Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <-------TEIL                              <---------ICU4               <---------ANAC55(1)                             --------->ICU4        <---------ANAC46                             <---------YAB1        <---------ANAC58                          <---------YAB1           <---------ANAC55(1)                       <------ZmHOX2a(2)           <---------ANAC58                      <---------ARR11(3)           ----------->GT1  <-------TEIL                      --------->ARR14(3)           --------->ANAC55(2)                      <---------ARR14(3)         <-----------GT1   --------->CCA1(2)                      --------->ARR11(3)      <---------ANAC55(2) --------->ARR11(1)                      --------->ARR14(2)      --------->ANAC55(2) --------->ARR14(2)              ---                      --------->AGP1       --------->ICU4  --------->ANAC55(2)                    ---                      <---------ARR14(2) <---------ICU4    <---------ANAC58                       ---                    ----------->ARR10    <--------HAHB4    <---------ANAC58                       ---                ----------->GT1         --------->ICU4     <---------ANAC46                       <--                ------>ZmHOX2a(2)       <---------YAB1     <---------ANAC55(2)                    --- -------->At4g35610<---------TOE1(2)  --------->YAB1      <---------------AtSPL8                  <-- -------WRKY12--------->ARR11(3)     <---------YAB1<---------ANAC55(2)                            --- -------WRKY38(1)--------->TOE1(2)  <-----------GT1<---------O2   <---------ARR14(2)            <---- -------WRKY45<---------ARR11(3)  <---------AHL20(2)      --------------->AtSPL3           <---------AHL20(2) ->ZAT14 <----------DOF2------>ZmHOX2a(2)--------->YAB1   <---------------AtSPL3           --------->AHL20(2)   tcaactaaattctttagatcgtaagatcttcattattttatcatcattatgtaacgtgattacgtacagatacgagaacatattttcccataaaaaattc  17622400                                   --------->AHL20(2)                               <---------YAB1                            <---------YAB1                            <---------TOE2(3)       --------->LBD16     <-----------GT1      --------->ANAC46 --------->ATHB51     <---------LBD16   <---------ICU4     --------->LBD16   <--------HAHB4 ------>ANAC58         <--------ATHB1 ------>ANAC46         -------->HAHB4 ------>O2             --------->YAB1                                                            <--- ------>TGA1a         <---------YAB1     <---------YAB1              <---------ALFIN1         <------ -------O2            --------->ICU4  <---------ATHB51         --------->KAN4(2)              <------ ------>ANAC58        <---------ATHB51<---------AHL20(2)   <---------At4g35610                <------ -------TGA1a       --------->YAB1 <---------AHL20(2)      --------->At4g35610        <---------AHL20(2) ------>ANAC55(2)----------->GT1  <---------YAB1       <-----------GT1               <-----------TBP -------GT1     --------->ZAT6--------->TOE2(3)      --------->AHL20(2)   <---------TOE2(2) <--------   acgtctccccgtaatcttacagtaataattaacattataaattattctttgtaaaataaacagctcattctccacataggttgaagaatttataggtcgt  17622500                                                                                    <---------ANAC46                                                                                   --------->MYB52(2)                                                                                   <---------MYB46(3)                                                                                   <------MYB83                                                                                   --------->MYB55(2)                                                                                  <---------TOE2(2)                                                                                  <---------TOE1(2)                                                           <---------REM1(2)      <---------AtMYB61                          ----------->GT1                <---------ETT(2)        <---------MYB52(1)                        <---------ANAC58            <----------DOF2             <-------GAMYB                        <---------ANAC46         <-----------GT1               <---------ANAC58 <------ZmHOX2a(2)      <---------ANAC58        <<<<<<<<<<GT-3b            <---------ARR11(3)   ----- ------TOE1(2)       <----------DOF2          <---------YAB1         <---------WOX13(1)         ----- ---ANAC46  <---------ANAC58                <---------AHL20(2)      <------------CBF<-------GAMYB<--- ---ANAC58  <---------ANAC46                --------->ATHB51<---------ALFIN1   <---------ANAC58 ----- ---ANAC58  <---------ANAC58                --------->AHL20(2)  --------->ANAC55(1)<------MYB46(1) ---HVH21 <---------AHL20(2)               --------->ICU4--------->ETT(2)  --------->ARR11(3)   -----   gggatcattcatttacttggaaactttcttgtaaaactacttggaattatttttctttgtcgacacacttaattgaagatttcgttggttgaaattacaa  17622600          --------->YAB1         <---------ICU4        <---------YAB1                                                          <---------YAB1       --------->TOE2(3)                                                       ======================      <---------ICU4                                                           ------>ZmHOX2a(2)      --------->YAB1                                                         ------->TEIL      --------->ATHB12                                                       <---------ARR14(2)     --------->ICU4                                                          <---------ARR11(3)     <---------ATHB12                                                        --------->ARR11(3) ---->ANAC55(1)             --------->ANAC46   --------->ZAT6                <---------AGP1 ---->ANAC58     --------->ICU4               --------->ZAT18    <---------ANAC58 ------MYB52(2)  <---------YAB1   --------->TOE1(3)              <---------ANAC58 <------------CBF ---->ANAC46   --------->TOE2(3)  <----------DOF2            ---------->DOF2 --------->ARR14(2)   <-- ---->ANAC58   --------->YAB1     --------->TOE2(3)  <---------ZAT6 <-----------HVH21          <-----   gtaacaaatcattaataccataattcatggacacaactttaaaaaatgcacactagtggaaataaaagcgtgtcatatggatcttattgtgaattcatca  17622700                                                                                               <-----                                                                                        --------->LBD16              ---------->DOF2                <---------ICU4      ------------>CBF     <---------LBD16 ====HOX2a_HOX2a                            --------->ICU4       <---------YAB1       --------->LBD16 ----ZmHOX2a(1)  --------->YAB1             <---------YAB1     --------->REM1(1)    <---------LBD16-- ----ICU4---------->DOF2            --------->YAB1            <-------TEIL   --------->YAB1--------->GLK1(1)   ggacccaaaacaaaaggaaagataacacagaaaaacaaacaaaatcaagattacaagattaagcttcatcaatggggaatcatgttcccgcgggtttctt  17622800                                                                                              <------                                                                                              <------                                                                                              <------                                                                                         --------->YAB1                                                                                        <---------ATHB12                                                                                        <---------AHL20(2)            <---------ANAC58                                                            --------->ICU4            --------------->AGL15                                            <---------ICU4   -------            <---------ANAC58                                                 --------->YAB1 <--------   --------->ANAC58      --------->ARR11(3)                                 --------->ICU4  <--------   --------->ANAC58      <---------ARR11(3)                               --------->YAB1<---------ATHB51 -----DOF2  <---------ANAC46                                            <---------TOE2(3)<---------ICU4 ------->ANAC46      ---------->DOF2     --------->ALFIN1            <---------AHL20(2) --------->AHL20(2)   tacgcaggctaattccttgtttagaaagaacttaacatatcaggtttggccaaacaattcatgtgttatattttaagaataatggtgcaaataattactt  17622900                                                                                     <---------WOX13(1)                                                                                   <---------ICU4                                                                                   --------->ATHB51                                                                                   --------->ATHB12                                                                                  --------->ICU4                                                                                  <---------YAB1 ----                                                                                  <---------ATHB51                                                                                --------->TOE2(3)----                                                                               <-----------------AGL3                           --------->ARR11(3)                 --------->ARR11(3)--------------->AGL15      >>>>>>>>>>>>>>>>>LFY <---------ARR11(3)                 <---------ARR11(3)<---------------AGL15 ---ANAC58              <---------AHL20(2)                   <---------CCA1(2) ----------------->AGL3 ---ANAC55(2)           --------->AHL20(2)                 --------->YAB1      <-----------------AGL2 ---ANAC58              --------->YAB1                     --------->AHL20(2)  ----------------->AGL2 -->ANAC55(2)          --------->ICU4                      <---------AHL20(2)  <-----------------AG ---GT1           ----------->GT1<----------DOF2          --------->ICU4    --------->CCA1(1)    ---- -AHL20(2) ----------->GT1<---------CCA1(2)          ----------->GT1        --------->RVE1(1)  ------   gatacaaaatccattgtaaaatgtaattatatcttctttttttttttggtttaaaatgtaattatatcttgatactaaatatccataattggtttagaaa  17623000                       ---------->CDC5          --------->ZAT14                    <---------At4g35610         <---------ZAT14                                    <-                  <---------DEAR3(1)            <---------SPL7                                     -- ----->ANAC58    <-------TEIL                  <---------ANAC58                                    <- ----->ANAC58  <---------SPL7   ------>ZmHOX2a(2)   <---------ZAT6                           <------- ----->ANAC46 <---------HSFB2a(1)              <---------ANAC58                         --------->AHL20(2) --->MYB52(1) --------->HSFB2a(1)  <----------DOF2--------->SPL7                      ----------->GT1   cggaacatatggagcaacgttcggctcatcgtgatccctttctacctctgcgtactgctagttggcattcaagtcttgttcgatacacaagttaataact  17623100                 <---------MYB46(3)                                <---------RAP2.6(2)               <-------GAMYB                              ---------->DOF2              <---------MYB46(3)                      ------>NtERF2<---------ANAC58 --------ZAT2--------->ALFIN1                        --------->LBD16                          ------>MYB46(1) ------->At4g35610        ------->TEIL             <---------LBD16 <---------ANAC46           ------- --------At4g35610      <-------TEIL         --------->At5g28300   <---------ANAC58           ------- ----GT1     <---------AtMYB61              ----------->GT1       <---------LBD16             ------>MYB83   ctgctgataatcgatgtggttgtcgatgcatcgacaaaaatggagatggtaaatgcggacaaaagagttgcggtttacaatattcgtctcaaaaccaagc  17623200                       <---------ALFIN1                    --------->ANAC46                   ------->GAMYB                 -------->P                        --------->LBD16                 ------>MYB46(1)                  <---------ANAC58                 ------>MYB83                     <---------ANAC58                  ----------->HVH21         <----------DOF2                   --------->ANAC55(2)                     --------->At5g28300        <---------ANAC58                 <-----------GT1                      ----------->HVH21        <---------ANAC58  --------->AtMYB61<---------ANAC55(2)          <---------YAB1      <-------- <----------DOF2<---------ALFIN1      <---------MYB46(3) ------>ZmHOX2a(1)  ------>ZmHOX2a(2) -->ANAC58     <---------ALFIN1      <---------MYB52(1)  ==========================HOX2a_HOX2a -->ANAC58   --------->ANAC46       <-------GAMYB<---------LBD16      <---------At4g35610   ---------   cttcttttgtgctttccccaaccctccaccattgctcccgttgttacatattccgcgtcctgaaactcgttcttctgatcgtgaccgtgactcgtgcaga  17623300  Previous    Next  AGI:  At3g47760.1    Description:  ATATH4 (ABC2 homolog 4); ATPase, coupled to transmembrane movement of substances. similar to ATATH3 (ABC2 homolog 3), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G47750.1); similar to ATATH5 (ABC2 homolog 5), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G47770.1); similar to ATATH6 (ABC2 homolog 6), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G47780.1); similar to hypothetical protein OsI_028133 [Oryza sativa (indica cultivar-group)] (GB:EAZ06901.1); similar to putative ABC transporter [Oryza sativa (japonica cult Range:  from: 17622772    to: 17627624    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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