Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----           <----------DOF2                                                                     <-----          <---------------AGL15    <---------TOE2(3)                                           ------          --------------->AGL15    --------------->AtSPL8                                      ------         <-----------------AGL1  <---------AHL20(2)                                           <------         <-----------------AG   <---------AHL20(1)                                            -------         ----------------->AGL1 --------->AHL20(2)                                            -------       <-----------GT1          <---------AHL20(2)                                            <------      --------->KAN4(2)    ------>MYB46(1)                                                   --------     <---------KAN4(1)     ------>MYB83               --------->ANAC58                       --------     --------->KAN4(1)   --------->TOE1(2)            --------->ANAC58                <---------GLK1(2)   <---------GLK1(2)<---------WRKY38(1)         <----------DOF2                     --------->ANAC58 <---------TOE2(3) --------->WRKY18(1)    --------->ZAT14      --------->GLK1(2)    --------->ANAC58 ----GT1 <-----------------AGL2 --------->AHL20(1)    --------->ANAC46              --------->ANAC46   atttagattattccttttttggtcaaacctacaatttaatgtactatagtcttttcaagcaagagaatttagctcgaatcaaattcaagaaactcaccca  17645400                                                    <---------PCF2                                                   <---------ANAC58                                                   <------MYB83                                                   <---------ANAC46                                                   <------MYB46(1)                                                  <---------DEAR3(1)                                                  --------->MYB55(2)                                                  <---------MYB46(3)                                                  --------->MYB111(2)                                                  --------->MYB111(1)    ----------->GT1                              --------->ALFIN1 ->MYB46(1)                                    <---------ANAC58 ---->MYB52(1)                                <---------DEAR3(1) ->MYB83                                      <---------MYB46(3)                                   -- --->P----------->GT1                         --------->MYB55(2)                               ------ ------>RAV1(1)                              --------->ALFIN1                                 ------- ----ALFIN1                                 --------->LBD16                                   <------ --->ANAC46                                <---------ANAC58                                 <-------- --->MYB55(1)                              <---------ANAC46                                 --------- ---MYB111(2)                          <------MYB83<---------ANAC58                    --------->O2-- -->DEAR3(1)                           <------MYB46(1)                           ----------->HVH21 -- -->MYB46(3)               <----------DOF2 <---------ANAC58                    <---------ANAC58------ ---MYB55(2)               <---------DAG2 <---------DEAR3(1)                   <---------ANAC58------ ->ANAC58              <---------ZAT18--------->MYB59 <-------TEIL             --------->MYB52(2) --- ->ANAC58      ---------->DOF2       <--------P<---------ANAC58   --------->TOE1(2)    --------->ANAC46   ccagaagagagaaaaatcaaagtagtctactttttgcaagttggtccgtgggtgggtgcatttaagaacgagggacattgttcgtgaccacgagagcacg  17645500 ------->ANAC46 --->ANAC58 -->ZAT18 ---ZAT18 -ZAT18 >ZAT18 ------->ANAC58                                                         --------->YAB1 ------->ANAC58                                             --------->ANAC58 --->ANAC58               ---------->DOF2                   --------->ANAC46 --->ANAC46      --------->AHL20(2)                      <---------REM1(2)                       ---- ---->TEIL      <---------ATHB12             ----------->GT1--------->ANAC58          ---------->DOF2   cacgcataccaaaactcaatgaaatgacaaaagacatataaacaagagagaaaaatgtatacacacaaatagaataacaactattcgtgaaagatagaat  17645600                                                ---------->DOF2                  --------->TOE2(3)    ----------->RAV1(1)                  --------->TOE1(3)    --------->ANAC46                      <---------AHL20(2) ------->GT1 <-----------GT1          --------->MYB46(3)     --------->KAN4(1)   agaaaaattcaaaatatacaccttaaatttcatgtttctacccacaaaaaaaaagaatgtagaacattcaaaaacttatttttttgtatatttctgttaa  17645700                                                           <---------ARR11(3)                                                           --------->GLK1(2)                                                           --------->ARR11(3)                                                        <---------AHL20(2)                                                       --------->YAB1                                                --------->AHL20(1)                                  --------->WRKY18(1) ----------->TBP         ----------->GT1               ---------->DOF2  <----------ID1  <---------ARR11(3)           --------->ANAC58            <---------YAB1   ---------->DOF2    --------->ARR11(3)           --------->ANAC58  *TSS     ----------->GT1     --------->YAB1        --------->CCA1(1)       <---------------AGL15 --------  --------->MYB52(1)  ------>ZmHOX2a(1)        --------->RVE1(1)    <-----------GT1         <--------   aaaacaactgtaatatgaaaagtcctaaaataaaaggtcaagactaaaaatatcttataaaaatctaaaattacaaaacaaggaaaatttgtttatcaaa  17645800                                                      --------->ANAC46                                                    --------->ANAC58                                                    --------->ANAC46                             --------->ANAC46       --------->ANAC58                             --------->ZAT6        <-------TEIL                <---------CCA1(2)              <-------TEIL              <---------CCA1(2)      --------->AHL20(2)                                 <----------DOF2 ->YAB1    <---------ZAT6  <---------ALFIN1 <------ZmHOX2a(1)        ----------->GT1   <------------- -YAB1--------->YAB1<----------DOF2  <---------AHL20(2)----------->RAV1(1)         <----------DOF2<--   gtttgggataatagtcttatctctttcatccacactaatataaataggatacatacacaacacattacaagaagataaatccaaacttttctttctctct  17645900                                             ----------->GT1                                            ------>ZmHOX2a(2)                                           <---------At4g35610                                           --------->At4g35610                                          <---------AGP1                                       <---------WOX13(1)                                     --------->ATHB12                                    <---------YAB1                                    ===============HOX2a_HOX2a                         --------->ALFIN1                                    ------>ZmHOX2a(1)                               <---------At1g77200                                  ------>ZmHOX2a(2)                                 <---------DREB2C(2)                                 <------ZmHOX2a(2)                                  <---------DEAR3(1)                                <---------ARR11(3)                                  <---------DEAR4(1)                                --------->ARR14(2)                  ------->GAMYB   --------->ETT(1) <---------ANAC58               <---------ARR14(2)                 --------->MYB46(3)<---------DEAR3(2) <---------ANAC58               <---------GLK1(2)             --------->ANAC58 <-------MYC3 -----------ANAC81              --------->ARR11(3)            --------->ANAC58 ------->MYC3 --------DOF2                   --------->AGP1        ----------->GT1         --------->ANAC46    <--   ctttcgtttcccattttttctcttattactcatagatcctgattgatctgaaaaaatggtgaagaagcaatcgccattacacgttgtcggtgtgtctgtt  17646000                                                          --------->ZAT18                                           <------ZmHOX2a(2)          <---------At4g35610                         <---------At5g28300            --------->At4g35610        <----------DOF2 --                        <-----------GT1    ===============================HOX2a_HOX2a              <-                 ----------->GT1          <---------ARR11(3)          --------->At4g35610xxxxxxxxxxxx                 <---------ZAT6           --------->ARR11(3)       <------ZmHOX2a(1)  --------->ZAT6 -------YAB1   <---------ANAC46       ---------->DOF2   <---------At4g35610  <---------ZAT6    <-----   ttgatggtgttgttatgcagtgttaattacagtctctgtgaaaagatcaaaacgtataagctcacaagaggaagcttaagtgttactttcactaactatg  17646100      ----------->HVH21    --------->YAB1  <-----------HVH21 --------->bZIP60(1) <---------bZIP60(1) ------->At4g35610         <<<<<<<GRF7                             ------>ZmHOX2a(1) --------At4g35610       ----------->HVH21                         <----------DOF2               <--- xxxxxxxxxxx>smallRNA(si3)<-----------HVH21              <---------CCA1(2)          <-----------GT1 ------RAV1(1)       ------>ZmHOX2a(1)                   ------>ZmHOX2a(1) <-----------GT1       ----   gtgctgtcatgacctctcttctcctccctgacagacatggtctgagtctctcttctctcctatctcatcctttttttttactgatttttctgtgtttcaa  17646200         <----------DOF2                                                  ----------->GT1         <---------DAG2                                            <-------GAMYB  <---------YAB1    -        <---------ANAC58 <------ZmHOX2a(1)                        <---------MYB46(3)          <------        <---------ANAC58--------->LBD16                           ----------->GT1<-----------GT1    < ------ARR14(2)       <---------LBD16                        <---------------------WRI1    <--------- ----->ARR14(2)  <---------YAB1                            <-----------RAV1(1) --------->ICU4 <------   atctgaatttgcttttcttatgattcaggaaaacaagacgatgttgttcttggatttgatactgttgatggttacaaggtaattttcattttcttacttt  17646300  Previous    Next  AGI:  At3g47800.1    Description:  aldose 1-epimerase family protein. similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT5G15140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62527.1); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding; (InterPro:IPR011013); contains InterPro domain Aldose-1-epimerase (InterPro:IPR015443); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding, subgroup; (InterPro:IPR014718) Range:  from: 17645795    to: 17648189    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version