Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->HSFB2a(1)                                                         <---------HSFC1(2)                                                         --------->HSFC1(2)                                                   <------ZmHOX2a(2)                                                  <---------ARR11(3)    <-----------GT1        --------->YAB1        <---------GLK1(1)                              <---- ---------ICU4      --------->At4g35610          --------->GLK1(1)                              ----- ------->ICU4       <---------At4g35610       --------->LBD16                                <------- --------YAB1    <---------ANAC58           <---------LBD16        ---------->DOF2           <------- ----->YAB1      <---------ANAC58    --------->ATHB12    <---------HSFB2a(1)        --------->WOX13(1)   cataattcacaaattagtgtcgagctcaaacatatcgaaagattgaaccggagatcagaagttcccatcgaaagaacacattttttcaattagtgtcgag  17793200                                                                         ---------->DOF2                                                                       --------->MYB46(3)                                                                     ----------->RAV1(1)                                                                  --------->ANAC58                         <-------MYC3                             --------->ANAC46        --------->YAB1   ------->MYC3                             --------->ANAC58            -------       <---------YAB1   <---------O2<---------At4g35610        --------->ARR14(2)             -------   --------->YAB1       --------->TGA1a                        <---------GLK1(2)              <------ -----At4g35610         <---------TGA1a                       ------>MYB83 ----------->GT1    <------ ---->At4g35610         --------->O2--------->At4g35610       ------>MYB46(1)   <---------ARR14(2)--- --ANAC58      --------->ANAC46   --------->YAB1       ----------->RAV1(1)--------->DAG2      ------- --ANAC58    --------->ZAT6      <---------ATHB12  ------->TEIL<---------ARR14(2)        --------->MYB52(1)   ctcaaacatatcataacacaaaacccacatgtcgaatcatctgaattggaatgtatccaacaccaaattcgcaacaaaagtgaattcgaatcaacgaatc  17793300                                      --------->AHL20(1)       ------>MYB46(1)                --------->AHL20(2)     <---------MYB59                  <---------AHL20(2)    ================================================================MADS_MADS    ----------------->AG             --------->AHL20(2)         <---------ZAT6 -->GLK1(2)                   <---------ARR14(2)                ----------->GT1 >TEIL ------>MYB83           --------->ARR14(2)              ----------->GT1 -----ARR10                  <------ZmHOX2a(1)           <---------TOE2(3)                          < ---ARR14(2)              <-----------RAV1(2)          ---------->DOF2                       <------- ------>At4g35610         <---------LBD16  ----------->GT1 <------ZmHOX2a(1)                 -------- -->ARR14(2)     <---------YAB1--------->CCA1(2)  <-----------------AG          <---------AHL20(2)  <   tgcttaaccaaatttgtttacaattagcccaggatacaaaaaaattagtaaaacccataaaggatagtgaaaaaatcgatttttaatcgaaccagagcag  17793400                                                                          <---------ANAC46                                                                         <------NtERF2                                                                        --------->LBD16                                                                       <---------ANAC46                                                                      --------->ATERF1(1)                                                                      ------>NtERF2                                                                      <---------At4g35610                                                                      <---------LBD16                                                                      <------NtERF2                                                                     <---------RAP2.3(1)                                                                     <---------RRTF1(1)                                                                    <---------RRTF1(2)                                                                    <---------RRTF1(3)   --------->STY1(2)                                                <---------RAP2.6(2)   <---------ZAT2                                                   <---------RAP2.3(3)   --------->ZAT2                                                   <---------RAP2.3(2)   <---------STY1(2)                                                <---------DEAR3(1)            <-- <---------ZAT18                                                   <---------LBD16             ------ --------->ZAT18                          <---------TOE2(3)     <----------DOF2                <----- ---------ANAC58           ----------->GT1<---------TOE1(3)  <---------ALFIN1         <---------MYB46(3) --ZAT14       ----------->RAV1(1)  <---------YAB1          --------->MYB46(3)      --------->At4g35610 ->ZAT14      ----------------->AGL1<---------TOE2(3)      ------->TEIL<---------DEAR3(1)      <----- ---------ANAC58          <---------AtMYB61             <---------MYB52(2)----------->GT1      ------   tagcgagctagagattgcaacaatgggagaggttgaataagattagggttttgagaaaacgaaccactttgcggcggagtataaacagcggtcgctaagc  17793500            --------->ANAC58            --------->ANAC55(1)            <---------ANAC55(2)            --------->ANAC58            --------->ANAC55(2)        --------->DEAR3(1)       --------------->AtSPL3 ---------HVH21    <---------ANAC58                       <---------ARR14(2) --->At4g35610     <---------ANAC58<----------DOF2        --------->ARR14(2) ----At4g35610 ------->TEIL   <---------ALFIN1        --------->At4g35610     --------->ANAC55(2)   < ----ZAT2 <---------ALFIN1  ----------->RAV1(1)    --------->At4g35610    <----------DOF2    -------- --->ZAT2<---------SPL7--------->RAP2.6(3)  --------->AtMYB61          <-----------GT1  ---------->DOF2   tgtcgaatagccgcacgtatttcgtttcggcaacactctttagagaccatagcagaagcagaaactgagagtttaactttaagtattcaaaaaagaatcg  17793600                                                          --------->AHL20(1)                ---------                                                          <---------AHL20(2)           <------------CBF                                                         --------->AHL20(2)       <---------ANAC46                                                         <---------ICU4         ------>ZmHOX2a(2)                                                         --------->ATHB51       <---------ANAC58                                                         <---------AHL20(2)     <---------ANAC58 --------->GLK1(2)        <---------GLK1(1)             --------->ICU4         <------ZmHOX2a(2) ---------GLK1(2)         --------->GLK1(1)        --------->YAB1             <---------ARR11(3)   -- ->GLK1(2)    <---------ANAC46*TSS                 --------->TOE2(3)          --------->ARR11(3)<----   aagaatctcttcttcgtcgtggagagagatttcagaaacatttgctccctccatcttaattattttgaaatttacagagagatcgtgtgtattgggccca  17793700                                                                                   --------->YAB1                                                  --------->ANAC46                <---------YAB1   <-----------GT1                                --------->ANAC58               --------->ARR11(3) <---------WOX13(1)                      <-------TEIL                       --------->AHL20(2) >PCF2<----------DOF2               --------->MYB52(1)           --------->ANAC46<---------ARR11(3) ------->ATHB12                   <---------MYB52(2)         <----------DOF2<---------AHL20(2)      < --------CBF                    ------->TEIL      --------->ANAC58         --------->YAB1       -----   ttgattaacttttgggtttcaaaataggcccatgaaactaacatacacacacacacaaaaactctttacacaactaattttaatatcatatcaattttgt  17793800                                -------->ATHB1                                --------->ATHB51                                --------->ATHB12                               <---------ATHB51                       <---------YAB1                   <------MYB46(1)                   <---------ANAC55(2)                   <------MYB83--------->ICU4                   --------->ANAC55(2)                  --------->MYB111(1)                                <---------AHL20(2)             <                  --------->MYB46(2)                --------->AHL20(1)                              -                  --------->MYB59                   --------->AHL20(2)                           ----        <---------AHL20(2)  --------->AHL20(2)      <---------AHL20(2)                          -----       <---------AHL20(2)  <---------ATHB12      --------->YAB1     <---------AHL20(2)        <------       --------->AHL20(2)--------->WOX13(1)----------->GT1          --------->AHL20(2)        ------- ----------DOF2  <---------MYB55(1)     --------->DAG2              <---------AHL20(1)        ------- ----->ID1      <---------MYB52(1)     ---------->DOF2   --------->YAB1                   --------->MYB46(3)   cactttgtattaatttctgttaggtatcaatgaattattgaaaaagtgtaaaaataaaataagaatgcaatttttttttttttgttttgtcaacaacttt  17793900    <---------WOX13(1)  --------->ATHB12 <---------AHL20(2) --------->AHL20(2) --------->AHL20(1)                                          --------->ARR11(3) ---------AHL20(2)                                           <-----------ARR10 -------->AHL20(2)                                           <---------ARR11(3) ----->AHL20(2)              --------->AtMYB61  --------->YAB1 --------->TOE2(3) ---->AHL20(2)<---------------AGL15            <---------YAB1--------->GLK1(2)                 <----- ----DOF2     --------------->AGL15  --------->ANAC58       --------->RVE1(1)      <----------DOF2 -->TOE2(3) --------->At4g35610      --------->ANAC58       --------->CCA1(1)     <---------DAG2   -- -->TOE1(3) <---------At4g35610    --------->CCA1(2)      --------->AHL20(2)   <-----------GT1-------   aaattaattggtttagctcaaatgagtaagaccaaaggtatgcaaaactattatagaaaaaaaaatcttagttggacaaaataaccttttgttttggtca  17794000                                                                                       --------------            --------->YAB1                                                             <-------------        <---------AHL20(2)                                                           -------->P       <---------YAB1                                                            ------->TEIL    --------->ICU4                                  <---------ANAC58        --------->YAB1 ----WRKY38(1)                  ---------->DOF2     <---------ANAC46       <---------YAB1  <---------AHL20(2) ------->YAB1         <---------YAB1 --------->CCA1(2)         ----------->GT1<---------YAB1     ---- -->WRKY18(1)    --------->ZAT6<---------WRKY45     <---------ANAC58  --------->ZAT6<-----------GT1   atagaaatttttaatggtaagactataatttagtcaaagatagaccctgattttgcttatgcaagtagttaaacactatcatgaatctaccattttaagg  17794100  Previous    Next  AGI:  At3g48150.1    Description:  APC8 (anaphase-promoting complex/cyclosome 8); binding. similar to HBT (HOBBIT), binding [Arabidopsis thaliana] (TAIR:AT2G20000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67074.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83330.1); contains InterPro domain Cdc23; (InterPro:IPR007192); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 17790638    to: 17793630    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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