Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------GLK1(2)                                                               ------>ZmHOX2a(2)                                                              <------ZmHOX2a(2)                                                             --------->ARR14(2)         ---------->ID1                                      <---------ARR14(2)                   ---   --------->GLK1(2)                                         <---------ARR11(3)                   ---   --------->ARR11(3)                                        --------->ARR11(3)                   ---   <---------ARR11(3)                                        <---------AGP1           --------->TGA1a   --------->ARR14(2)                    <-------MYC3        --------->AGP1           --------->ANAC58   <---------ARR14(2)                    ------->MYC3      ----------->ARR10          --------->ANAC58  <---------GLK1(2)    <----------DOF2  --------->ANAC46 =======================================bZIP_DOF --------HVH21      <-----------GT1     --------->O2----------->RAV1(1)    <---------LBD16       ---- ----MYB46(3)  <---------YAB1         <---------ALFIN1   ---------->DOF2  <---------LBD16       <----   gtcagaatcttgttgttatgtttttctttattctctcgctccacgtttcaaatccaacacaaagatctgtctgattctcgggagagtcaagtcagaaacc  17581900                                                     <---------MYB52(1)                             <                                                    --------->LBD16                      <---------AHL20(2)                                                   <---------ANAC58                     <---------ARR11(3)                                                   <---------ANAC58                     --------->ARR11(3)                                                   ----------->GT1                      --------->AHL20(2)      <---------ARR11(3)                           <---------ANAC46                     <---------AHL20(2)      --------->ARR11(3)                           <---------ANAC55(2)                  --------->AHL20(1) --->MYB46(1)                                      --------->ANAC55(2)          --------->LBD16   <-- ------>MYB52(1)                                   <---------ANAC55(1)         <---------HSFB2a(2)<-- --->MYB83                                    --------->MYB52(2)  <---------ARR14(2)    <---------AHL20(1) ----->MYB55(1)                               <---------MYB46(3)  --------->ARR14(2)   --------->AHL20(2) -----MYB59                               <---------YAB1         <------ZmHOX2a(1)   --------->AHL20(2)   taacgagggatattagttcgtctaaattgctccaagctcaacatatgtttgttccgtaatttcaataggattcgatttgttccacaaaaatatattttcg  17582000                --------->ANAC58          --------->LBD16        <---------LBD16        --------->SPL7       --------->ALFIN1      <---------SPL7     <---------bZIP60(2)     <---------ANAC58                              ------------>CBF                      ----------->GT1     <---------ANAC46       <---------ANAC58       <---------YAB1                   --------->ATHB12     <---------ANAC58       <---------ANAC58     --------->YAB1          --------->LBD16 <------MYB46(1) -----------RAV1(1)        <-------TEIL  <---------YAB1        <---------ANAC46  <---------At4g35610 --------DOF2   --------->ANAC58       --------->YAB1     ------>ZmHOX2a(1)<------------CBF    <----- ----------CBF  --------->ANAC46      <---------YAB1 --------->WOX13(1)<---------LBD16   <------MYB83   cattgtggcgtgcggaacaaggaactaggtgcgtttctctatgatttttgatcatcaatcctgttttgtgtaatccgcattgtagatgatttggttattt  17582100                      ------->TEIL                        --------->ICU4                   <---------YAB1               --------->At4g35610         <---------TOE2(3)                 --------->YAB1              ---------->DOF2      --------->O2                   <---         ----------->GT1                  <------ZmHOX2a(1)       <---------O2                   ---- ------GT1      --------->ICU4    --------->GLK1(2)     ----------->GT1--------->ICU4     ---------->DOF2   ctatatttcaagggaaaaatgatgaatgcaaatgcgattccataggagaaagcagaagtagttattagacgtcttgatgaggttttcgattcgaaagctt  17582200           <----------DOF2       ----------->GT1      ------->TEIL            --------->DAG2      <---------ANAC46                                ---     <---------GLK1(2)       --------->DAG2       <---------ANAC58                               ----     --------->ARR14(2)     ---------->DOF2       <---------ANAC58 <-----------RAV1(1)           <--- ---------->DOF2     ---------->DOF2      <---------AHL20(2)    --------->GLK1(2)        <---------ANAC58 ------TOE2(3)   <---------GLK1(1)       --------->AHL20(2)     --------->ARR11(3)       <---------ANAC46 ----->MYB59     --------->GLK1(1)      <---------YAB1 <------------CBF                  <---------ANAC58   aggtaaagaacctctttggatatcaaaggcaaaaggggttttattatatggggcgagcattgggattatctggtgctcaaaacttggaatggcttgtttc  17582300           ----------->RAV1(1)     --------->ALFIN1                                       =====================HOX2a_HOX2a --------->ZAT14                                            <------ZmHOX2a(2) <---------ZAT14         <---------KAN4(2)                 <---------ARR11(3) ------>LBD16    --------->CCA1(2)                         --------->ARR11(3)          <----------DOF2 ----->HSFB2a(2)--------->ARR14(2)  <---------MYB46(3)   --------->ICU4    ---------->DOF2 ------HSFB2a(2)<---------ARR14(2)  --------->MYB52(2) ---------->DOF2    ------>ZmHOX2a(1)   cagagaagtgttcccacagatagggagaatgagcaggtttgttccaaactctcttagtaaagatcatcttcaattcctaaagtttgattcttttggcata  17582400                                                            --------->ALFIN1                                                           --------->LBD16                                                          <---------ANAC46                                                          ==================================bZIP_DOF                                                          ==================================bZIP_DOF                                                          <---------TGA1a                                                          --------->DEAR3(1)                                                          --------->O2                                                          --------->TGA1a                                                          <---------O2                                                         <------NtERF2                                                         --------->ATERF1(1)                                                        ------>NtERF2                                                        <---------ATERF1(1)                                                        <------NtERF2                                                       --------->RAP2.3(2)                                                       --------->RAP2.6(2)                                                       --------->DEAR3(1)                                                       <---------DEAR3(1)                                                      --------->SPL7--------->TOE2(3)    <----------DOF2                                         <----------DOF2<---------RAP2.6(3)          <---------RAP2.6(2)                                         ===========================bZIP_DOF        --------->RAP2.6(3)                                   <---------ANAC58   --------->RAP2.3(1)        <----------DOF2 ----                            ========================================bZIP_DOF     <---------DAG2  <---                    --------->GLK1(2)<---------CCA1(2)--------->ATERF1(1)       <---------DAG2   ----                    --------->ICU4 <---------ANAC58<---------RAP2.6(2)        <-----------------AGL1       <-----------RAV1(2)  ---------->DOF2       --------->RAP2.6(3)       <-----------GT1      <---   aaacttggttcaggcgatagcaattctgaagaaaggggcttatcttttgaaatacggccgccgtgggaagcctaaattctacccttttcggctttcaagt  17582500                                                                                         <---------AHL20(2)                                                                                        --------->ARR11(3)                                                                                        <---------ARR11(3)      --------->YAB1                          <---------YAB1                            <---------AHL20(2) --------->ICU4                             ----------->GT1                             <---------AHL20(1) ----->ZAT14                            <---------YAB1                                  --------->AHL20(1) ------ZAT14                       --------->At4g35610                          <------ZmHOX2a(1) <-- ----->ZAT18                       <---------At4g35610                       <---------AtLEC2     <-- ------ZAT18--------->TOE1(3)   ---------->DOF2                         <----------DOF2 --------->AHL20(2)   gtactaattcataaccttcagtcacagtttatttcaaagctgaagattgtgatttgatagtggttttctcaaaacttttgcaggatgaaatatatttgtt  17582600                                                   --------->YAB1                                                  <------ZmHOX2a(2)                                                 --------->ARR11(3)                                                 <---------ARR11(3)      ----------->GT1      <------            ---------->DOF2                     --------->YAB1   --------->ZAT14          <---------ICU4       ----------->GT1                        --------->ANAC58   <---------ZAT14          --------->YAB1      <---------TOE2(3)                       --------->ANAC58 --------->At4g35610        <--------HAHB4 -------TOE2(3)<----------ID1            ----------->HVH21     <---------At4g35610      ------->TEIL -------TOE1(3)----------->GT1       <---------ZAT14   ----------->RAV1(2)----------->GT1<---------ATHB12   atggtattgtggtaaaaaggagaaacgtcttaaactgagttctgtgacaaggatcatacctggacagcgaactgtaagttaaaatgtatgaatcatttta  17582700                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                      ------>MYB46(1)                                                                                      ------>MYB83                                                                                     --------->ANAC46                                                                                    <---------MYB55(2)                                                                                    ------->GAMYB                                                                                    --------->MYB46(3)                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                               <----------DOF2 ------>ZmHOX2a(1)                                                              <-------GAMYB   --------->TOE2(3)                    <---------GLK1(1)                       <---------DEAR3(1)--------->TOE1(3)                    --------->GLK1(1)                   --------->HSFB2a(2)   --------->ANAC46                   <---------ARR14(2)                   <---------HSFB2a(2)--------->ARR14(2)                   --------->ARR14(2)              <----------DOF2         --------->ARR11(3)               <---------At4g35610                 <---------DAG2          <---------ARR11(3)           <-----------RAV1(1)                  --------->ARR11(3)        --------->GLK1(1)  <--------P--------->At4g35610                 <---------ARR11(3)        <---------GLK1(1) ---AHL20(2)<---------At4g35610       <---------YAB1    <-----------RAV1(2)<---------ARR14(2)      --   tctggtaactgttttgctgcagatttctgaacagaagaatgttattgtaagaacttttccaggcggttttccgacgatatcctcaacccaccaaggaata  17582800  Previous    Next  AGI:  At3g47660.1    Description:  regulator of chromosome condensation (RCC1) family protein. similar to Ran GTPase binding / chromatin binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G19420.1); similar to Ran GTPase binding / chromatin binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G12350.1); similar to zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT1G69710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48412.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16844.1); contains Inter Range:  from: 17582289    to: 17585790    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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