Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->ANAC46                                                               --------->ANAC58                                                               --------->ANAC58                                                             --------->MYB52(1)                                                          <------ZmHOX2a(2)                                                         <---------ARR14(2)                                                         --------->ARR14(2)            --------->WOX13(1)                           <-----------ARR10           <---------ICU4                                <---------AGP1           --------->YAB1                                --------->AGP1           -------->ATHB1                                --------->ARR11(3)          <---------ATHB12                               <---------ARR11(3)        --------->WOX13(1)                    <---------AHL20(2) ------ZmHOX2a(2)                      ===========================HOX2a_HOX2a -------->CCA1(2)                      ------>ZmHOX2a(1)<---------CCA1(2) ------->AGP1                          ==========================HOX2a_HOX2a --------ARR11(3)                  <-----------GT1  ----------->RAV1(1)                          ---- ------->ARR11(3)       <---------ARR11(3)------>ZmHOX2a(1)------>ZmHOX2a(2)           <-------TEIL ------>GLK1(1)         --------->ARR11(3)========================HOX2a_HOX2a  --------->At4g35610<-- -------GLK1(1)        <---------CCA1(2)  =======================HOX2a_HOX2a   <---------At4g35610---   agatccaatccaatcattcaactacatatctatctattctcctcctatataatcccacagatctaacgcaaaaacaacttccgctcccgttcatagacaa  17800600                                                                                             --------                                                                                             <-------                                                                                           ----------                                                                                        <---------ANAC46                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                    <---------GLK1(1)                                                                                 --------->LBD16                                                                               <---------LBD16                   ------>ZmHOX2a(2)            <----------DOF2              --------->GLK1(2)                  <------ZmHOX2a(2)          --------->ARR11(3)     <---------ZAT14 --------->GLK1(1) ----->ICU4      --------->ARR14(2)          <---------ARR11(3)     --------->ZAT14--------->ARR14(2) -------ICU4     <---------ARR14(2)      ---------->DOF2 --------->HSFB2a(2) <---------ARR14(2)     < ------>YAB1   <---------YAB1     ---------->DOF2        <---------HSFB2a(2) --------->ARR14(2)   ---   taatcacagaagaaatgacgatcgtctcaaacagacaaaagttcaaagctctttcaattcgcgaactaagtatacagcaaatcgggaaatgcgtagttcc  17800700                                                                       <---------WOX13(1)                                                                    <---------YAB1                                                                  --------->CCA1(2)                                                                 --------->ARR14(2)                                                                 --------->ARR11(3)  <---------YAB1                                                 <---------ARR14(2) <---------TOE2(3)                                               --------->ARR11(1) ->ARR14(2)                                                      <---------ARR11(3) --ARR14(2)                                                --------->ZAT6----------->GT1 --------->MYB52(1) ->ARR10                                              ----------->GT1--------->ATHB12--------->DAG2 ---------DOF5.7(2)                              --------->DAG2--------->ANAC58     ---------->DOF2 ------>DOF5.7(2)                               ---------->DOF2--------->ANAC58  --------->AHL20(2)   gataacgatagattgaatcgaaactcgcgaaaatcgagtgatcaagttcaaaaagtgagtaacacaagatatgattggaaaaaataaaaagtaccgatga  17800800              <---------WOX13(1)           <------NtERF2          --------->LBD16         <---------ANAC58                                       --------->At4g35610        --------->ARR14(2)         <---------ANAC58                                      --------->DEAR3(1)        --------->At5g28300         <---------ANAC46                                   --------->DEAR3(1)         <------NtERF2        --------->ATERF1(1)                                -------->ZAP1              ------>NtERF2        <------NtERF2                                      --------->DEAR3(2)        <---------ALFIN1        <---------LBD16                                    --------->MYB46(3)       <------NtERF2       <---------MYB46(3)               --------->MYB52(1)<---------At5g28300 ------>NtERF2<---------ARR14(2)       ------>NtERF2                --------->LBD16      <---------WRKY18(1)  <---------RAP2.6(3)      --------->ALFIN1             <---------ANAC46     --------->WRKY38(1)   <-----------HVH21      <---------DEAR3(1)          <---------LBD16       ----------->HVH21    <---------ANAC58   <---------DEAR3(1)          <----------DOF2          --------->WRKY12     <---------ANAC58   tgtcttcggtggcgggattgacaacagggagagttttacggagaacgggctcagtccattgaccgccgatgaagagttgccgtctcggcaccgtaatcgc  17800900                                                                                             *TSS                                                                 <---------ANAC58        ----------->HVH21                                                                 <---------ANAC58      --------->At4g35610                                                             <----------DOF2           <---------At4g35610                                  ---------->DOF2           --------->HSFB2a(1)       <---------ARR11(3)                             <---------MYB46(3)             <---------HSFB2a(1)       --------->ARR11(3)                             ----------->GT1         <-------GAMYB <---------MYB52(1)<---------GLK1(1)                            <---------AtMYB61       ------>ZmHOX2a(2)                --------->GLK1(1)                            --------->ALFIN1        <---------MYB46(3)             --------->YAB1                            <---------DEAR3(1)      --------->ATHB12            --------->YAB1                 <---------At4g35610   ----------->GT1<---------MYB52(1)      <---------TOE2(3)   catactctctctctctctctgctactagaggtggtgaaaaggagtaaaatgggatcgttgggactttccgttttggttctaagaatgatatctgacccat  17801000                                                       <---------AHL20(2)                   <---------AHL20(2)                  --------->AHL20(2)          --------->At4g35610                         --------->AHL20(2)    <---------AHL20(2)          <---------At4g35610                      --------->ATHB12         --------->AHL20(2)    <--       <---------At4g35610        <----------DOF2<---------WOX13(1)   <-----------GT1          <-----       <---------ZAT2            <---------DAG2 <------------CBF      <---------AHL20(2) <-----------GT1       --------->At4g35610    <-----------GT1 <---------YAB1      <---------RVE1(1) <---------GLK1(1)  <---------YAB1  --------->AHL20(2)          <---------TOE2(3)   <---------CCA1(1) --------->GLK1(1)   ttttctgatagctgctcatataaaatagttttttaccttttaaaaaataagattgatttaattcatggatatttacatttatttggatttctaaccattt  17801100                                                  ----------->GT1                      ------>ZmHOX2a(1)         <---------ANAC58                               <-----                <-------TEIL                    <---------ANAC46       --------->DAG2         <------       --------->AHL20(2)                       <---------ANAC58   --------->YAB1             <------       <---------AHL20(2) --------->ANAC46   <----------DOF2   <---------AHL20(2)             ------- ---------GT1  <-----------GT1            <-----------GT1  ----------->GT1                    ------- ----ICU4  --------->AHL20(2)       <----------DOF2    --------->ICU4---------->DOF2          <------   ttacatcatttttttatatacatcctatacgaggctgtcttttttttctttcttgtaaaaattgtttaatcaaaagggacattcaacaaaattgcagatt  17801200         ----------->GT1 --------->At4g35610 <---------At4g35610                                                                                - ----RVE1(1)                                                                          <------ZmHOX2a(2) ---ARR11(3)                                                                         --------->ARR11(3) ---GLK1(2)                                                                          <---------ARR11(3) -->ARR11(3)                                                                   --------->ANAC46    <- -->ARR14(2)         ---------->DOF2--------->GLK1(2)                         --------->LBD16      <- ---ARR14(2)      --------->TOE2(3)<---------GLK1(2)                        <---------LBD16        --   tttagctaaaccggttttaaacttaaagagtcatcaagaatctagactcgattccaattcttcatcacagtttaatattccgcacaagatcaaactatcc  17801300                                                     XXXXXXXXXXXXXXXXXXXX>MIR844           --------->ANAC55(1)                                                  ----------->GT1                          --------->ANAC46                                                <---------YAB1                  --------->ANAC58                                              -------->HAHB4                    --------->ANAC58                                              --------->ATHB12                  --------->ANAC46    -   <----------DOF2                            <---------ICU4           ------>MYB46(1)     --------->ANAC58 -------->GLK1(2)                            --------->ICU4            ------>MYB83        --------->ANAC58 --------ARR14(2)         <---------YAB1     <---------YAB1            --------->MYB52(1) <---------LBD16 --------GLK1(2)       <----------DOF2    <---------AHL20(2)         --------->AtMYB61    --------->LBD16 ------->ARR14(2)<-----------GT1         --------->AHL20(2)   <-----------GT1 <-----------GT1       -   agattcttttttttgagtttttcaacttttgattcgaactatataaaatgattagtaaaattattcacaaaccaaacgattcaccccatttccacggaac  17801400                                                            <---------YAB1                                                          <---------ICU4               ------>MYB46(1)                           <---------YAB1               --------->ANAC46                          --------->ICU4               --------->ANAC58                        --------->YAB1                              <-               ------>MYB83                            <---------ICU4                <---------RVE1(1)       <------ZmHOX2a(2)                              <---------ATHB12              --------->ARR11(3)      <---------ARR11(3)                      --------->ARR11(3)                    <---------ARR11(3)      --------->ARR11(3)   <----------DOF2    <---------ARR11(3)                    <---------GLK1(2)  ---------->DOF2      --------->YAB1        --------->RVE1(1) ------->TEIL --------->YAB1    ------- -------->YAB1 --------->ANAC58   ---------->DOF2     <------ZmHOX2a(2)--------->ANAC58  <-----------GT1 -------->AHL20(2)    <---------ATHB12  <----------DOF2<--------HAHB4  --------->ANAC58 <---------YAB1   aataaaaagatcaaaccaagccaaatcatctttttcaaaagtctttaatatctccgatcattatgaatatagcaagaatcaaaacagatttttatcgttt  17801500  Previous    Next  AGI:  At3g48170.1    Description:  ALDH10A9 (Aldehyde dehydrogenase 10A9); 3-chloroallyl aldehyde dehydrogenase. Identical to Betaine aldehyde dehydrogenase 2, mitochondrial precursor (ALDH10A9) [Arabidopsis Thaliana] (GB:Q9STS1;GB:Q42237); similar to ALDH10A8 (Aldehyde dehydrogenase 10A8), 3-chloroallyl aldehyde dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G74920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64403.1); similar to betaine-aldehyde dehydrogenase [Gossypium hirsutum] (GB:AAR23816.2); similar to betaine aldehyde dehydrogenase [Brassica napus] (GB:AAQ55493.1); contains InterPro domain Aldehyde/histidinol dehydrogenase; (InterPro:IPR016161); conta Range:  from: 17797125    to: 17800993    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g48180.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40966.1) Range:  from: 17801450    to: 17801904    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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