Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------HSFB2a(2)                         --------->ARR14(2)                         <---------ARR14(2)                       <------MYB46(1)                       <---------ANAC58                       <------MYB83                      <------MYB46(1)                      <------MYB83                    <--------P                  <------MYB46(1)                                            ------>ZmHOX2a(2)                  <------MYB83                                              <------ZmHOX2a(2)                 --------->MYB52(2)                                        --------->ARR11(3)                 --------->MYB46(2)                                   --------->LBD16                 <---------AtMYB61                                   --------->ANAC58                 --------->MYB111(1)                                 ------->GAMYB                 --------->MYB59                                     --------->ANAC46                <---------MYB55(1)  --------->LBD16                  --------->ANAC58               <---------MYB52(1)   --------->At4g35610       --------->At4g35610        ---------->DOF2<---------ANAC58                    <-------TEIL    <---------ARR11(3)      --     ------>ZmHOX2a(2)--------->MYB59 ----------->HVH21<---------TOE1(2)   --------->ARR14(2)     ---    <------ZmHOX2a(2) <---------MYB46(3)               <---------TOE2(2)   <---------ARR14(2)     <-- --->ALFIN1  <---------ANAC58  ---------->DOF2         ------->TEIL --------->MYB46(3)--------->At4g35610 --RAV1(2)   <---------ANAC58--------->LBD16<------ZmHOX2a(1) <---------At4g35610     <---------At4g35610   tttgagatcgcaaaggcgttaggttgggttccgaaaaccgcagacaggaacaaaacgtatgttcatctcaaccgcaagatccctgatgagctcaagtttg  17659200                               ------>ZmHOX2a(2)                              <------ZmHOX2a(2)                              --------->CCA1(2)                             --------->ARR11(3)                             --------->ARR14(3)                             <---------ARR14(3)                                            <---------WOX13(1)                             <---------ARR14(2)                                          --------->ATHB12                             --------->AGP1                                              <---------ICU4                             <---------AGP1                                          ------>ZmHOX2a(1)                             --------->ARR14(2)                                    ----------->RAV1(2)           <---------MYB52(1)<---------ARR11(3)                                    ==================          <-------GAMYB    ----------->ARR10                                    <---------At4g35610 ---->ZmHOX2a(2)       ----------->GT1                                  --------->DAG2  <---------YAB1 ------>At4g35610    <-------MYC3              --------->YAB1    ---------->DOF2--------->GLK1(1)   < -------At4g35610    ------->MYC3--------->At4g35610<-----------RAV1(1)---------->DOF2  --------->ICU4   atctgaactgtctgttatatacacatggtaagatctgcagcaattgcaagaagaatgttgctaaaccaaaagctaaagtggcatctcctgatgattgccc  17659300             --------->ATHB12    <------MYB83 <---------AHL20(2)                         ---------->ID1        <---------YAB1<----    <---------MYB46(3)           --------->YAB1           <-----------RAV1(1)   --------->AHL20(2)    <------MYB46(1)             <---------YAB1          <---------ANAC58        --------->YAB1  -----  <--------P<---------YAB1  <---------GLK1(2)           <---------ANAC58    --------->AHL20(2) ------ ===========RAV --------->AHL20(2)     --------->YAB1 <<<<<<<<<<WRKY63      <---------AHL20(2)<------ -----------RAV1(1)       <---------TOE2(3)    <----------DOF2          <---------YAB1    <---------GLK1(2)   tcttgttggtttttatgatttaatagtttagattatcagaattagaactcttttgttgacttgttgctcttaatctgataaattataaaacagattatta  17659400                        --------->ANAC58                        --------->ANAC46           <---------ANAC58                                       --------->YAB1 -----AHL20(2)          --------->ANAC58                         <-------TEIL----------->RAV1(1) ---->AHL20(2) <---------DEAR3(2)                              <---------GLK1(2)------->GAMYB --->YAB1  <---------ANAC58                                    --------->ARR14(2) ---YAB1   <---------ANAC46         <---------At4g35610        <---------ARR14(2)        <---------ETT(2)   aaatgacacaatcgcgtctgttctatacgacatactcgagctcattagttttgcatccaataccagattcataacatcacaacagaagaggtctacaaat  17659500                                                                                        <------------CBF                                                                                       --------->ATHB51                                                                                       --------->ATHB12                                                                                       <---------ICU4                                                                                      --------->ICU4                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)                                                                          --------->AHL20(2)                                         --------->CCA1(2)                <---------AHL20(2)                                         --------->ALFIN1                 --------->AHL20(1)                                      <---------TOE1(3)                   <---------AHL20(1)                     --------->ICU4   <---------TOE2(3)               <---------YAB1  <---------YAB1                 <--------ZAP1  <---------YAB1                       ------------>CBF--------------->AGL15             <---------LBD16 --------->ICU4                         <-----------GT1<-------TEIL            <---------LBD16  <---------ATHB51                ----------->GT1   <---------ICU4   gtatactatataacttcggggtcaaaatgaaattattcttaaggtatgggtcaaaaacagaaaacgaaaattacaatttaataagttcattattgagaaa  17659600                                     --------->ARR11(3)                                     <---------ARR11(3)                         ---------->ID1                       <---------ANAC58             <----------DOF2        --------->YAB1          <---------ARR11(3)       <---------YAB1                             <----------DOF2       -          --------->ARR11(3)      <---------TOE2(3)                  --------->At4g35610            <        *TSS<---------DAG2       --------->YAB1   --------->MYB52(2) <---------At4g35610        -----      ---------->DOF2  <---------ANAC58     <---------MYB52(1)     --------->YAB1            ------>ZmHOX2a(1)   tttgcagaaaaagaccttttcgatttcgtctccattgatgatattcgatagttagtggctaatttgctatcatctcactgcttcaattttggctcctcat  17659700                                                      <---------TOE2(2)                                                      <---------TOE1(2)                                             ------>ZmHOX2a(2)                          --------->MYB52(1)              --------->ANAC46              <------ZmHOX2a(2)                       <----------DOF2            <-----------GT1                <---------ARR14(2)                  ------->TEIL  --------      <---------ANAC58                     --------->ARR11(3)                  <---------ARR11(1)      <---------ANAC58                     <---------ARR11(3)                 <---------CCA1(2)      <---------ANAC46          --------->At4g35610   --------->LBD16         <---------GLK1(2) -------->ARR14(2)              <---------At4g35610  <-----------RAV1(2)      <---------ARR14(1) ---------ARR14(2)        >>>>>>>>>>GATA-1 --------->ARR14(2)          ------>ZmHOX2a(2)<-----------GT1 ---->At4g35610    <---------ALFIN1   --------->DEAR3(1)         --------------------->WRI1  <-------   cggaaatggcgtttttactcaacacctcgatttcatctcacctccgatcttcttcccaggttttgttcttggatcgaatcgaatctcttttaacggatat  17659800                                                                            <---------TOE1(2)                                                                            --------->LBD16                                                                           <---------ANAC58                                                                           <---------ANAC46                                                         <----------DOF2   <---------ANAC58   <------MYB46(1)                                          <---------At4g35610--------->At4g35610     ------->MYC3                                          --------->At4g35610<---------At4g35610     <-------MYC3                                  <----------DOF2   <------MYB83           <------NtERF2      <------MYB83   <---------GLK1(2)             ------>ZmHOX2a(2)  <------MYB46(1)       <---------LBD16 --------->ZAT2 ->ARR14(2)     <---------YAB1 <---------ARR11(3)  --------->ALFIN1    <-----------HVH21  <---------ZAT2 --ARR14(2)   <---------ICU4   --------->ARR11(3)  <---------AtMYB61  --------->ANAC46--------->ALFIN1   agttcgattcttatatttatgacaaaatcgtttgatctttatgcagaagacggatggtgctttagctcaatcccgtcgcgggttccatgtggagctaggt  17659900                                              --------->ALFIN1                  --------->ARR11(3)          <--------P               --------->At4g35610                  <---------ARR11(3)       <---------------AtSPL8  <-----------HVH21        ---------         --------->At4g35610    <---------CCA1(2)   <------ZmHOX2a(2)  <---------At4g35610<----------ID1         <---------At4g35610  <---------AHL20(2)<------MYB83------>ZmHOX2a(2)             -----------      ---------->DOF2         --------->AHL20(2)<------MYB46(1)  --------->MYB59       ---------->DOF2   gctcgtgagaaagctgtaagtatctcttacatttatatctgttatagggtagggatcagggatcgattcggtcagattagattgtttagaaaaggagaaa  17660000                   <---------AtLEC2               <----------DOF2              ------>ZmHOX2a(2)             <------ZmHOX2a(2)            <-----------ARR10            --------->GLK1(2)            <---------ARR11(3)            --------->ARR14(2)            <---------ARR14(2)            --------->ARR11(3)           <------ZmHOX2a(1)                                                                       --          <---------HSFB2a(1)                                                     ----------->RAV1(2)          --------->HSFB2a(1)                            ---------->DOF2          <---------At4g35610          --------->HSFC1(2)                           --------->HSFB2a(2)        --------->At4g35610     --------->HSFB2a(2)               <------MYB83    <---------HSFB2a(2)        --------->ZAT2  --- -->GT1   <---------HSFC1(2)           <------MYB46(1) <---------YAB1     ----------->GT1         <-- >GT1<---------HSFB2a(2)     --------->YAB1 <---------ZAT6           <---------MYB59      ---------->DOF2   atttgttttggaaggatctttgtatgtcaaatagtaattgtaggtagtgtaattgttctgaaagagcaataccgaatcgaaattagctgaggcaaagagg  17660100  Previous    Next  AGI:  At3g47830.1    Description:  HhH-GPD base excision DNA repair protein-related. similar to DML1/ROS1 (REPRESSOR OF SILENCING1), DNA N-glycosylase/ DNA-(apurinic or apyrimidinic site) lyase/ protein binding [Arabidopsis thaliana] (TAIR:AT2G36490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64394.1); contains InterPro domain DNA glycosylase; (InterPro:IPR011257); contains InterPro domain HhH-GPD; (InterPro:IPR003265) Range:  from: 17658054    to: 17659331    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g47833.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G62575.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64387.1) Range:  from: 17659608    to: 17661125    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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