Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             ------>ZmHOX2a(2)         --------->ARR11(3)         <---------ARR11(3)         --------->ARR14(2)                                           <-------TEIL         <---------ARR14(2)                                          --------->ARR14(1)    ------>ZmHOX2a(1)                                  --------->bZIP60(2)    =============HOX2a_HOX2a                    <---------ICU4      --------->ARR11(1)    ==============HOX2a_HOX2a                  <---------YAB1       <---------GLK1(2)          ------ ---------ARR10                              --------->YAB1         <---------ARR14(2)         <----- -------ARR14(2)                            <---------YAB1          --------->ARR14(2)        <------ ------>ARR14(2)      <-----------GT1     --------->YAB1          ----------->ARR10       ---------->DOF2 ------CCA1(2)>>>>>>>>>>>>>>>>>LFY --------->LBD16     --------->ANAC46                 <---------ATHB12 -ARR14(2)<------ZmHOX2a(2)       --------->LBD16<----------DOF2--------->TOE2(3) ----------->RAV1(1)   aatctccttaagatccctccattgtaacaatttctccctgaaaattatcatctttacacatcacaacctagattcgacatagacccacaaatcaaagaat  17730600                             --------->DOF5.7(2)                             <---------MYB52(1)                  ----------->GT1                            --------->TOE2(3)                   --------->DAG2                            --------->TOE1(3)                  ---------->DOF2                           ----------->GT1               ----------->GT1               ----------->GT1  <----------DOF2        --------->MYB52(1)            <---------ZAT14            <-------TEIL <----- --->GLK1(2)    --------------------->WRI1     --------->At4g35610               --------->CCA1(2) ------ARR10   --------->ATHB12                <---------At4g35610              <---------ARR14(2) ---GLK1(2)   <---------AHL20(2)          <---------GLK1(1)<---------ZAT6       --------->ARR14(2)   ctaactttcagtctatttcattggacataacgttaattttgtagaattcagcataagtttagtgataaagtagaaacatggagatacagtggaaaattca  17730700                                                                                         <------ZmHOX2a(2)                                                                                        <---------ARR11(3)                                                                                        --------->ARR11(3)                                                                                    ---------->DOF2                 <<<<<<<<<<<<<<<<<LFY<---------ANAC58                         <---------ZAT2     <---------ZAT2                  <---------ANAC58                         --------->At4g35610     --------->ZAT2    <---------MYB46(3)                                     --------->ZAT2   ------     --------->At4g35610   --------->MYB52(2)                                 <---------At4g35610----     <---------At4g35610 <---------ANAC46                --------->ANAC58  =====================HOX2a_HOX2a ------GT1    <------ZmHOX2a(2)      <---------ANAC46    --------->ANAC58  <------ZmHOX2a(1)---------   ctgattcagcagagagatcgaacagtggtttgtttgtttgtgtgtgagataccttgagaacgaaacagtaagggagaggaagctgaaaaagatcgagata  17730800                    <---------RAP2.6(3)                    ------>NtERF2                   --------->ANAC58                   --------->RAP2.3(2)                   --------->DEAR3(1)                   --------->RRTF1(3)                   --------->ATERF1(2)                   >>>>>>>>>AtERF-4                   --------->RAP2.3(3)                   >>>>>>>>>AtERF-3                   --------->RRTF1(2)                   --------->DREB2C(2)                   --------->RAP2.6(2)                   --------->ANAC58                   >>>>>>>>>AtERF-2                   >>>>>>>>>AtERF-5                   >>>>>>>>>AtERF-7                   >>>>>>>>>AtERF-1                   --------->ANAC46                  --------->DEAR3(2)                  --------->RAP2.3(1)                  --------->ATERF1(1)                  --------->RRTF1(1)                  --------->MYB46(3)                  --------->ERF1                 --------->ZAT2                                        <---------CCA1(2)         --------->ANAC58                                          <---------ARR11(3)             ---    ----------->ARR10<------NtERF2                             ---------->DOF2                 ------ --->CCA1(2)     <---------ATERF1(1)                       <----------ID1  <----------DOF2 <--------- ------>DOF2    --------->ANAC46                 <---------TOE1(3) --------->ARR11(3)   <---------ARR14(2) -->GT1  --------->ANAC58                    <----------DOF2--------->TOE2(3)           --------->ARR14(2)   aaagagaagacactctacgagccgccatggatgaaacaagtttcaagctttaagcttcaaaacgtcaaagttcttatcttttattcttcgaattctcctc  17730900                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)                                                                             --------->GLK1(1)                                                                             <---------CCA1(2)                                                                             <---------GLK1(1)                                                                            --------->ARR14(2)                                                                          --------->LBD16                                                                      ------>ZmHOX2a(2)                                                                     --------->GLK1(1)                                                                     <------ZmHOX2a(2)                                                                     <---------GLK1(1)                                                                    <---------ARR11(3)                                                                    <---------ARR14(3)                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)                                                                    --------->ARR11(3)                                                             <---------MYB46(3)                                                          --------->MYB52(1)<---------ARR14(2)  <----                                              ===============================HOX2a_HOX2a   <--------- --->ZmHOX2a(1)                <---------AHL20(2)     --------->GLK1(2) <---------LBD16   <---------- >ZmHOX2a(1)                   <---------YAB1 ==============================HOX2a_HOX2a  ------->MYC3 --GT1                       --------->YAB1   <------ZmHOX2a(1)     --------->ARR14(3)   <-------MYC3   ctcttctctctctctctctgtttgatgggatttataatttgatttgaaggagaaagaatccaacggttgagatctccggatatctctaacacatgtcgct  17731000                                  <---------AtLEC2                              <----------DOF2                          <---------SPL7                          <---------RAP2.6(3)     *TSS                <---------ANAC58                              ------>ZmHOX2a(1)    --------->ZAT6       <---------ANAC58                          --------->ARR14(2)             <-- ------DOF2             --------------->AtSPL3                ---------->ID1  ---------->DOF2     <-- --HVH21           <-----------RAV1(1)                  --------->ATHB12    <---------YAB1       <--- -RAV1(1)  --------------------->WRI1              <---------ZAT14<---------MYB52(1) ---------->DOF2<   taacttacactctcttggtttgtgttgccgtactttgaatggctctatttgactagactgatttgtccgtttcctaatatcaaagacaaaagaagcgatt  17731100                                                                      --------->YAB1                                                                  <---------ATHB51                                                                  --------->ICU4                                                                  --------->AHL20(2)                                                                  <---------AHL20(2)                                                                --------->YAB1                                                          --------->LBD16                                                         --------->HSFB2a(2)                                                         <---------HSFB2a(2)--------->AHL20(1)                                                        <---------LBD16     --------->AHL20(2)                                                       <-------TEIL<---------ICU4                                                      --------->CCA1(2)     <---------AHL20(2)                                                      --------->GLK1(2)     <---------AHL20(1)      -                                                      --------->ARR14(1)   --------->AHL20(2)      --                                  <-----------GT1    --------->ARR11(1)    <---------AHL20(2)-------- -------YAB1                      ---------->ID1     <---------GLK1(2)--------->AHL20(2)    ------->GAMYB -------AHL20(2)            ---------->ID1           --------->ARR14(2)<---------AHL20(2)  <---------MYB52(2) --------TBP   ---------->DOF2<----------DOF2        <---------ARR14(2)--------->AHL20(2)  --------->MYB46(3) ------------CBF           <-----------GT1         ----------->ARR10  <---------AHL20(2)<----------ID1   tttattgcataagagaaaaaagaaatgtttttctttttccctcttagaaaaatgagattcgggaaaaaataattaaaataaattagtaagacaacaaaca  17731200                                                  ------>ZmHOX2a(2)                                                 <---------GLK1(1)                                                <---------ARR11(3)                                             --------->LBD16                                            <---------ANAC46        --------->AHL20(2)                  <---------ANAC58                  <---------YAB1 --------->WRKY38(1)            --------->DAG2  --------->ARR11(3)     ------->TEIL --------->WRKY12        <----------ID1<---------ANAC58                --------->ARR14(2) -------->DOF5.7(2)    --------->CCA1(2)    <---------ANAC58           <---------ARR14(2) ------->TOE2(3)  ---------->DOF2      <---------ANAC58               <---------CCA1(2)             < ->ANAC46--------->AHL20(2)    ---------->DOF2<---------MYB52(1)  <---------ANAC46           <-------   acgttgacaaataaaaaactaaaagataagacaaaaagttgtcttgccgtgatctctgattttttggtatgtgtatccatatgattcagactcaatatgt  17731300                                                               <---------YAB1                                                   --------->AHL20(1)                                                   <---------AHL20(1)                           -----                                                   <---------AHL20(2)                          <-----                                                   --------->AHL20(2)                          ------                                               --------->AHL20(2)                            --------                                               --------->AHL20(1)                           <--------                                               <---------AHL20(2)                          --------->AHL20(2)          <----------DOF2                  <---------YAB1<---------ANAC46                  --------->AHL20(1)   <----------DOF2                        --------->AHL20(2)  <---------ARR11(3)           <---------AHL20(2) ---------->ID1                           <---------AHL20(2) --------->GLK1(1)        --------->ICU4 -----------GT1             <------ZmHOX2a(2) --------->AHL20(2)       <-----------RAV1(1)--------->YAB1 --ARR11(3)  --------->YAB1--------->AGP1--------->AHL20(2)  <---------GLK1(1)    ----------->GT1   tttttcttttttctttcatattagatttagatccaactacaaattaaaattaattaattgtggatatcattttttgtggcaatgtggaaaaattataatg  17731400                                  <---------------AGL15                 <-----------HVH21                                  --------------->AGL15            <-------GAMYB    <---------TOE2(3)            <-----------------AGL3           --------->MYB111(1)  --------->MYB52(1)      ---------->DOF2     <---------ZAT14     --------->MYB52(2)  ---------->DOF2 --------->AHL20(2)          --------->ZAT14     --------->MYB55(2) ---->YAB1        <---------AHL20(2)    <---------AtMYB61         --------->MYB111(2) ----YAB1  --------->ARR11(3)    <---------ANAC58                 <---------MYB46(3)        <-------- ----->GT1 <---------ARR11(3)    <-----------------AGL2          <--------P        <------MYB83 ->YAB1   --------->CCA1(1)      <---------ANAC58                <---------MYB55(1)<------MYB46(1)<-- -YAB1    --------->RVE1(1)--------->DAG2  <---------ANAC46     <---------MYB52(1)--------->MYB59<---   aaaataaaggaaatatctatataaatgcaaaagttgctagttatggtgtgaagtcgttttctaagcggtagttgtgtcatctatttggtatgtttttcat  17731500  Previous    Next  AGI:  At3g48000.1    Description:  ALDH2B4 (ALDEHYDE DEHYDROGENASE 2); 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD). Identical to Aldehyde dehydrogenase 2B4, mitochondrial precursor (ALDH2B4) [Arabidopsis Thaliana] (GB:Q9SU63;GB:Q42090); similar to ALDH2B7 (Aldehyde dehydrogenase 2B7), 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) [Arabidopsis thaliana] (TAIR:AT1G23800.1); similar to aldehyde dehydrogenase [Vitis pseudoreticulata] (GB:AAZ79355.1); similar to aldehyde dehydrogenase 1 precursor [Lotus corniculatus] (GB:AAO72532.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63005.1); contains InterPro domain Aldehyde/histi Range:  from: 17727852    to: 17731005    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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