Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <----------DOF2     ------>ZmHOX2a(1)    <---------ALFIN1  ------>ZmHOX2a(1) <---------ALFIN1 ---->NtERF2 --------ATERF1(1) ------>DEAR3(1) ----->ATERF1(1) ---NtERF2 ->NtERF2                                                       <---------AHL20(2) -----ATERF1(1)                                                 --------->AHL20(2) -----RAP2.3(1)                                                 --------->ARR11(3) --->DEAR3(1)                             <---------GLK1(2)     <---------AHL20(1) ----DEAR3(1) <---------MYB52(1)    --------->YAB1              --------->AHL20(1) ----HVH21   --------->LBD16<---------AHL20(2)                  <---------ARR11(3)               ---- --ATERF1(1) <---------At4g35610   --------->ICU4      --------->MYB52(1)                      <----- >DEAR3(1)  --------->ANAC46--------->AHL20(2)      --------->YAB1                    <------ZmHOX2a(1)   cctcctcctcctttccgctatctgaatgaattaaacaattatcaaattctcaaattataacgggaatatattcaatcttccatcaccaggactgaattta  17597200                                                                         <------NtERF2                                                                        --------->LBD16                                                                       --------->ALFIN1                                                                     <---------ANAC46                                                                     <---------bZIP60(2)                                                                  ----------->TGA1                                                                  ----------->HVH21                                                                ----------->RAV1(2)                                                                <--------------OsCBT                                                               ------->TEIL                                                            --------->ANAC58                                             --------->YAB1 --------->ANAC46        ------->GAMYB                                           --------->GLK1(2)--------->ANAC58      >>>>>>>>>MYB98                                     --------->LBD16     --------->TOE2(2)       --------->MYB52(1)         --------->REM1(1)          --------->HSFB2a(2)  --------->TOE1(2)      ----------->HVH21 ----->ANAC55(2)                    <---------HSFB2a(2) --------->YAB1<---------LBD16 ------GT1----------->RAV1(1)   --------->REM1(1)      <---------ATHB12<----------CDC5   catatttgactacaacatttcaagaacataatctacatccagaagaatcgtgatgaaatcatacgaacctgacgcggagcgagtaacggaggtagaagaa  17597300                                                 ------>ZmHOX2a(2)                                                <------ZmHOX2a(2)                                            ------>NtERF2                                           --------->ANAC46                                        ------->GAMYB                                        --------->At1g77200                              <------NtERF2                                        --------->DEAR4(1)                   ----------->HVH21                                        --------->DEAR3(1)                  <---------MYB59                                        ----------->HVH21                  --------->At4g35610 <-----                                       --------->MYB46(3)                  <---------At4g35610-------   <------ZmHOX2a(2)                   --------->DEAR3(2)         <---------At4g35610--------->At4g35610  <---------ARR11(3)                 --------->AtMYB61            --------->At4g35610<---------At4g35610  --------->ARR11(3)                --------->MYB46(3)           --------->ANAC58    --------->ZAT2 <---------GLK1(1)     --------->TOE2(3)--------->DREB2C(2)      --------->ANAC58    <---------ZAT2<-   gagagatcagccaatttggcattaacctcgaaaaatagaccaccgacgcgatcggaaaacgaagcgtaagcagcgagacctgactcgagctggcgattta  17597400                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)                                                                              <---------GLK1(2)                                                                          <---------LBD16                                                                          --------->LBD16                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                        ------>ZmHOX2a(2)                                                                        <-------TEIL                                                                       --------->CCA1(2)                                                                      <---------ARR11(3)                                                                      --------->ARR14(2)                                                                      <---------ARR14(2)                                                                     --------->GLK1(1)           ----  ------>NtERF2          <---------GLK1(1)                           <---------GLK1(1) --------->ARR14(2) --------->LBD16         --------->GLK1(1)                          ----------->ARR10  <---------ARR14(2) ----AHL20(2)  ------>ZmHOX2a(2)                    <---------ARR14(2)--------->ARR11(3)         <--- -->AHL20(2)  <-----------------AG                  --------->ARR14(2)--------->AGP1   ------->TEIL - --------LBD16<-----------------AGL1     <---------LBD16--------->LBD16<------ZmHOX2a(2)<---------At4g35610   atccggccaatctctgatccaattcggaaatctccgtctgtaactcggaaaccagacccgtagaatgagagagatccgtggattctttgaatctgccatc  17597500          --------->MYB52(1)   ----------->GT1     --------->GLK1(2) ----->HSFB2a(2)  --------->LBD16                      ------>NtERF2          <------NtERF2 ------HSFB2a(2)<---------At4g35610                ------>ZmHOX2a(2)   <---------O2 --------->DOF2 --------->At4g35610        <---------MYB46(3)      <-------TEIL     <-------TEIL  ---   gagaaagctaaataccgaagcggagaagctcgagacctgtggaagtggtttgatcgcctccatttgcgattcgtcgtggcctcagtttcatcaagaacaa  17597600                         <---------ARR14(2)                  ========================================                         --------->ARR14(2)                 <---------ANAC58                         --------->ARR11(3)                 <---------ANAC46                         <---------ARR11(3)        <---------DOF5.7(2)                       ----------->ARR10       <---------ZAT6--------------->AGL15              <-------GAMYB              <---------LBD16    <---------ANAC58          <---------PCF2-         *TSS<---------ANAC58        <---------ATHB12       ----------------->AGL1    --------->ZAT18 ------>YAB1 <---------ANAC58    ------------>CBF--------->DOF5.7(2)      <---------LBD16          --   tgaaaaattgaaatttcgttggaagaagatactgagtcaatgactcggagtgttaacgagttgcgagttttggtaactcggattaatgggccctggttaa  17597700                          --------->AHL20(2)                        <---------ANAC55(2)                        --------->ANAC58                        --------->ANAC58                 ==================================================================MADS_MADS                 <---------------AGL15                                              --------->ZAT6                >>>>>>>>>MYB98                                                   --------->YAB1               <-----------GT1                                                   <---------ICU4 ================================MADS_MADS                         <----------DOF2 <---------YAB1   < ---------->RAV1(1)     ----------->GT1                            <---------------AGL15   --------->ARR11(3) ------->ZAT18<-----------GT1  --------->AHL20(2)   ---------->DOF2--------------->AGL15   <---------ARR11(3)   gcccacaaaaatgtttttaacatatcaagtaaattaaaactgtaatggcattctcaaagaaatgacattcttttatcggaaaattatcactaaaatctcc  17597800                                                 <---------AHL20(2)                                                 --------->AHL20(2)                                            --------->ANAC58                                            --------->ANAC58                                            ----------->GT1                                        ------->GAMYB                                       --------->ANAC58                                     --------->MYB52(1)                                       <------                                   --------->MYB46(3)                           <---------AHL20(2)                        <---------GLK1(2) --------->MYB52(1)                   <---------ATHB12                     --------->AHL20(2)--------->ANAC58        <---------TOE2(3)<---------ICU4------- ----------DOF2      <---------AHL20(2)--------->ANAC46      <---------AHL20(2)--------->AHL20(2)   <   aacttttatttgaaaacatttgtttaaattctcaacatccaacgaaacgaaataaatatcaaatttatgttgatttttctaataaatatcaaacttatgt  17597900                                                                                 --------->AHL20(1)                                                                                 <---------AHL20(1)                                                                                 <---------AHL20(2)                                                                       <---------MYB52(1)                                                                       --------->DOF5.7(2)        ---         <---------AHL20(2)                                           <-------GAMYB          <-------         <---------ICU4                                              <---------ANAC46   <---------AHL20(2)        --------->AHL20(2)                                        --------->GLK1(2)     <---------YAB1   --------->YAB1                                                --------->ARR14(2)  <---------AHL20(2)   --------->TOE2(3)          --------->YAB1                     <---------ARR14(2)  --------->AHL20(2) ---ANAC55(2)     <---------ARR11(3)                        --------->MYB52(1)   --------->AHL20(2) -->ANAC55(2)     <---------AHL20(1)           <---------YAB1    <---------GLK1(2)<---------AHL20(2) ----------DOF2   --------->AHL20(1)        --------->ICU4  <-----------GT1     --------->AHL20(2)---   gactttcttaataaatacaaaatatttgctaatggtcatattagacatgatgttaagtagattaacagattccgttaacaaaattaattttttattaaca  17598000                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                           --------->HSFB2a(2)                                                  <----                           <---------HSFB2a(2)                                                  -----                       <----------DOF2                                                         ------                      <---------ANAC58                            ----------->GT1            --------                 --------->ATHB12                                 <----------ID1             --------                 --------->ATHB51                             =======================================   <---------MYB52(1) <---------ANAC58                        ---------->DOF2            ---------->DOF2 --------->ANAC46<---------ICU4                         --------->YAB1               <----------ID1 ----->P        --------->ICU4           --------->TOE2(3)<----------ID1          xxxxxxxxxxxxxxxxxxx ----GT1       --------->TOE2(3)<----------ID1       <---------HSFB2a(2)  <----------ID1 ============ ------>MYB52(1)<---------YAB1--------->YAB1         --------->HSFB2a(2)------------------------>ANAC81   tacccgttaattcaaaacattattgctttctataacaacaaaacgttattgttttctataacaacaaagcgaaaaaaaaacaaaaaaaaaacaaagtgac  17598100  Previous    Next  AGI:  At3g47700.1    Description:  MAG2 (MAIGO2). similar to chromosome structural maintenance protein-related [Arabidopsis thaliana] (TAIR:AT1G08400.1); similar to hypothetical protein OsJ_008100 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24617.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62533.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67279.1); contains InterPro domain RINT-1/TIP-1 (InterPro:IPR007528) Range:  from: 17594586    to: 17597609    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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