Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------ALFIN1                                                 ------>ZmHOX2a(2)                                            --------->SPL7                                          ----------->HVH21                                         --------->LBD16                                        --------->HSFB2a(2)                                        --------->LBD16        ===============HOX2a_HOX2a                                        --------->ANAC46       ------>ZmHOX2a(2)                                        <---------LBD16 <-----------HVH21                                        <---------HSFB2a(2)----------->HVH21                               <---------MYB52(1)=============================HOX2a_HOX2a                              <-----------TGA1  --------->GLK1(1)                              <-----------HVH21--------->ARR11(3)                      <---------MYB52(1)                             --------->ANAC46  <---------ARR11(3)                     <-------GAMYB ---------ANAC46             <---------ANAC55(2)<------ZmHOX2a(2)      ------>ZmHOX2a(1)        <---- -------->ALFIN1             <---------ANAC58  <---------ARR14(2) <---------At4g35610 --------------- ---------ANAC58             <---------ANAC58  --------->ARR14(2) <---------ZAT2     <---------MYB46(3) -----------RAV1(1)          --------->ANAC55(2)==============================HOX2a_HOX2a       ----- ---------ANAC58     <----------DOF2   <---------LBD16 --------->DEAR3(1)         <-----------RAV1(1)   ttgtgtggcacattatcggtttcctttgattccgtcactctcccgggacgatctccaccgtctgatcgagctccttcaaaacctctgtcgttgttctcat  17666600                                                                    <---------MYB52(1)          --------->ARR14(2)         --------------->AGL15         <---------SPL7          <---------GLK1(2)          --------->TOE1(3)         <---------ARR14(2)          <---------ARR14(2)         --------->TOE2(3)         --------->ARR14(2)          --------->ARR14(2) --------->TOE2(3)              <----------DOF2          --------->HSFB2a(2) --------->At4g35610 --------->TOE1(3)        ------>ZmHOX2a(1)              <---------HSFB2a(2) <---------At4g35610  --- -----At4g35610     <---------ARR14(2)             <---------At4g35610     <-----------RAV1(2)  ----- ------>WRI1        --------->ARR14(2)             --------->At4g35610--------->MYB52(2)   <---------ARR14(2) ---->At4g35610     <-----------ARR10<---------------AGL15--------->LBD16<-----------HVH21 <---------GLK1(2)   ctcccttaacccgattcccacaaatctcctctctctttacctcaaatagcttctgcttcccagaagaaccgttcgcttcagatggaagaattggattctc  17666700           ------>MYB83                  <---------ZAT6           ------>MYB46(1)              <---------TOE1(3)               <---------At5g28300         ------->GAMYB          <-------TEIL                            <---------LBD16            --        --------->MYB46(3)  <---------TOE1(3)                     <----------DOF2              <----- --->ZmHOX2a(1)             <---------TOE2(3)       <----------ARF1    <-----------GT1    --------->CCA1(2) ------>RAV1(2)     ----------->HVH21   <---------TOE2(3)  ---------->DOF2  <---------DEAR3(1) ------   ctgatcagtaaccaactcagtcttgacgctaaggttcaaattagggttaagggggagacgagaaagggcttttttacggcgatgaagaagagatttgaaa  17666800                                                <------NtERF2                                               <---------HSFB2a(2)                                              <---------LBD16                                 --------->ATERF1(2)                                 --------->DEAR3(1)                                --------->DEAR3(2)                             --------->MYB46(3)--------->HSFB2a(2)                       <---------ALFIN1                     --------->ANAC58         <---------ANAC46    <---------ANAC58     ------>NtERF2   ---------->DOF2   --------->ANAC58     --------->SPL7          <---------ANAC58    --------->DEAR3(1) ------->TOE2(3)  --------->WRKY18(1)     <-------TEIL      <---------TOE1(3)   <---------GLK1(1) ----GLK1(1)     <-----------HVH21      <---------SPL7      <---------TOE2(3)  <---------ARR11(3) --->GLK1(1) --------->MYB52(1)--------->MYB52(1)    <----------DOF2           --------->ARR11(3)<---   tccttgaaagagagattacggtcaggcattatccaccggcgaggtacgtcgggaactttgtgaaggttgcctctgtacatagatatcgccaccatcttct  17666900                                                             <---------DEAR3(1)                                                         --------->SPL7                                                 --------->LBD16                                                <---------ANAC58                                                <---------ANAC55(1)                          --------->ARR14(2)    <---------ANAC58                    <---------ANAC58                          <---------ARR14(2)    <---------ANAC55(2)                 <---------ANAC46                    --------->MYB52(2)          <---------ANAC46                    <---------ANAC58                   --------->SPL7          --------->At4g35610                   ----------->TGA1                <---------ANAC58           <---------At4g35610                   ----------->HVH21            <---------ANAC58         <---------ANAC58  <---------SPL7          <---------ANAC58            <---------ANAC58      <---------MYB52(1)  --------->YAB1           <---------ANAC58    --  <----------DOF2 <---------MYB52(1) <---------ANAC58<---------YAB1            <---------AtLEC2   *TSS ------At4g35610<---------ANAC58 <-------GAMYB  --------->ANAC55(2)  --------->GLK1(1)        -------   tctgcttttgggtttcttccgttcgtcgaattcgccgttgccttctgcttccgtgatcatacggcgatgggatttcgacttgcatgacgttttgctctga  17667000                   --------->MYB52(2)                  <---------TOE1(2)                 <---------MYB52(1)               <---------ANAC46          --------->ALFIN1         ------->MYC3         <-------MYC3                    --------->ARR14(2)        <---------TGA1a                  ------->TEIL        --------->TGA1a                  <---------ARR14(2)        <---------ANAC58           ------->GAMYB                              ----------->GT1        --------->O2         <---------ARR14(2)                           <---------AHL20(1)        ===================================MYC_MYB                     --------->YAB1        <---------ANAC55(1)  --------->ARR11(3)                        --------->AHL20(2)        <---------ANAC46     --------->ARR14(2)                       <---------ATHB12        <---------O2         <-----------ARR10                        <---------ATHB51        <---------ANAC58  --------->ANAC55(2)     <----------DOF2 ------------>CBF            <------ --------->GT1 <---------ANAC58    --------->DEAR3(1)            --------->ANAC58            -------- ---->HVH21    <---------ANAC58   --------->DEAR3(2)             --------->ANAC58   ---------->DOF2   gaggttagaaacgtgtgtcgtttgttttaagtatctaccgacgaatttgggcctttcacccttgcaaacccaataatatatgtttaaaaagcccatttaa  17667100                             <------MYB83                             <------MYB46(1)                            <---------AtMYB61                            --------->MYB111(2)             <---------MYB46(3)                            --------->MYB59                <--------P                            --------->MYB46(2)       <---------LBD16                                -                            --------->MYB111(1)    <---------REM1(2)                       --------->AHL20(2)                   <----------DOF2     <------MYB46(1) --------->LBD16                    <---------WOX13(1)          <---------YAB1    <---------MYB46(3)    <----------DOF2                   <---------MYB52(1) ---AHL20(2)      <---------DAG2       <------MYB83----------->HVH21           <-----------GT1  <---- ->AHL20(2)    <---------ALFIN1   <---------ZAT6  <-----------HVH21   --------->TOE2(3)<---------YAB1   tattcaagaattttgatacaccttttgggtttggtagtgctaggtatcagtgcttcacggggtagttctcaacgttgatattctccgttttgatttattc  17667200                                                                                        <------------                                                                                        -------------                                                                                       <-------------                                                                                       <-------------                                                   <---------GLK1(1)              <------MYB83                                                  <---------ARR11(3)              <------MYB46(1)                                        <------ZmHOX2a(2)                      <---------ANAC58                                       --------->ARR14(3)                      <---------ANAC58                                       <-----------ARR10                   <---------ANAC58                                       <---------ARR14(3)                  <---------ANAC58                                       --------->ARR14(2)                --------->ARR14(2)                                       <---------ARR14(2)                <---------ARR14(2)             --------->ZAT18    --------->At4g35610--------->GLK1(1)     <-----------ARR10        <---------AHL20(2)---------->DOF2------>ZmHOX2a(2)               --------->GLK1(2)      <---------YAB1 <---------TOE2(3) <---------ARR11(3)                --------->ARR11(3)  <---------GLK1(2) --------->MYB52(1) --------->ARR11(3)       ---------->DOF2<---------AtLEC2 -------->LBD16  <------ZmHOX2a(2)     <---------AGP1          --------->LBD16 <---------ANAC46 -------GT1  <---------ZAT18 --------->At4g35610  --------->ARR11(3)     <---------ARR11(3)   tccagattattttagtgcgatctaacgaagaagcagaagaagatctcacttagatatccaaactccgaaagtgagtatcttgcttggtttacttatatgg  17667300                                                      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                             xxxxxxxxxxxxxxxx>smallRNA(si3)                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     ------>MYB46(1)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                     --------->MYB52(1)        <---------ARR11(3)                                     -------->P    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     ------>MYB83 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                     <xxxxxxxxxxxxxxxxsmallRNA(i)                                     <xxxxxxxxxxxxxxxxsmallRNA(s)                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                    <xxxxxxxxxxxxxxxxsmallRNA(i)                                    --------->MYB55(1)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                   <---------MYB46(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                   --------->AtMYB61xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                   <---------MYB111(1)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                   <---------MYB59--------->ALFIN1                   --------->ARR14(1)                                   <xxxxxxxxxxxxxxxxsmallRNA(s)--------->ARR11(3)    --------->CCA1(2)                                  --------->MYB46(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              <------ZmHOX2a(2)                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             --------->AGP1                                 -------->P<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <---------ARR14(2)                                 ------>MYB83xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->ARR14(2)                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              --------->ARR11(3)                                 ------>MYB46(1)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <-----------GT1  <------ZmHOX2a(2)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                              <xxxxxxxxxxxxxxxxsmallRNA(i)    <---------CCA1(2)     <---------ARR11(3)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             <xxxxxxxxxxxxxxxxsmallRNA(s)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                           xxxxxxxxxxxxxxxx>smallRNA(s)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                        <---------ZAT18xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      ----------->ARR10                       --------->ALFIN1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<xxxxxxxxxxxxxxxsmallRNA(fl3)                       xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   --------->ARR14(2)                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------------AtSPL8  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------------->AtSPL8  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---AGL15           <---------DEAR3(1)----------->RAV1(2) <---------ANAC46xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) -->AGL15   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------ARR14(2) ----AGL1   --------->ICU4<xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----AG     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)------>ZmHOX2a(2)   tattgtgagtactaaatattagacggtgggcttccaacctacctggtaataggtggagaggcttatatcttatatataccacttaagatccgatccaagt  17667400                                                                            <---------MYB59                                       ------>ZmHOX2a(2)                    --------->TOE2(3)                                 xxxxxxxxxxxxxxxx>smallRNA(s)               --------->TOE1(3)                                 xxxxxxxxxxxxxxxx>smallRNA(i)              <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                 <---------LBD16                           xxxxxxxxxxxxxxxx>smallRNA(i)                                xxxxxxxxxxxxxxxx>smallRNA(s)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                xxxxxxxxxxxxxxxx>smallRNA(i)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                              xxxxxxxxxxxxxxxx>smallRNA(i)                -------->P                              xxxxxxxxxxxxxxxx>smallRNA(s)                ------>MYB46(1)                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         ------>MYB83                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                          <---------ANAC46                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          <---------ANAC58                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          xxxxxxxxxxxxxxxx>smallRNA(i)            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            <xxxxxxxxxxxxxxxxsmallRNA(s)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            <xxxxxxxxxxxxxxxxsmallRNA(i)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        xxxxxxxxxxxxx        --------->SPL7    <---------ANAC58<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        xxxxxxxxxxxxxx       ------>NtERF2      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     <---------RAP2.6(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    --------->SPL7        xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxx    --------->ATERF1(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    --------->ZAT18      xxxxxxxxxxxxxxx  <-----------HVH21   <-------GAMYB   <------ZmHOX2a(2)          <---------ZAT18   xxxxxxxxxxxxxxxxxx  <---------SPL7     xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------ANAC58--------->ARR14(2)  <---------ARR14(2)       xxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <x <---------ANAC58<---------ARR14(2)  --------->ARR14(2)       xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----   attgggtccggccgatgtggattgggttgagtatgtgcggatcgggctctggtaccatattagattgtggacttccaacctaaaaccaattgacaatatg  17667500  Previous    Next  AGI:  At3g47850.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN75379.1) Range:  from: 17665057    to: 17666998    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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