Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->CCA1(2)                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)                                                                              <---------ARR11(3)                                                                              --------->ARR11(3)                                                                            ----------->ARR10                                                                        --------->DAG2                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)              -----                                                                --------->MYB52(1)        -----------                 <---------YAB1                       --------->AtMYB61---------->DOF2   >>>>>>>>>TBF1              <---------ZAT6    --------->YAB1 <-----------HVH21--------->ARR14(2)       ------------    ----------->GT1            <-------TEIL   --------->WOX13(1)<---------ARR14(2)<---------LBD16----   aacatagggatatatagtgatcatacatgtagattcataagtctaaatcagtcagaccaaaacaccgatcggaaaaaggagatattcggaagaagaaaaa  17804100                                                                                   <------MYB83                                                                                   ----------->GT1                                                                                   <------MYB46(1)                                                                                  --------->MYB59                                                                              --------->ATHB12                                                                            --------------->AGL15                                                                            <---------------AGL15                                                                           <-----------------AG --------->ANAC58                                                          ========================== --------->ANAC58                                                        <---------ALFIN1 ----->DOF2                                                ----------->GT1 <-----------------AGL1 >GT1           ---------->DOF2   ---------->DOF2      ---------->DOF2 --------->ANAC58 ------------>ANAC81   ----------->GT1             ---------->DOF2     <---------ALFIN1 -------------------->ANAC81---------->DOF2   ---------->DOF2          --------->ANAC58 --------->ICU4   aagaagcaaatagaaatacaaagggtagtcaaaagaaaaagaaacacaaaaagaaaagaaagagtaaaaacacacacacttgatttggtaattttcaaga  17804200                                                                     ------->MYC3                                                                     <-------MYC3                                                                     <-------MYC2                                                                     <-------PIF5                                                                     ------->MYC2                                                                     <-------MYC4                                                                     ------->PIF5                                                                     ------->MYC4                                                                    <---------TGA1a                                                              --------->ANAC58                                                           <---------SPL7                                                          --------->TOE1(1)                                                          --------->TOE2(1)                                                         <---------------AtSPL3                          <---------SPL7                 --------------->AtSPL3                          ----------->HVH21             ------>ZmHOX2a(2)                         ------>ZmHOX2a(2)             <---------GLK1(1)                       --------->ARR14(2)             --------->ARR11(3)                       <---------ARR14(2)             <---------AGP1--------->O2                <---------At4g35610                   <---------ARR14(2)                --------->At4g35610                   --------->ARR14(2)            <---------REM1(1)                        <---------CCA1(2)--------->ALFIN1       <----------DOF2<------ZmHOX2a(1)         ==============================bZIP_DOF --------->TOE2(2)    =========================HOX2a_HOX2a        <---------DAG2--------->ANAC58   <-------TEIL<-------    ------>ZmHOX2a(2)--------->HSFC1(2)         <----------DOF2     --------->TGA1a    --------->TOE1(2)   <------ZmHOX2a(2) --------->HSFB2a(1)       <---------DAG2--------->SPL7    <---------ARR14(2)   ==========================HOX2a_HOX2a    <-----------------AG    <---------O2--------->CCA1(2)  --------->ARR11(3) <---------HSFB2a(1)    <-----------------AGL1 ------------>OsbHLH66   --------->YAB1  <---------ARR11(3) <---------HSFC1(2)     <-----------------AGL2<---------ALFIN1    --------->YAB1 =============================================================MADS_MADS        --------->ARR14(2)   tgaagatcgctttgatgcagcgaaggatcggaccgagacgcttgattccccttttggatctcgtacgcacacgtggatgaagatacaaacatatgatgat  17804300                                                              --------->TOE2(3)        <---------YAB1                                  --------->TOE1(3)     <---------YAB1      --------->YAB1                                    --------->TOE2(3)  --------->ICU4     --------->ICU4                              ----------->GT1           <---------YAB1     <---------YAB1              --------->DAG2 <---------TOE2(3)   --------->ARR11(3)   --------->YAB1               ---------->DOF2 --------->DAG2--------->TOE1(3)--------->YAB1  --------->ICU4--------->ARR14(2)              <---------TOE1(3)   XXXXXXXXXXXXXXXXXXXX>MIR172A/B  <---------YAB1<---------ARR14(2)            --------->CCA1(2)     <---------ARR11(3) --YAB1 --------->ICU4<------ZmHOX2a(2)     --------->CCA1(2) --------->YAB1--------->YAB1   gttgatgatgatgatcaagaaccgatctaaatgaaaaagtagagagagataaggtaaaccctaatcttaaaatcttgatgatgataagaatcaactactt  17804400                                                                           <---------ZAT14                                                                           --------->ZAT14                                                                           <-------TEIL                                                                        <------MYB46(1)                                                                        <------MYB83                                                                       --------->MYB55(2)                                     <-------GAMYB                     <---------DEAR3(1)                        ------>ZmHOX2a(2)                              --------->MYB111(2)                      <---------ARR11(3)                               --------->MYB46(2)                --------->GLK1(2) <---------ANAC46                    <---------MYB55(1)               <---------GLK1(2)  <---------ANAC58                    <--------P ---------->DOF2         <---------ANAC58         <---------ANAC58     <---------ANAC58--------->MYB59         <---------ANAC58<----------DOF2               <---------ANAC58--------->MYB111(1)    <----------DOF2   --------->ARR11(3)               <---------ANAC46<---------MYB46(3)  <------ZmHOX2a(1)   catcttctttttcttgggattcttgatctttggtttgtgtgttgatgtcttcttcttgggtattgggacttggtaggtgcagagaaagaagaaggagaag  17804500                                                <------------CBF                                              <---------ARR11(3)                                              --------->ARR11(3)                                             --------->YAB1                            *TSS       <---------ICU4                           <---------ICU4   <---------YAB1                           --------->YAB1 <---------ICU4                                          <--                        <---------ICU4 --------->YAB1                                             ---                        --------->YAB1<---------YAB1                                            <----                       <---------YAB1 --------->ICU4                                            -----                      --------->ARR11(3)  --------->YAB1                                        -----                      <---------ARR11(3) <---------YAB1                                        ------                     --------->YAB1 --------->YAB1               <---------TOE1(3)             <-----             ------->TEIL <---------YAB1 --------->ICU4          <---------TOE2(3)    <---------TOE2(3) <----------ID1 <---------YAB1     <---------YAB1         ---------->DOF2       <---------ZAT14<-----   aagacgacgaagatgaacatgaatgatcatcataactatcatcatgatgatattgggaactaaagtgaaggtagagagagagagaagtgaggttgtaatg  17804600                                             <---------ICU4                                            <---------YAB1                                          --------->YAB1 -------YAB1                     <------ZmHOX2a(1) ------>ICU4                    ----------->GT1 -----ICU4                     ----------->GT1     <----------DOF2 --->HAHB4                 <------MYB46(1)<--------HAHB4 ---->YAB1                 <------MYB83   <---------ICU4                                 <---------ZAT18 --->ICU4                <--------P     <-----------GT1                               <-----------RAV1(1) ----YAB1                --------->ALFIN1<---------YAB1                       <----------DOF2       - ----ATHB12      <-----------HVH21     --------->YAB1                       ------>ZmHOX2a(1)       -   atgatgagggatgaagagaagtcagaggtaggggaggaaaattatcattactactttgaacaaaatgttttctagctcctctttttttttgtgggcttct  17804700           <---------CCA1(2)     ------>ZmHOX2a(1)                                                                             <- <---------ARR11(3)                                                                         --------- --------->ARR11(3)                                                           <----------DOF2      <- -------->RVE1(1)             <----------DOF2                           --------->GLK1(1)  ---------- -------->CCA1(1)     --------------------->WRI1    <------ZmHOX2a(1)  --------->ARR14(2) -----------   aaatatcctagccctatcttatgcccttgagcctttctctctctaaatttctgaggagagagatagagagacagaaatgcctttgtggtataggggtaaa  17804800                                                                     ================================                                                                     --------------->AGL15                                                                  <-----------GT1                                                              <---------AHL20(1)                                                              --------->AHL20(2)                                                              --------->AHL20(1)                                                              <---------AHL20(2)   <-----------GT1  --------->HSFB2a(1) ---------->DOF2      --------->AHL20(2)    <---------ARR14(2) --------DAG2      <---------TOE1(2)----------->GT1          <---------AHL20(2)    --------->ZAT14 >At5g28300   --------->ARR14(2)   --------->DAG2     <---------ARR11(3)           --------->ARR14(2) ---------DOF2<---------ARR14(2)  ---------->DOF2    <---------CCA1(2)   <-----------GT1 ->GT1     <---------ANAC58    <------ZmHOX2a(1) <---------AHL20(2)  <----------DOF2 >GT1      <---------ANAC58   <----------ID1     --------->AHL20(2)  <---------------AGL15  <--------   acttttttcaattgcctatccaatgttccaagaggaaaaagtaaaagaaaattatatatctaattttatttctttttacagacagtattctctaacattt  17804900                                 <---------AHL20(2)                                --------->AHL20(1)                                <---------AHL20(1)                              <---------AHL20(2)                             --------->AHL20(2)                            <---------YAB1<---------AHL20(2)                          <---------AHL20(2)                         <---------AHL20(2)    ------>ZmHOX2a(2)    --------->AHL20(2)       --------->AtLEC2      ---------->DOF2  <---------AGP1      <---------AHL20(2)  --------->AHL20(2)           --------->YAB1 =========MADS_MADS   --------->AHL20(2) <---------WOX13(1)     ---------->DOF2                    -- ---------AGL3    <---------AHL20(2)  <---------YAB1       ---------->DOF2                     ------   tttggatctattcaatacatatatttatttattatatattttgattaatttcatgcaaaaaaaaagaaaagaatcaaagtcatgaacaatagcacatcaa  17805000  Previous    Next  AGI:  At3g48185.1    Description:  unknown protein Range:  from: 17803996    to: 17804528    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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