Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------ARR11(3)                                                                     --------->AHL20(1)                                         <-------MYC3                <---------AHL20(1)                       --------->At4g35610                  <---------At4g35610                       <---------At4g35610                  --------->TGA1a --------->At4g35610                       ----------->RAV1(2)                  --------->At4g35610                       <---------TGA1a   ------->MYC3       --------->O2    <---------At4g35610        --------->GLK1(1)   <---------At4g35610             <---------O2    <---------ZAT2--------->AtLEC2        <---------GLK1(1)   --------->At4g35610             <---------TGA1a --------->ZAT2=========== <-----------RAV1(1) --------->ZAT18------>ZmHOX2a(1)     <-----------RAV1(2)       <-------TEIL ---------TOE2(3)   ----------->HVH21 <---------ALFIN1------->TEIL   --------->ARR11(3)   ------>ZmHOX2a(1)   ctaatgttggatttctgtattagtgacctgagctcatcctgcacatgaacaatacgagcctcaggtgtcaatatcttaagctgagtttcatcctgcaaac  17684100                                                                                  --------->TOE2(3)                    <---------GLK1(1)                                            <---------ICU4                    --------->GLK1(1)                                            --------->YAB1                   <---------ARR14(2)                                            --------->ATHB12                   <---------GLK1(2)                                             <--------HAHB4   ---             --------->WOX13(1)                                                 <---------ATHB12  ---           <------ZmHOX2a(2)                                              <----------DOF2        ----          <---------ARR11(3)                                    <---------SPL7--------------->AGL15         <------ZmHOX2a(1)                                     --------->TOE2(1)--------->ICU4  -----       <---------TOE1(2)                                      ---------->ID1  <---------------AGL15 <----------DOF2   --------->ARR14(2)                         --------------->AtSPL8  --------->At4g35610 =================HOX2a_HOX2a      --------->ZAT18            --------------->AtSPL3  <---------At4g35610   tctctttagcaggatcaatcggattttcgatagagagagcacgatgacactcttgcacaacttcgtcgtactctctctttccatcattagcagcctcgta  17684200                                                                                    <---------ARR14(2)                                                                                    <---------ARR11(3)                                                                                    --------->ARR11(3)                                                                                  ----------->ARR10                                                                                --------->LBD16                                                                   <-------TEIL<---------HSFB2a(2)                                                                 --------->ARR14(2) --------->ARR14(2)                                                      <---------DAG2           <---------ANAC46 <----        XXXXXXXXXXXXXXXXXXXXX>MIR848            <---------ALFIN1 <---------ARR14(2)--------->GLK1(1) ------>ANAC58                        <------ZmHOX2a(1)    --------->HSFB2a(2) --------->HSFB2a(2)  - ------>ANAC58                       --------->At4g35610   <---------HSFB2a(2)<---------LBD16   <---- ----->DAG2 --------->AHL20(2)     <-----------RAV1(2)<----------DOF2     <---------ANAC58      <---- ----->DOF2 <---------AHL20(2)     --------->YAB1    <---------GLK1(2)    <---------ANAC58   <-------   aagcaagttggcataaaaatgcccaaactcaatcgaatcaggagacaactccacagcttttctagcagattcaattgcattccggagatacttctgtttc  17684300       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     --------->AGP1     --------->ARR14(3)     <---------ARR14(3)        --------->ANAC46     --------->ARR11(3)        --------->ANAC58     <---------ARR11(3)    <-----------HVH21     <---------ARR14(2)   --------->TOE2(3)     --------->ARR14(2)   --------->TOE1(3)     <---------AGP1     -------->P  --------->ARR14(2)    <---------CCA1(2)<---------At4g35610             --------->At5g28300                     ------>ZmHOX2a(1)   ----------->ARR10 --------->At4g35610     --------->LBD16                                --------- -----ANAC46        --------->RAP2.6(2)    <---------LBD16                                  --------- -------->STY1(2) --------->At4g35610      <---------ANAC46                   <---------ANAC58 -----ANAC58      <---------ZAT2    <---------ARR14(2) <---------MYB46(3)     <---------ANAC58 -----ANAC58      <---------At4g35610    --------->ZAT18                      <---------ANAC46     <- --MYB52(1)  --------->ETT(2)  --------->ANAC58 <---------REM1(2) <------NtERF2          ------->TEIL   gtagctagatcttcgtagacagcagcaaccttcacgcagatagttccctgaacacggtggattagggcagagtcttgatggcgagagcatgaatccttaa  17684400                                                                                            <--------                          --------->MYB46(3)                                           <------NtERF2                          --------->ANAC58                                             --------->ATERF1(1)                          --------->TGA1a                                             ------>NtERF2                          --------->ANAC46                                            <---------LBD16                          --------->ANAC58                                           <---------ANAC46                     --------->PCF2      <---------ANAC58                          ------->GAMYB                   <---------At4g35610   <---------ANAC58                         <---------DEAR3(1)            <-----------RAV1(1)        <---------ZAT14                            --------->ANAC46     ------->TEIL  --------->At4g35610 --------->ZAT14                          --------->MYB52(1) >TOE1(3) <----------DOF2 ----------->HVH21                                 --------->GLK1(2) >TOE2(3) ==========================bZIP_DOF<---------ZAT18                 <---------ARR14(2)<------ ---------ID1  <---------REM1(1)     <---------bZIP60(1)                    --------->ARR14(2)<------   tgagacgaatcgctttgttgtagctcccacgaccgaatgacttcagtgccttctcgcattcgagcttgatcagagccgaatccaacggcgcgggagcttt  17684500                                                                                          <---------MYB55(2)                                                                                          --------->MYB46(3)                                                                                        ------>NtERF2                                                                                        ----------->RAV1(1)                                                                                      <------NtERF2                                                                                     <---------ATERF1(1)                                                                                <-----------GT1                                                                            <-----------TBP                                                                            --------->AHL20(2)                                                                            <---------AHL20(2)                                                                          --------->AHL20(2)------>MYB46(1)                                                                          <-----------TBP --------->AtMYB61                                                                          <---------AHL20(2)------>MYB83                                                                       ------->TEIL --------->ANAC58                                                                    <---------ANAC46--------->ANAC58                                                                    <---------ANAC55(2)--------->RAP2.3(3)    ----------->HVH21                                              ------->TEIL --------->CCA1(2)  <---------At4g35610                  <---------AHL20(2)          --------->SPL7 --------->ANAC46  ----------->RAV1(2)                 --------->AHL20(2)           <---------TOE1(2)--------->ANAC46  --------->At4g35610 --------->At4g35610                          <-------TEIL<---------ARR14(2) -At4g35610           <---------At4g35610<-----------GT1       <---------------AtSPL3------>NtERF2 ---DAG2--------->MYB46(3)      --------->TOE1(3)            <---------REM1(2) --------->ARR14(2)  -- ----DOF2      --------->ANAC46 --------->TOE2(3)     --------->ARR14(2)<-----------TBP--------->DEAR3(1)   tttcttctgacccatccacgattcagcttaaataccttaattttatcggcatgaagaatactctacgcgtacgtatatatatatacgcgccaccaaatgg  17684600                                               ----------->RAV1(2)                                               <------NtERF2            <---------RRTF1(2)                                             <---------DEAR3(1)         <---------RRTF1(3)                                             --------->DEAR3(1)         <---------RAP2.6(2)                                            <------NtERF2               <---------RAP2.3(2)                                            --------->ATERF1(1)  --------->ANAC55(2)                                           <---------ATERF1(1)   --------->ANAC58                                           <-----------HVH21     <---------ANAC55(2)                                           ------>NtERF2         --------->O2                                           <---------RAP2.3(1)   --------->ANAC58                                          --------->DEAR3(1) <-----------HVH21                                          <---------DEAR3(1) ------>NtERF2                                     --------->MYB52(1)   <---------LBD16                                  --------->At4g35610   <------ZmHOX2a(2)             <------MYB46(1)                                  <---------At4g35610  --------->ARR11(3)             <------MYB83                                <---------WRKY38(1)    <---------ARR11(3)         <---------MYB46(3)                                <---------WRKY12       --------->ARR14(2)         <-----------RAV1(1)                           <---------At5g28300------>NtERF2 ------>NtERF2       <------------CBF                      --------->AHL20(1) <------NtERF2 <---------ARR14(2)    <------NtERF2                      <---------AHL20(1) --------->ATERF1(1)--------->LBD16<---------DEAR3(1)                      <---------AHL20(2)<---------ATERF1(1) --------->ANAC46--------->LBD16                      --------->AHL20(2)<---------RAP2.3(1)--------->LBD16 <---------ANAC46     ----------->GT1 --------->AHL20(2)<---------DEAR3(1)------>ZmHOX2a(2)<---------LBD16          <- --------->ICU4  <---------ARR14(2) ------->GAMYB     <---------GLK1(1)<---------LBD16<---------MYB46(3) -------->DOF2   --------->ARR14(2)--------->MYB46(3) --------->GLK1(1)<---------At5g28300--------->ALFIN1   gcaaagatggtcaaaatcggatattaaattacagtcaacagacggcgtcgcctgagagatcccggccacgtattacggcggagattgttggtgaggggat  17684700                                <---------ZAT18              --------->At4g35610                                --------->ZAT18           --------->At4g35610                       <---------MYB46(3)                 <---------At4g35610                   <------ZmHOX2a(1)                 <---------LBD16                          -------         ----------->GT1        --------->ZAT14  --------->ANAC58                          <--------- --------TOE2(3)<-----------RAV1(2)              --------->ANAC58                 ---------->DOF2   agaggtagagagagtaacacaggagtcgttgttgtgctctctctctctctctcgctacggagcagaagaatgtcactaaaccaaaaaagagatttacatt  17684800                               <---------AHL20(2)                               --------->AHL20(2)                               <---------ICU4                               --------->ATHB51            <---------TOE2(3)                              --------->ICU4               <---------TOE1(3)                              <---------YAB1            <---------AHL20(2)                         ----------->GT1           <---------MYB52(1)<-----------GT1 -->TOE2(3)       --------------->AGL15        --------->MYB52(1)  <----------DOF2<---------ZAT18 --GT1  --------->MYB52(1)  <---------ICU4   --------->MYB46(3)    <---------DAG2 --------->ZAT18   agcgattacaaaccggtttacttcgattagtaattatttctagttgaaccatcggtattttatggtttactttaccagacgaagcgaactactcggtttg  17684900                                                                          ------>ZmHOX2a(2)                                                                        --------->ARR14(2)                                                             --------->GLK1(1)                                                             <---------RVE1(1)                                     <------NtERF2          --------->ARR14(2)                                    ------>NtERF2           <---------ARR14(2)                                   <---------ATERF1(2)      <---------GLK1(2)                      --------->ARR14(2)                    --------->ARR11(3)                      <---------ARR14(2)                    <---------ARR11(3)                   <---------HSFB2a(2)                   <XXXXXXXXXXXXXXXXXXXXMIR780.2                   --------->HSFB2a(2)               <-----------HVH21  <---------ARR14(2)               <----------DOF2     --------->ATERF1(2)----------->HVH21<------ZmHOX2a(1)        --------->At4g35610      --------->ZAT2  <---------ALFIN1--------->YAB1--------->ANAC58      --------->MYB46(3)--------->MYB46(3)      --------->ZAT18 <-------TEIL   --------->ANAC58   cgaattgaaccgctgtgttttttggaaccgctacatgctggcacaacttgcccactgtgacagatattcatcaggatcggcaaggagcatgaggttgtca  17685000  Previous    Next  AGI:  At3g47890.1    Description:  ubiquitin carboxyl-terminal hydrolase-related. similar to nucleic acid binding / ubiquitin thiolesterase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G47910.1); similar to nucleic acid binding / ubiquitin thiolesterase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G47910.2); similar to Ubiquitin carboxyl-terminal hydrolase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94151.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62486.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ72908.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains Range:  from: 17677912    to: 17684515    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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