Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <-------GAMYB                           <---------ANAC46                                                         -                      --------->ATHB51                                                              <                      --------->AHL20(2)                                                            -                      <---------AHL20(2)  <---------AHL20(2)             --------->At4g35610        <                      <---------ICU4  --------->DAG2                     <---------At4g35610       --                     <---------AHL20(2)----------->GT1          --------->TOE2(3)         <---------ANAC46 ---ZmHOX2a(1) --------->YAB1        ---------->DOF2           <---------ICU4            ---------->ID1   gagagagcctgtgtctatgaaaaattatttcgttgatagaaaagttaattactgacaaatattaaacattagtttagctgattttgtttttgtcgtctaa  17735200          ---------->DOF2        <---------YAB1                                                         <------------CBF     --------->AHL20(1)                                                       --------->ATHB12     --------->AHL20(2)                                                       <---------AHL20(2)     <---------AHL20(2)                                                      <---------AHL20(2)    <---------AHL20(2)                                                       --------->AHL20(2)    --------->AHL20(2)                        --------->ANAC58               --------->AHL20(1) <---------AHL20(2)                           --------->ANAC46          ------------>CBF -------->AHL20(1)                       <---------YAB1                 <---------ATHB12        <---- ---------AHL20(1)               ------->GAMYB--------->ANAC58    ----------->GT1 <-----------GT1 -------->AHL20(2)            --------->MYB52(1)                  ------>ZmHOX2a(2)        <--------- ---------AHL20(2)            ----------->RAV1(1)             <---------YAB1 <---------AHL20(1) <---- ------->AHL20(2)     ---------->DOF2----------->GT1  ---------->DOF2 --------->WOX13(1)  <---------TOE2(3)   aattaattttattaaagacacatacaaagaaacaacagagagtattatacgaaaacaaaagatgatgatcgtaaatcaatttattgactatttatgttgc  17735300                                                          <------MYB46(1)                                                          <------MYB83                                                          ----------->GT1              <---------ARR11(3)                                                         <---------TOE2(3)   --------->YAB1                                                         --------->MYB59    <-------TEIL----------->GT1                                             <---------AHL20(2)         <---------AHL20(2)                                            <---------AHL20(1)         <---------AHL20(2)  ----------->GT1                           --------->AHL20(2)   --------->YAB1    ------>ZmHOX2a(2) -----ANAC58                   ------>ZmHOX2a(2)    --------->AHL20(2) --------->AHL20(2)       ----- --RAV1(1) --------->TOE2(3) --------->ARR11(3)     <---------AHL20(2) <---------AHL20(1)----------->GT1 -----ANAC58        ---------->DOF2         <---------AHL20(2)--------->KAN4(2)<---------YAB1 -------   tcgatggtcaaaaacttaatgaaaaagatgtgatctaggtatacaattttttttttaattaggttattcgtaataaaattcatgatcgagatgtttaaaa  17735400                                                               <---------WOX13(1)                                                              >>>>>>>>>ARR1                                                              >>>>>>>>>ARR2                                                             --------->YAB1                                                             --------->ATHB12             <---------ATHB12                                                   <---------ANAC58                   ------------>CBF                                                   <---------ANAC58                  ------>NtERF2                 <---------ANAC46                  <---------ANAC46                  <---------At4g35610               --------->REM1(2)                ----------->HVH21              <------------CBF ------>GT1   --------->ALFIN1          <---------ANAC46    <---------YAB1   <---------AHL20(2) --->DOF2   <---------ANAC46     <---------AHL20(2)<---------bZIP60(2)      --------->AHL20(2)   gtaatttgaatattatgtgtaggggacaatacaatttttatgacttatatgtgacttggtctatgattgtttaaaatataaaattgcagccaatggtttg  17735500                           <---------ANAC58                     <-----------RAV1(1)                   --------->ANAC55(2)                   <---------ANAC46                                                                <-                   <---------ANAC55(1)                                                       --------                   <---------ANAC58                                                          --------                   <---------ANAC55(2)                                                       <-------                   <---------ANAC58    --------->AtMYB61                   *TSS             <--------   --------->At4g35610     <---------ANAC58                        <----------DOF2      --------->ANAC58   <---------At4g35610 <--------P     --------->ANAC46            <---------DAG2        --------->ANAC58   attacagctaaaaaaacagtttcgtgttggcttctattacaccaaaacccttcaaactcagtttcgacccttttgtaatggaagttggacaagcgaatcc  17735600                                                                                              <------                                                                                          <---------ANAC58                                                                                          <------MYB83                                                                                          <---------ANAC58                                                                                          <------MYB46(1)                                                                                          <---------DEAR3(2)                                                                                         --------->MYB111(1)                                                                                         <---------MYB46(3)                                                                                         --------->MYB55(2)                                                                                         <---------DEAR3(1)                                                                                         --------->MYB111(2)                                                                                      ------------>AtMYB84                                                                                      --------->MYB55(2)                                                                                      <---------MYB46(3)                                                                                     <---------AtMYB61                                         ----------->RAV1(2)                      <---------DEAR3(1)                                        ------>ZmHOX2a(1)                    --------->PCF2<---------PCF2                                <---------MYB52(1)     <---------ARR14(2)   <------ZmHOX2a(1) <------         <---------ARR14(2)    --------->At5g28300     --------->ARR14(2)<-----------RAV1(2)---------         --------->ARR14(2)   ----------->GT1      --------->At4g35610------->GAMYB  --------->ALFIN1 ---------DOF2             --------->DEAR3(1)      <------NtERF2     --------->MYB46(3) <---------MYB55(1) ->ARR14(2)                <---------ALFIN1------>ZmHOX2a(1)         <---------MYB55(2) --------->ALFIN1 ->GLK1(2)                 --------->AtMYB61       <---------At4g35610--------->AtMYB61 <---------ANAC46 --ARR14(2)               <---------MYB55(2)    --------->ATERF1(1) -------->P --------->ATERF1(1) -ARR14(1)                --------->MYB46(3)    <------NtERF2     --------->MYB46(3) <---------DEAR3(1)   gcttcttggtgaatcgtcttgctgttccaccaccgttaaatcctcctggtggcagcgaattcacagaaacaaccaccaggagccacggtggtgggtgcga  17735700                                  <---------ANAC46                          <---------GLK1(1)                          --------->GLK1(1)                        <------NtERF2                      --------->ETT(1)    <---------DEAR3(1)                      ------>NtERF2                      <---------DEAR3(1)<---------ALFIN1                         --------->ANAC58             --------->LBD16      <---------ANAC58                           <------ZmHOX2a(2)           ------>ZmHOX2a(2)      <---------ANAC58                       --------->LBD16<-----------HVH21          --------->ARR14(1)     --------->ZAT2                         ------->GAMYB------>NtERF2         --------->ARR14(2)      <---------ZAT2                        --------->MYB46(3)--------->WRKY18(1)         <---------ARR11(3)  ------>ZmHOX2a(2)                     <-------TEIL<---------ALFIN1         <---------ARR14(2) <------ZmHOX2a(2)                    <---------ARR14(2) --------->DEAR3(1)         --------->ARR11(3)<---------ARR14(2)                    --------->ARR14(2)<----------CDC5     ---------->DOF2<-----------HVH21<---------PCF5          --------->LBD16<---------ARR14(2) ---ANAC58--------->CCA1(2)--------->ARR11(3)                --------->At4g35610 --------->ANAC58 ---ANAC58<------ZmHOX2a(2)--------->ARR14(2)              <---------LBD16  --------->ARR14(2) >ALFIN1 --------->ARR11(1)<---------ARR11(3)--------->ALFIN1<---------At4g35610 --------->ANAC46   gcgtttctaaagatccgagaatggtcggagatcgtggctgggccacggtggaagactttcatccgcagattcaaccgcgatccacgccgaggtcaagact  17735800                                                                                          <-------GAMYB                                                                                         <------MYB83                                                                                         <------MYB46(1)                                                                                         <---------DEAR3(2)                                                                                        <---------DEAR3(1)                                                                                <---------ZAT2                                   <-----------GT1                              --------->At4g35610                            ------>ZmHOX2a(1)                                   <---------At4g35610                           --------->TOE1(2)                                    --------->ZAT2                         <------ZmHOX2a(2)                                ------>NtERF2 <---------DREB2C(2)                        --------->ARR11(3)                             ------>NtERF2    <---------MYB46(3)                        --------->ARR14(2)                            --------->DEAR3(1)<---------DEAR4(1)                   --------->ARR14(2)                         ---------->DOF2  --------->GLK1(2)   <-                   <---------ARR14(2)   <----------DOF2   <----------ID1 --------->DEAR3(1) ---------       <----------ID1   <---------ARR14(2)         <---------------------WRI1  ------->TEIL--------->ALFIN1   gggacgatagtgacaaattccgatacgatcctgtgagttacactttgagtttcgaagatgaagacaaagacgacgacgacgaagctggagtcggtggagt  17735900                                                                                  <---------GLK1(1)                                                                                --------->YAB1                                                                          ----------->HVH21                                                                         --------->LBD16                                                                         --------->At5g28300                                                                        ----------->GT1                                                                        <---------ANAC46                  --------->ANAC58      ----------->GT1               ------>NtERF2<---------ARR11(3)       --------->HSFB2a(2)            <-----------RAV1(2)            --------->ANAC46  --------->HSFC1(2)               <---------ANAC58               --------->WRKY12--------->GLK1(1)  --------->HSFB2a(1)           <---------MYB52(1)                ----------->HVH21--------->ARR11(3)  <---------HSFC1(2)           <-------GAMYB                      --------->WRKY38(1)  <---------HSFB2a(1)         --------->ANAC46      --------->LBD16<---------DOF5.7(2) --------At4g35610--------->ANAC58 <---------ANAC58 <---------At4g35610<------NtERF2 >ZAT14<---------HSFB2a(2)   <------NtERF2 >>>>>>>>>GT-1         --------->DOF5.7(2)       <---------SPL7   cagaagcttctcgatgcgctacgcttctgtccccgttgcttcaggtaaatctcccgctgttatcagcgttgacgccgtgaaatgatatctcttcggacga  17736000                                                                                        <---------YAB1                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)                 ---------->DOF2            ------>ZmHOX2a(1)                 <<<<<<<<<<MYB80            <-------GAMYB               <---------ARR14(2)                   <------MYB46(1)          <---------ANAC58              --------->ARR14(2)                   <------MYB83      <-----          <---------ANAC58           <---------ANAC58            ---------->DOF2    <---------WOX13(1)     --------->ARR14(2)              <---------ANAC58  <---------AHL20(2)   --------->MYB59    <-----     <---------ARR14(2)              <---------ANAC46 <---------YAB1    <---------TOE2(3)--------->AHL20(2)   gttcgacgataggcgtttgaaaagtctctcgtatgagttgcgtttcctccttgtttattatttgtttaaaagttaagtttggtttgatttattatttatc  17736100  Previous    Next  AGI:  At3g48020.1    Description:  similar to F-box family protein-related [Arabidopsis thaliana] (TAIR:AT5G62860.1); similar to unknown [Populus trichocarpa] (GB:ABK95323.1) Range:  from: 17735575    to: 17736183    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version