Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <----------DOF2       <---------ICU4                                                  --------->TOE2(3)      <---------ATHB51                                                <-----------------AGL1      <---------AHL20(2)                                          --------->AHL20(2)      --------->AHL20(2)                                          <---------ICU4      --------->ICU4                                              <---------AHL20(2)------->GAMYB   --------->AHL20(2)                                             --------->ATHB51-------->P  <---------AHL20(2)                                   <---------AHL20(2)         --------->ANAC58  -  --------->AHL20(2)                        ------->GAMYB --------->YAB1          --------->ANAC58 -- -------AHL20(2)                    <----------DOF2   <---------AHL20(2)    <---------WOX13(1)     <- ------>AHL20(2)          <----------DOF2  --------->MYB46(3)    <---------AHL20(2) --------------->AGL15 ---AHL20(2)   <---------DAG2 <----------DOF2         --------->AHL20(2)  --------->ATHB12    <------   aaaaataaataattagactttatgctctctttctttccctttacaaccacatactattaattagaaaattatttcttaattggcaacccaatatagatgt  17807900                                                                                  ----------->GT1                                                                                --------->DAG2          ---------->DOF2                                                      ---------->DOF2  <---------AHL20(2)                              <---------ZAT6       <---------AHL20(2)          -- -------->CCA1(2)                             --------->ZAT14         --------->AHL20(2)        <---- ------->ARR11(3)                             <---------ZAT14         <---------AHL20(2)      <------ --------ARR11(3)           <-------TEIL     <----------DOF2         <---------WOX13(1)   --------->AHL20(2) ---REM1(1)        --------->TOE2(3)      <-----------GT1<----------DOF2   <---------AHL20(2) -------   agatataatttccaaagaaaacctcatagattcaagtttaaaattcactttagtgctatctttctcatttgatttattttaaaaagctaaaatgaattaa  17808000           <---------At5g28300         --------->ARR14(2)                                                                        <-         <---------ARR14(2)   <---------ARR14(2)                                             <------- -------->DOF2                --------->ARR14(2)        <-------TEIL              <----------DOF2  -- -----TOE2(3)              <------ZmHOX2a(1)     --------->TOE2(3)         --------->At5g28300 ------ ---AHL20(2)       <---------AHL20(2)            >>>>>>>>>RAP2.2     ---------->DOF2      <---------MYB52(1) -->AHL20(2)     <----------DOF2          --------->GLK1(2)   ------>ZmHOX2a(1)   <---------DAG2<----   tgaaaggaacagataccgtctttaatggaggagaactggagaagaatccaatctaaaatacatcctcgtgtttaagcggtgagactttttcggtttgctg  17808100     <---------TOE2(3)                                                 --------->ANAC58    <-----------------AG                                               <----------ID1    <---------At5g28300                                            <---------DAG2   <-----------GT1                  --------->At4g35610      --------->DAG2   --------->MYB52(1)        --------->LBD16                ---------->DOF2 --------AHL20(2)          <---------LBD16             --------->ZAT14 --------->ANAC58 --At4g35610             <---------ARR14(2)            <---------ZAT14 --------->ANAC46 ------->AHL20(2)        --------->ARR14(2)            <---------At4g35610      --------->CCA1(2) ----->GT1              <---------GLK1(1)       ----------->HVH21  <----------DOF2                  - ---GAMYB        --------->YAB1     <---------At4g35610--------->At4g35610 ---------->DOF2   --------   ttaaattacggttttggtatcaaaacatttccggtttaagctgtatagctctgactctgcagaaaagtactttacgccaaagagatgaacaagagtagta  17808200                                    --------->DEAR3(1)                                   --------->ANAC58                               ------>NtERF2                              --------->O2                              --------->bZIP60(1)                              <---------bZIP60(1)                              ----------->HVH21                              --------->ANAC46                              --------->ANAC58          --------------->AtSPL3                           --------->DEAR3(1)          --------->SPL7                           --------->At1g77200         <---------ZAT14                          --------->DEAR3(2)           --------->ZAT14                      ---------                  --------->GLK1(2)--------->ANAC58  <---------SPL1(2)            <----------DOF2       <---------ANAC55(2)--------->MYB46(3)         <---------SPL7           <----------DOF2 ---------->GT1  <---------GLK1(2)------>NtERF2      <---------ZAT14  --------->ZAT6        --------- --->GT1     ---------->DOF2  --------->ANAC58     --------------->AtSPL3   ---------->ID1<---------ALFIN1   agtagtaatacgtagaaaagaatctctcaccgacgacaccgaagacgaagaagaccgtacagtacatttcttacacttgtctttctttctaaacacctca  17808300                           <---------ANAC58                      <-----------RAV1(1)                   <---------ARR14(2)                   --------->ARR11(3)                   --------->ARR14(2)                   <---------ARR11(3)                              <---------GLK1(2)                   *TSS    <---------ANAC58                <------ZmHOX2a(1)                ---------              ------------>CBF                            ----------->GT1                   <--------             --------->ANAC58                          <---------ANAC58                 ---------->DOF2 >bZIP60(2)  --------->ANAC46                          <---------ANAC58         --------->ANAC58 >ANAC46     --------->ANAC58         <------ZmHOX2a(1)<---------ANAC46         --------->ANAC58 <---   cttactctcactctcacacaatatctgttgcgcttctacaggaaaatcactcacattgcgaggaaaaaagattatttgactcaaggaaacaaaagataat  17808400        <----------DOF2          <-----------RAV1(1)   --------->HSFC1(2)   ----------->GT1                         --------->AHL20(2)         <--------ATHB1   --------->HSFB2a(1) <---------TOE2(2)               <---------ANAC58                    --------->ATHB12   <---------HSFC1(2)  <---------TOE1(2)               <---------ANAC58         <---------AHL20(2)   <---------HSFB2a(1)<-----------RAV1(2)      <-----------GT1  <---------AHL20(2)        --------->ICU4 >ARR11(3)            =======================RAV  <----------DOF2           <---------AHL20(2) -ARR11(3)         ------>ZmHOX2a(1)    <---------MYB46(3)     --------->AHL20(2)         <---------ATHB12 ------LBD16    <-----------------AGL1<---------ANAC46 <---------ANAC46    <---------AHL20(2)   tcggaaatttcttttgttttcctctcaggtaaattttgttgtttgttaatttcttttccttggaaaaaaatttgttttttattttttgatcaatgattcg  17808500                                                                                                    <                                                                                           <---------                                       --------->AHL20(2)                                 <---------ANAC58                            --------->ATHB12                                              <---------ANAC58             --------->CCA1(2)   <------MYB83                                     <----------DOF2   <            <---------ARR11(3)   <------MYB46(1)                            --------->ATHB12        <            --------->ARR11(1)  --------->MYB59                            <---------YAB1 <----------          ----------->ARR10<---------YAB1    <---------YAB1           ---------->DOF2    ---------->ID1   atttttcttgaaaagatttgattttgttgatgatttggtaatcaaatatgagtaatatggagtcttgatgcagaaagatgatttcttttttggctttttt  17808600   <-------TEIL   --------->ZAT14   <---------ZAT14                                                                 --------->GLK1(2)   --------->ZAT18                                                          <---------ANAC58  --------->ALFIN1                                                          <---------ANAC58 ---------ANAC58                                                     --------->ZAT18 -DOF2 --------->ICU4                                                --------->ZAT14 ---------ANAC46                                              --------->GLK1(2)   <---------GLK1(2) ---------ANAC58          --------->LBD16                   <------ZmHOX2a(1)<----------DOF2 -------AGL3    <-----------GT1                    <----------DOF2   <---------ZAT14 <---------LBD16<   tggggtgcagtgatgaaattacaaaacccagataagaaaaccctaagagaaggctttagtcaggaatctagtgtagtggctttagattctggagttttag  17808700                                    <---------TOE2(3)                                  <---------WRKY38(1)                                  <---------WRKY12                                 --------->WRKY18(1)                                <-----------HVH21                                                 <--                                <--------ZAP1                                            <---------LBD16                               --------->LBD16                                          <---------HSFB2a(2)                              --------->LBD16                                           --------->HSFB2a(2)                             <---------LBD16                             <------ZmHOX2a(1)        ---       <---------ANAC46  --------->KAN4(2)                        --------->DAG2       <---------LBD16     <---------MYB46(3) --------->HSFB2a(1)                      ---------->DOF2     --------->GLK1(2) --------->ATHB12       <----------TaMYB80                --------->ALFIN1     <-------TEIL       <-- ---------YAB1          <---------HSFB2a(1)  --------->ICU4----------->GT1    --------->CCA1(2)   ---   ctatgagtggtttgaaatgcgatgggaaattcccggtcaaggatgtattaatggaagaaggtggtgataaagtgaggaagattcaagtttctgggggaaa  17808800  Previous    Next  AGI:  At3g48190.1    Description:  ATM (ATAXIA-TELANGIECTASIA MUTATED). Identical to Serine/threonine-protein kinase ATM (ATM) [Arabidopsis Thaliana] (GB:Q9M3G7;GB:Q9M4D7); similar to PWWP domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G40340.1); similar to hypothetical protein OsJ_000051 [Oryza sativa (japonica cultivar-group)] (GB:EAZ10226.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64335.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ63931.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain PIK-related kinase (InterPro:IPR014009); contains InterPro domain PWWP (InterPr Range:  from: 17808319    to: 17839576    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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