111(1)             <----------DOF2             --------->ANAC46                            <---------MYB59              <------ZmHOX2a(1)             ------->GAMYB                           --------->ANAC46           <---------ICU4         --------->AHL20(2)------                           --------->ANAC55(1)<---------ANAC58            <---------TOE2(3)--------->DEAR3(1) -----DOF2 <----------DOF2 --------->ANAC55(2)<---------ANAC58           ---------->DOF2<---------ALFIN1 -------->ETT(2)           <---------ANAC55(2)<---------ANAC46          <---------AHL20(2)--------->MYB46(3)   tgtctacctattactttgtttgcaaaaacacctaattatcatgctatgtcgtttgataaggactttgtgcttatttaaagtaaatgtaacccacagccca  17866000                                             <---------YAB1                                             --------->ICU4                                     <-------MYC3                                     <-------PIF4                                     ------->PIF4                                     <-------MYC2                                     <-------PIF5                                     ------->MYC4                                     ------->MYC3                                     ------->MYC2                                     ------->PIF5                                    ========================================bZIP_DOF                                    ========================================bZIP_DOF                                    --------->ANAC58                                    --------->ANAC55(2)                ----------->GT1                                    <---------O2                 ---------->DOF2                                    --------->TGA1a          --------->AtLEC2                                    --------->bZIP60(2)    <---------ANAC58                                    <---------TGA1a        <---------ANAC58                                    --------->O2         --------->ARR11(3)                                    --------->ANAC58     <---------AHL20(1)                                    <---------ANAC55(2)  <---------ARR11(3)               ===============================bZIP_DOF   --------->AHL20(1)   --------->AtLEC2                <-------TEIL       --------->AHL20(2)----------->GT1   ----------->GT1     --------->YAB1<-------MYC4     --------->YAB1 ---------->DOF2 >ANAC46   <----------ID1          ------------>OsbHLH66--------->RVE1(1)                        *TSS ----->RAV1(1) ---------->DOF2    <------------OsbHLH66 --------->CCA1(1)                   ------->TEIL   cagacatgaaaaatggacaaagtactcatagtttaggcacgtgagtgatgtttgaataatatcttgcaaaagaaagttaaaatgaaacagaacgtatttt  17866100                           <-----------GT1                         --------->HSFC1(2)                         --------->HSFB2a(1)                         <---------HSFC1(2)                         <---------HSFB2a(1)                      <------ZmHOX2a(1)                    --------->ANAC58                                                                <               --------->DAG2                                                               ---------              ---------->DOF2                                                           --------->YAB1         ---------->DOF2<---------KAN4(2)                                          <---------TOE2(3)-  --------->YAB1    --------->ANAC58           --------->ZAT14              --------->LBD16<---------GLK1(2)   gtaatcatatgaaaagaaaagtaaggaattttccattactctctctcacttctctctctctaattctcaccaagaacccagaattgagaataagaatcta  17866200                                                                                --------->ALFIN1                                                                               <-------PIF4                                                                               ------->MYC3                                                                               ------->PIF4                                                                               <-------MYC2                                                                               ------->MYC4                                                                               <-------MYC3                                                                               ------->MYC2                                                                               --------->TOE1(2)                                                                               <-------MYC4                                                               ------->MYC2    <-------PIF5                                                               ------->MYC3    ------->PIF5                                                               ------->MYC4   <---------TGA1a                                                               <-------MYC3   =======================                                                               <-------MYC2   --------->O2                                                               <-------MYC4   --------->TGA1a                                                              <---------ANAC55(2)                                                              =================MYC_MYB                                                              <---------TGA1a =======================                                                              =======================================                                                              <---------O2    <---------O2                                                              --------->TGA1a------------>OsbHLH66       <---------YAB1                                    <-------TEIL       <---------ALFIN1     <---------ICU4                                     <-----------HVH21--------->MYB46(3)    <---------YAB1                                  --------->MYB52(1)  --------->ANAC58    --------->ICU4                                --------->MYB46(3)   =================MYC_MYB  <---------ICU4                            ------->TEIL--------->DOF5.7(2) <------------OsbHLH66 <------ZmHOX2a(2)                     --------->ZAT2  --------->TOE1(3)--------->ANAC58 ---------ARR11(3)                     --------->At4g35610    --------->ANAC55(2) >GLK1(2)                      --------->ANAC55(2)<---------MYB52(2)   ------->GAMYB -------->ARR11(3)  <---------At4g35610<---------At4g35610    --------->O2<---------ALFIN1  <--------   tagatcattatgctcacctctctgctcttgtttaagtgatgagctgaatctaacaaacgttcacacgtgttaacacccacacgtgcgacttcttctttat  17866300                               <----------DOF2    ---------->DOF2       --------->HSFC1(2)                     <----------DOF2 ==bZIP_DOF               <---------HSFC1(2)                    <---------ANAC58 ==bZIP_DOF               <---------HSFB2a(1)                   <---------ANAC58 ==bZIP_DOF               --------->HSFB2a(1)       --------->ARR14(2)                           <--- --DOF2        --------->HSFB2a(2)                  <---------ARR14(2)   --------->ATHB12       <----   tctcttcaaagcctcttcttgaactagaagtttcttttgaacatgtatagtccaaatactctagttgctttagagtcattgccaaacttgaacttgtttt  17866400                                                                 <---------TOE2(3)                                 <---------HSFC1(2)              <---------TOE1(3)                                 --------->HSFC1(2)             ---------->DOF2                           --------->ZAT2                 <---------ALFIN1                         <-                           --------->At4g35610        --------->ZAT2                              <--         <----------DOF2   <---------At4g35610        <---------ZAT2                              --- ------>ZmHOX2a(1)         <---------ZAT2            --------->ANAC58                           <---- --------GT1      <---------ANAC58           <----------DOF2 <----------DOF2                    ----- -------GT1       <---------ANAC58    <----------DOF2--------->ANAC58     --------->YAB1   ----------   atccttcttctctttcattagcttgagcaagctgaagcttctttgtgctttctccaagctccactttaaagttgaatcatactcaaacatttactgacag  17866500      <-------TEIL -----ZmHOX2a(1)            --------->DAG2                         <---------MYB52(1) -------ZAT14               <---------TOE2(3)                     <---------At4g35610 ------>ZAT14           --------->YAB1                   <-----------GT1   <---------YAB1 -----At4g35610        <---------YAB1         --------->bZIP60(1) <-------GAMYB        --------->ICU4 ---->At4g35610      --------->YAB1           <---------bZIP60(1) --------->At4g35610  <---------YAB1 ->HVH21           <-----------GT1       <---------At4g35610 <----------DOF2         --------->YAB1   aggactgattcatagaatatttaacatcataaggtagttttgctactgacatcaaatttttatctttcagttgagttttgattacagtcatgtttgtgtt  17866600  Previous    Next  AGI:  At3g48230.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38766.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 17866097    to: 17869105    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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