Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->ANAC58                                  ------>ZmHOX2a(2)                                       --------->ANAC46                                 --------->CCA1(2)                                        --------->ANAC58                                 <------ZmHOX2a(2)                                       ------>MYB46(1)                                --------->ARR14(2)         <---------HSFB2a(2)          --------->MYB52(1)                                <---------ARR11(3)         --------->HSFB2a(2)         --------->AtMYB61                                --------->AGP1       <---------ICU4                 --------->ZAT6                                <---------ARR14(2)   --------->YAB1            <---------ICU4       <                                --------->ARR11(3)   <--------HAHB4            --------->YAB1       -                          --------->WOX13(1)         --------->ATHB12     --------->AHL20(2)       --                    ---------->DOF2                 <---------ATHB12      <---------AHL20(2)       <-          <------ZmHOX2a(2)  --------->YAB1         --------->ICU4       <---------ATHB12------>MYB83   attgagaaacagatcaaaaaccaaaagtcaatgagatctacaatacaatgtggaatcatttccaaaacccttccaataaaatcataacaccaacgtaatc  17650200                <---------MYB52(1)                                     --------->HSFB2a(2)               <---------At4g35610                             --------->YAB1 ---------GLK1(1)                          --------->ZAT6     <---------ATHB12 -------->GLK1(1)            <---------MYB52(1)          <---------MYB59               ---------->DOF2 ------->ARR11(3)      --------->REM1(1)<----------DOF2  --------->TOE2(3)         --------->YAB1 --------ARR14(2)--------->ZAT14    <----------DOF2    ------->TEIL    <---------HSFB2a(2)   agatatcgcatagtttcagttaactacaactgttaagtctttctttcactaaaatcgaacctaaatcatacttcgcgaaaatcaaacataaaagcatggt  17650300                                            <-----------HVH21                                           <---------ANAC46                                          <-------TEIL                                       <---------ZAT2                                       --------->ZAT2                             <---------ZAT14 ---                                  --------->ZAT6        ---------->DOF2           --------->ZAT14 <--     ---------->DOF2<-----------RAV1(2)--------->At4g35610            <---------WOX13(1)   --------->ARR11(3)   tttgacacaaagtagacaaaacccagatgtaattcaacactagctgcgtcgaagagattaaagggcttattgaatgattctaactacagagaagaaattg  17650400                                   ----------->GT1                                ---------->DOF2                        --------->GLK1(1)                        <---------GLK1(1)                               -------->P              --------->DAG2 --------->LBD16                        --------->At4g35610            ---------->DOF2 --------------->AGL15                   <---------At4g35610 <---------GLK1(2)    --------->ATHB12   --------->DAG2    <------ZmHOX2a(2) ------>HSFB2a(2) <---------MYB46(3)    ---------->DOF2   --------->ARR11(3)  <------ZmHOX2a(2) -------HSFB2a(2)--------->ALFIN1 ----------->GT1         <---------ARR11(3) --------->AGP1   ccagaaacttgatacaaaggtggatgatttccccaaaagttaaaaagcgaaactttagaagatcagacagagcttaccagatcaagggctcaaatagact  17650500                                                 ------>ZmHOX2a(2)                                                 ===================================HOX2a_HOX2a                                                --------->GLK1(1)                                                <------ZmHOX2a(2)                       <---------DAG2                                                --------->HSFB2a(1)                    <---------DAG2                                                ====================================HOX2a_HOX2a                                               <---------ARR11(3)                   <-----------GT1                                               <---------ARR14(3)         <------ZmHOX2a(2)                                               --------->ARR14(3)        --------->ARR11(3)                                               --------->ARR14(2)        <---------ARR11(3)                                               <---------ARR14(2)        --------->ARR14(2)                                               <-----------ARR10         <---------ARR14(3)                                               <---------ARR11(1)        <---------ARR14(2)                                               --------->ARR11(3)        --------->ARR14(3)                                              <---------CCA1(2)         <---------HSFB2a(1)                                             --------->LBD16            --------->HSFB2a(1)                    --------->ANAC58        <---------ANAC58 =======================HOX2a_HOX2a                    --------->ANAC58        <---------ANAC46 ------>ZmHOX2a(2)  <--------------------                    --------->ANAC46        <---------ANAC58========================HOX2a_HOX2a               --------->GLK1(1)           <---------LBD16  <------ZmHOX2a(2)------>ZmHOX2a(1)            ------>ZmHOX2a(1)           <---------ANAC58--------->At4g35610  <----------DOF2        --------->GLK1(2)               <---------ANAC58<---------At4g35610------>ZmHOX2a(2)       <---------GLK1(2)     <---------TOE2(3)<---------ARR14(1)       ----------->ARR10<----------DOF2   atcgaataagattcctgatttcaaggaatttgatgtttttgttcttgcggatcttctcagcgatcgcccatggaagatcctttgttttcccttttcttct  17650600                                                                                       --------->LBD16                                                                                      ----------->GT1                                                                                      <---------ANAC58                                                                                      <---------ANAC58                       ------------>CBF                                <---------CCA1(2)   <---------ARR14(2)                 ----------->GT1                             --------->AHL20(2)       <---------ANAC55(2)                --------->DAG2                               <---------AHL20(2)       <---------ANAC55(1)              ---------->DOF2               --------->ARR11(3)   <---------AHL20(2)   --------->ANAC55(2)      <---------ARR11(3)                    <---------ARR11(3) <---------YAB1         <---------ANAC46      --------->ARR11(3)          ---------->DOF2           <---------AHL20(2)    <------------CBF    *TSS------>ZmHOX2a(2)      <---------AHL20(2)         <---------ICU4         <---------ICU4 ----ANAC81  <------ZmHOX2a(1) --------->AHL20(2)     --------->AHL20(2)<---------AHL20(1) --------->ARR14(2)   ctctcgatgatcttaggaaaggcaaaacaatatttaaaaagactgagattttagaattaaaaattattttttcatatatttcaacattgcgtgaatttgc  17650700                                  --------->ZAT6                                <-----------GT1                           <---------AHL20(2)                        --------->YAB1                       --------->AHL20(2)                       <---------AHL20(2)                       --------->ARR11(3)           <xxxxxxx                   <---------AHL20(2)                          --------->YAB1            <-----------                   --------->AHL20(2)                      <---------MYB52(2)    <----------ID1------                  --------->AHL20(2)                  <---------TOE2(3)     <---------ZAT6-----------         <---------ARR11(3)--------->AHL20(2)   --------->AHL20(1)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         --------->GLK1(2) --------->YAB1       <---------AHL20(1)        ----------->GT1------------     --------->TOE2(3)--------->AHL20(2)       --------->YAB1--------->MYB52(1)---------->DOF2-------   tgtataaccaaaatctaatataaaattaataatataacactatattcaaaaatattaagaaactaacatattgaagtagtgaaaagacaaaatggtacaa  17650800                     <------ZmHOX2a(1)          ------->MYC2          ------->MYC3          <-------MYC3                                                   --------->AHL20(1)          <-------MYC2                                                  --------->YAB1         --------->ANAC58                                               --------->AHL20(2)         --------->ANAC58                                             --------->AHL20(1)       --------->CCA1(2)                                              --------->AHL20(2)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                         --------->YAB1 xxxxxxxxxxxxxxxxsmallRNA(le3)                                     <---------AHL20(2) ----AtSPL8--------->ANAC58                                  --------->TOE2(3)              <-------- ----->RAV1(1) ---------->DOF2                               --------->YAB1                <---------AHL20(2) >GT1--------->CCA1(2)                                      ----------->GT1                --------->AHL20(2) --->AtSPL8--------->ANAC58        --------->ALFIN1    >>>>>>>>>>>>>>>>>LFY  <-----------GT1<-------- -->REM1(1)--------->ANAC46        <---------ANAC46  --------->YAB1--------->AHL20(2) <---------ATHB12   cattgagagacacgcgctaaagaggatgtgatgagatgtgtggaagaagagacaataatccaatgttaaaaaaataatattactccaaatgattttaatt  17650900                                                                                     --------->AHL20(2)                                                                     <---------AHL20(1)                           <---------AHL20(1)                        <---------AHL20(2)                           --------->AHL20(1)                        --------->AHL20(2)                           --------->AHL20(2)                        --------->AHL20(1)                          --------->AHL20(2)                     <---------AHL20(2) <---------AHL20(2)                   <-----------GT1                               <---------YAB1     --------->AHL20(2)                --------->YAB1                             --------->AHL20(1)   <---------AHL20(2)              --------->AHL20(2)                           <---------AHL20(2)   --------->AHL20(2)              <---------AHL20(2)  --------->AHL20(2)       --------->AHL20(2)  <---------AHL20(1)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           --------->AHL20(2)      --------->AHL20(2) <-- -AHL20(2)   --------->YAB1<---------AHL20(2)        --------->TOE2(3)<---------AHL20(2)  ----------- -YAB1 <---------ZAT6     <---------AHL20(2)   --------->YAB1  --------->YAB1  <---------AHL20(2)----   gttgaattagtgctataaaaataactaattaaattttaaaatagttttataaaaacataaattttttataatttaatacaaattatttaaaatagtgaat  17651000                                                                   <------ZmHOX2a(2)                                                                  --------->ARR11(3)                                                                  <---------ARR11(3)                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                                                                  --------->AGP1                                                                 --------->GLK1(1)  <-----------GT1    ----------->GT1                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <---------ANAC46                   ------->TEIL  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <----------DOF2 -------TOE2(3)       --------->AHL20(1)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)---------->DOF2 >GT1                 --------->AHL20(2)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->AHL20(2) ----->YAB1           <---------AHL20(2)  --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    --   aatgttttgtataaaacagacaaataaaatagtatagaatgaaactaaatagtatagaacaaaacgtagatccaaatgactgaattaaaccgctttgatc  17651100  Previous    Next  AGI:  At3g47810.1    Description:  MAG1 (MAIGO 1); protein serine/threonine phosphatase. similar to Os02g0265400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046499.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48432.1); contains InterPro domain Protein of unknown function UPF0025 (InterPro:IPR000979); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) Range:  from: 17648107    to: 17650604    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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