Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->LBD16               --------->ANAC46               --------->ANAC58               --------->ANAC58              <---------LBD16    <---------ZAT14    --------->ZAT14   <---------ANAC46                                                                           -------   <---------REM1(1)                                                                      <---------AHL20(2)   --------->ALFIN1                                           <-----------GT1             --------->AHL20(2) <---------ANAC46                                         <---------AHL20(2)              <---------AHL20(1) ---------DEAR3(1)                                        --------->AHL20(1)              --------->AHL20(1) ------->At4g35610                                       <---------AHL20(2)              <---------AHL20(2) --------At4g35610                                       --------->AHL20(2)              --------->AHL20(2) ---MYB46(3)-------->P                  --------->WOX13(1)--------->AHL20(2)         --------->AHL20(2) --ZAT6 <---------ZAT6               <-----------GT1   --------->YAB1              >>>>>>>>>GATA-1 --   gagcggtgtagtcttacccgcatagtctcactgaaaaattttcaatccaaattttaaaaataatttacaaagttttaaatcgatagataaaataaattga  17856700                                 <---------AHL20(2)                             --------->AHL20(2)                         <---------YAB1                         --------->AHL20(2)                         <---------AHL20(2)                   --------->AHL20(1)                   <---------AHL20(1)              --------->AHL20(2) --------->AHL20(2)    <---------WOX13(1)<----------DOF2       --------->ANAC58  --------->ATHB12--------->RVE1(1)         --------->ANAC58  <---------ICU4  --------->CCA1(1)         --------->ANAC46                              <---------AHL20(2) --------->AHL20(2)--------->ARR11(3)--------->AHL20(2)                --------->AHL20(2) --------->AHL20(2) <---------AHL20(2)<---------ARR11(3)<---------AHL20(2)            ----------->GT1----------->GT1 -->AHL20(2)--------->AHL20(2)  <---------AHL20(2)    <---------YAB1 >>>>>>>>>GATA-1     --------->AHL20(2) ------->YAB1--------->YAB1 <---------YAB1<-----------GT1    <---------ZAT6     <---------ANAC46   atattaattgctaaataaaaatatctttttattatttatttttttaacgcaaaattttgaatagtggtatagataaaatatggagggtttatttaatttt  17856800                                                                                       ----------->GT1                                                                                 --------->AHL20(2)                                               --------------->AGL15             <---------AHL20(2)               <---------AtLEC2                <---------------AGL15           --------->CCA1(2)          <---------ICU4                      =======================================================      <---------AHL20(2)                      <-----------------AGL2          --------->ARR11(3)<----      --------->AHL20(2)                      <-----------------AGL1          <---------ARR11(3)-----     <---------AHL20(2)                       ----------------->AGL2      --------->YAB1<----------ID1     <---------AHL20(1)         ----------->HVH21          <-----------GT1---------->DOF2      ------     --------->AHL20(2)       <---------AtLEC2<-----------------AG--------->AHL20(2)---------->DOF2     --------->AHL20(1) --------->ARR11(3)    <-----------------AGL3   --------->YAB1--------->DAG2 <---------AHL20(2)--------->YAB1       <-------TEIL  ----------->GT1 <---------AHL20(2)----------->GT1   tgttaaatttaatttttgcattaatagataatgcatgacatatacatttctcaaaatggtattactacttaaataataaagatttaaaaagggaaaaaaa  17856900                          --------->At4g35610                          <---------At4g35610                        <---------WRKY38(1)                        <---------WRKY45                        <---------WRKY12                       <<<<<<<<<<WRKY43                       <<<<<<<<<<WRKY38                       --------->WRKY18(1)                       <<<<<<<<<<WRKY6                       <<<<<<<<<<WRKY11            <---------AHL20(2)           <---------ARR11(3)           --------->ARR11(3)           <---------AHL20(1)                  <---------YAB1           --------->AHL20(2)                --------->YAB1           --------->AHL20(1)         ----------->HVH21           <---------AHL20(2)   --------------->AGL15          --------->AHL20(2)   <-----------------AGL3 ===============================================MADS_MADS              <-----------TBP -----AHL20(2)         <<<<<<<<<<WRKY26   <------------CBF          ----------->GT1       ----------- ---->AHL20(2)  <---------AHL20(2)----------->TBP              <---------At4g35610<-----------GT1 --->AHL20(2) <---------AHL20(2)<---------------AGL15     <---------ARR14(2)<---------TOE2(3)  ------   aatttgacccaaatatatttttttggtcaacttactatatatgacattgatgactgagagtattcagcaactgttatataggttttacgactataaataa  17857000                                                                                           <---------YAB1                                                                   <---------TOE1(3)       --------->ICU4                                                                   <---------TOE2(3)     --------->YAB1                                                                <---------REM1(1)       --------->ICU4                                                     --------->CCA1(2)   --------->ICU4 <---------YAB1   <----------DOF2                        ---------->DOF2       <---------YAB1     <---------MYB46(3) >TBP            --------->TOE2(3)      <---------AHL20(2)    --------->YAB1      --------->ALFIN1 ---->DOF2     <---------AHL20(2)      --------->AHL20(2)    --------->ICU4    <---------AtMYB61-----   agagtctttcactctattttcttaacacataaaaaccaaaatttaaaagaagaagagatggcgatgatgaaggtaatgttgatggtggtgatgatgatgg  17857100            <---------YAB1          --------->YAB1          --------->TOE2(3)                                            <-------GAMYB                -     <------MYB46(1)                      --------->ARR14(2)          <---------ANAC58             --     <------MYB83                         <---------ARR14(2)          <---------ANAC58            <--   <--------P--------->YAB1             --------->LBD16          <------------AtMYB77            <---  <-------GAMYB                       <---------LBD16        <---------At4g35610                 <--- --------->ATHB12                   <-------MYC3             --------->At4g35610            <-------- <---------MYB46(3)                 ------->MYC3            --------->ANAC46  --------->ANAC58   <--- ---->ARR11(3)  --------->YAB1 <-----------HVH21         <-----------HVH21    --------->ANAC58   <---   tcttggttggaaccataatagtaataggtgaagagtcacatgcggattgtttgaaacggtgtcagcaactgtgcgttgataagcctttggataagaattg  17857200         <---------ANAC58  ------>NtERF2  <------NtERF2  --------->LBD16 --------->ANAC58 --------->ANAC58 --------->ANAC46 -------->SPL7 ------->ATERF1(1)             ----------->RAV1(2) -------SPL7            <---------ANAC58   ------>MYB46(1) ------ANAC58           <---------ANAC58   ------>MYB83<---------ICU4 ------ANAC58     <---------AHL20(2)       -------->P <---------YAB1 -ICU4   <---------ANAC58  --------->PCF5 ------>ZmHOX2a(1) --------------->AGL15 ------ANAC46<----------DOF2  ------>ZmHOX2a(1)  --------->YAB1           <----------DOF2 ------RAP2.6(2)  <---------YAB1 ------>ZmHOX2a(1) <-------TEIL  --------->ZAT14          <----------DOF2   cgtccgccaatgcgtcttttttaattgcggtcctcctgctcttcctaccaatgttcatcattctaagtatagtattcttttttcttctatacctttggtt  17857300                              ------->TEIL                              <---------ARR14(2)                              --------->ARR14(2)                           <---------ANAC55(2)                           <---------ANAC46                        --------->ICU4                     --------->AHL20(2)                     <---------AHL20(2)                    <---------AHL20(2)                    <---------AHL20(1)                    --------->AHL20(2)                    --------->AHL20(1)                <---------AHL20(2)               --------->AHL20(2)                                       --------->HSFB2a(2)               <---------AHL20(2)            <---------bZIP60(2)        <---------HSFB2a(2)               <---------AHL20(1) ----------->GT1    <-----------GT1--------->GLK1(1)      --------->ANAC46            --------->YAB1 <---------YAB1 ----------->HVH21<---------AHL20(2) <------ZmHOX2a(1)   tatcgtcttatcgataataaaatttaattatgtatatgctaaaactgacatggtttttcatttttttgtgatttctagcaggatgaaggctccacaaaat  17857400                    --------->ATHB51                              >>>>>>>>>>GT-1                    --------->ATHB12                        <---------AHL20(2)                   <---------YAB1                           --------->AHL20(2)        --------->ANAC58               <---------GLK1(2)                       --------->ICU4                 --------->ANAC58          <------ZmHOX2a(1)                      <----------DOF2  --------->ARR11(3) --------->SPL7   catggaattagaggatagattattattgatttttagaccaaaaacatatagcttttaaagattaaaatgatatagagtttttgttcgtaagtcataaaac  17857500                                                                                 --------->GLK1(1)                                                                                --------->ARR14(2)                                                                                <---------GLK1(2)                                                                                <---------ARR14(2)                                                                            <---------LBD16                                                                            <---------At4g35610                                                                          <---------DEAR3(1)                                                                         --------->SPL7                                                <---------AHL20(2)      --------->ARR14(2)                                           <---------AHL20(2)           <---------ARR14(2)                                         <---------RVE1(1)              <---------MYB52(1)                                        --------->ARR11(3)          --------->ZAT14                             --------->MYB52(2) --------->AHL20(2)  <---------ZAT14                       <---------ANAC58 <---------ARR11(3)     <---------At5g28300 <-----------GT1                       <---------ANAC58 <---------GLK1(2)     <-----------GT1  <------NtERF2   acttggatgtttagatgtgttcttggcatgtttgtttctacagatttttttttaatacatgaattcacagttcagttcggcggattttcagtttgagttt  17857600  Previous    Next  AGI:  At3g48208.1    Description:  Encodes a Plant thionin family protein Range:  from: 17857058    to: 17857327    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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