Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         ------>MYB83                     --------->MYB46(3)                     <---------MYB46(2)                     <---------MYB111(1)                     --------->AtMYB61                    --------->ANAC58                    --------->ANAC46        ----------->HVH21                                                                --------->MYB46(3)        <---------ZAT6 ------>MYB46(1)                                                  -------->P  ------>ZmHOX2a(1) --------->ANAC58                                                   --------->WOX13(1) --ANAC58        --------->MYB46(3)                                             --------->HSFB2a(2) --RAP2.6(2) <---------At4g35610                 ------------------------>ANAC81<---------HSFB2a(2) --ANAC58    --------->At4g35610                ------------------------>ANAC81 --------->HSFC1(1) --   cgtcctgctagtgacagcaaacaccaaacaaaactataagtcgaagagcaaacccaaaaaaaaaaaaaaaaaaactcattttctcgaatcaaccaataga  17759100                                                                  ----------->GT1                                                                ---------->DOF2         --------->GLK1(1)            --------->ANAC58                           ----------->GT1                <------ZmHOX2a(1)            --------->ANAC58                 --------->AtMYB61--------->ANAC58  ----------->RAV1(2)            --------->ANAC46             <---------MYB55(2)   --------->ANAC58--------->ANAC58  ----- ------->YAB1                            --------->MYB46(3)   --------->ANAC46--------->ANAC58  -----   atcacaaaatccagacgaaatttcaaaactttgggcaaacccatccaccaaaacagaaggaaacacgaaagaaaaaaaaaacgcctgaggaaatcgaaac  17759200                                                                    ------>MYB83                                                               --------->AtMYB61                                                               --------->DEAR3(1)                                                --------->ANAC58    ------>MYB46(1)                                                --------->ANAC58  --------->AtMYB61                                --------->At4g35610            <---------ALFIN1                  ----                                <---------At4g35610         --------->AtMYB61                    ----                               <-------TEIL <------ZmHOX2a(1) --------->MYB46(3)                <----                --------->TOE1(3)          <----------ID1  --------->MYB46(3)               <------ZmHOX2a(1) ---->ANAC58    --------->TOE2(3)      --------->ARR11(3)--------->ARR14(2)           --------->ANAC46 ---->ANAC58  -------->P      <--------P--------->CCA1(2)<---------ARR14(2) --------->RAP2.6(2) -----   gaaatcgaatagaacttaccttagaaaacgaggtagatgaagataaggacaaacaagaagaaccaccaccttccacagtcgcaattacacgagaggaaga  17759300             --------->DEAR3(1)            --------->ATERF1(1)            <------NtERF2            --------->SPL7           <---------ATERF1(1)           ------>NtERF2          --------->DEAR3(1)         --------->DEAR3(2)      ------->MYC3      <-------MYC3      ------->MYC4      ------->MYC2                                                                               <---      <-------MYC2                                                                               ---- ----->GLK1(1)                  <---------At4g35610                                           ------>ZmHOX2a(1) ----->CCA1(2)      <----------DOF2                                                 --------->TOE2(3) -----ARR11(3)   ------>NtERF2  --------->At4g35610             --------->YAB1   ----------->RAV1(1) ---->ARR11(3)------>NtERF2  ------>NtERF2       --------->AtLEC2         ------>ZmHOX2a(1)  --------   tatcaacatgtgccgacgacgacttttgtgcctccgctcacaaaccctcccatgcatagccttctatcatcttctccttcgaacaacatcaatttcctca  17759400                                                                         --------->LBD16                                                                      -------->P                                                                      ------>MYB83                                                                      --------->MYB52(1)                                                                      ------>MYB46(1)                                                                     --------->MYB55(1)          ----               --------->TOE2(3)                                     <---------ALFIN1            <---            --------->ARR14(2)                                      <---------MYB55(2)     ------>MYB46(1) ------At4g35610          <----------DOF2                  <------ZmHOX2a(2)    *TSS       ------>MYB83 ----->At4g35610------>ZmHOX2a(1) --------->LBD16         --------->AGP1 ----------->GT1 --------->TOE2(3) ->TOE2(3)  <---------ARR14(2)<-----------GT1        <----------DOF2--------->MYB46(3)   <---------MYB59   gcgaaaatcaaacaaatcctcaaaattccttttttccccagacaatattcgatacctttagatccaaaaacccaccggtgaaaaaaaaaaacctaatttc  17759500                                                --------->At4g35610                                             <---------At4g35610                                             --------->At4g35610                                          <------ZmHOX2a(2)                                         --------->ARR14(2)                                         <---------ARR14(2)                                 ---------                              ------------>CBF  <---------At4g35610                         <--------               --------->RVE1(1)       --------->LBD16                      ----------->RAV1(1)   ---               --------->CCA1(1)      --------->HSFB2a(2)                  --------->MYB46(3)  ------ --------->ANAC58            <-----------GT1 --------->LBD16    <------ZmHOX2a(2)           --------- --------->ANAC58           <-----------GT1------>ZmHOX2a(2)   --------->ARR14(2)    ------->GAMYB<-- ----->HSFB2a(2)--------->ARR11(3)    <---------HSFB2a(2)      --------->AGP1  ------->GAMYB<-------- ------HSFB2a(2)<---------ARR11(3)   <---------LBD16           <---------ARR14(2) ----------->RAV1(1)   gcgacgaaatggctcaaatatctaggtttttttccaatttcccgatccgcagataacaaaacacagatccaaaatcaacaacagcaacagcgagtaaccg  17759600                                                       --------->ZAT18                                                <---------ANAC46                                                <---------ANAC55(2)                                                --------->ANAC55(2) >MYB52(1)                                      <---------ANAC58 ---GT1                                         <---------ANAC58 ------>ARR14(2)   <------ZmHOX2a(1)   --------->HSFC1(1)             <---------AHL20(2) ->GAMYB <-----------GT1     --------->GLK1(2) <-----------------------TaNAC69(2) >ARR14(2)       --------->LBD16       <---------HSFC1(1)             ---------->DOF2 -------ARR14(2)<---------LBD16        <---------HSFB2a(2)           --------->AHL20(2) -ARR14(2)    <------ZmHOX2a(2)        --------->HSFB2a(2)           <---------ATHB12   aatcagccttgtttcgatccaggaatacgagaatttttcttcgagaaatcgcgtaagcgaacaaaacaccaataaatcgaagaagagaatagagagagag  17759700                                                    <---------ANAC46                                                  <-----------HVH21                                                <---------DEAR3(2)                                                <---------MYB46(3)                                               --------->ETT(1)                                             --------->ARR14(2)                                             <-----------HVH21                                             <---------ARR14(2)                                            <------NtERF2                     ----------->GT1       <---------MYB46(3)                                    ----                  ---------->DOF2          --------->MYB55(2)                                   <----             --------->DAG2                <---------DEAR3(2)                                 <------            --------->DAG2                <---------ANAC46                                <---------GLK1(2)           ---------->DOF2                <---------ANAC58                              <---------YAB1        <---------ETT(2)                  <---------DEAR3(1)         <---------YAB1     --------->ICU4        ----------------->AGL1            <---------ANAC58    ----------->GT1         --------->YAB1  --------->MYB52(1)--------->DAG2<---------HSFB2a(1)   <--------P <---------ICU4    <---------ATHB12   agagaaacggtcgaaaaggggaaaggtaacttgggagagttcgggcgggtcgggtcgggttagagagaaatattactgagtgtcacaatcaagattatgc  17759800                                                              <---------GLK1(2)                                                         <------MYB46(1)                                                         <------MYB83                                                         <---------ANAC46                                                        <<<<<<<<<<MYB61                                                        <---------AtMYB61                                                        --------->MYB59                                                        <---------MYB46(3)                                                        --------->MYB111(1)      --------------->AGL15                             --------->MYB52(2)      <---------------AGL15                             --------->MYB55(2)     ----------------->AGL2                             --------->MYB111(2)     ----------------->AGL3                             --------->MYB46(2)     <-----------------AGL3                            <---------MYB55(1)     <-----------------AGL2                           <---------MYB52(1) <---------ANAC58                                    <-----------HVH21 <---------ANAC58                                  --------->MYB46(3)      ------->TEIL --->TEIL                       <-------TEIL      ------>MYB83--------->ARR14(2) -----AtLEC2       <------ZmHOX2a(1)              ------>MYB46(1)       <---------MYB52(2) ---YAB1        --------->CCA1(2)                 -------->P  <---------ARR14(2)             <-------   atgtcgttctaaatatagataggaaactcatgggtacatttcgagttattccaaccgttaggtggattctgaaaacgaaccatactttctaacattgcac  17759900                                                                                           <---------YAB1                                                                                           --------->ICU4                                                                                         <---------ICU4                                                                                         --------->YAB1                                                                                        <---------YAB1                                                                                      --------->YAB1-                                                                                     <---------AHL20(2)                                                                                    --------->AHL20(1)                <---------MYB46(3)                                                  <---------AHL20(1)           <---------YAB1                                                           --------->AHL20(2)         --------->YAB1       --------->ARR11(3)      <---------YAB1                <---------AHL20(2)         <---------ICU4       <---------ARR11(3)------->MYC3              --------->ARR14(2)    -----      --------->YAB1    ----------->GT1         <-------MYC3              <---------ARR14(2)<-------- --ZAT18--------->ICU4<---------AtLEC2   <---------AHL20(2)  <-----------GT1       --------->YAB1 <--   attactactcatcatgagttgttagcatgtaatatctatctatataaacatgtgttatgtttttaacccaaaaccagtttcgctaatataatcataattc  17760000  Previous    Next  AGI:  At3g48060.1    Description:  bromo-adjacent homology (BAH) domain-containing protein. similar to bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G48050.2); similar to bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G48050.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60153.1); similar to BAH domain-containing protein, putative [Lycopersicon esculentum] (GB:AAX95757.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO64380.1); contains InterPro domain Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal; (InterPro:IPR010990); contains InterPro domain Tra Range:  from: 17754099    to: 17759480    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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