Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------GLK1(1)                                                                    --------->YAB1 --------->GLK1(1)                                                                    --------->TOE1(3)                                                            --------->ICU4      ------->GAMYB                                                        --------->ZAT18      ========================RAV                                                     <---------ANAC46        ----------->RAV1(1) -----YAB1                            <---------CCA1(2) <---------ZAT14      --------->MYB52(1) >ARR11(3)                    ---------->DOF2   --------->MYB52(2)  --------->TOE2(3)    <-----------RAV1(2) -ARR11(3)        ----------->GT1 --------->ARR11(3) <---------ANAC58       --------->ANAC46   <----- >ARR10          ----------->GT1  <---------ARR11(3) <---------ANAC58     --------->ANAC46  <------ZmHOX2a(1)   cacagagagttttcatgagaagataaaaaaaaaaaagaccttatcttggttatttgggtgcaatgttgaaccataaacacaacagaaatccacaggagga  17576100                                                                                             <-------                          <----------DOF2               <-----------GT1                      --------                   <---------At4g35610     --------->AtLEC2                ----------->RAV1(2) -ZmHOX2a(1)    ---------->DOF2       <-----------GT1--------->YAB1        <---------At4g35610   agaacacttaagaagctcgaaagctcatctttttgagtagtttccattcagacaaaaataacccttgtaatgtattcaactgggcagacctattcagatg  17576200                     <---------At4g35610                <--------P        <<<<<<<<<<WRKY26           ---------->DOF2        <<<<<<<<<<WRKY38         --------->AHL20(2)       <<<<<<<<<<WRKY43         <---------AHL20(2)     ----------->GT1         --------->YAB1         <------MYB46(1)   --------->ANAC55(1)          <------MYB83                                           --------->ATHB12   --------->ANAC55(2)    <---------WOX13(1)                                          <---------YAB1   <---------ANAC55(2) <---------YAB1                                                <---------ARR11(3)   ----------->GT1 <---------ANAC58                           <---------TOE2(3)      --------->ARR11(3)   --------->ANAC58<---------ANAC58                          ---------->DOF2        --------->YAB1   --------->ANAC58<---------ANAC46                         --------->AHL20(2)     <---------YAB1 --At4g35610 <---------TOE2(3)<---------WOX13(1)            <---------AHL20(2)     --------->ICU4   < ->At4g35610 --------->DAG2 --------->ATHB12   <---------ANAC46                 <-------TEIL   <-----   aagaaacgtaataaaaaggttgcttctgatagattggtcaaatttgatttcgagtaatctaattaaagtttctacaattaagttcatgatcatttgatca  17576300                                                                       <-------GAMYB                                                                      <---------MYB46(3)                                                                      --------->MYB55(2)                                                                      --------->MYB46(2)                                                                    <---------MYB52(1)                              --------->DAG2              --------->ICU4                     --------->TOE2(2)              <------ZmHOX2a(1) --------->MYB52(2)   <---------GLK1(1) --------->TOE2(3)      --------->ANAC58  <------ZmHOX2a(1)                  ---- ---------YAB1       --------->TOE1(2)<------ZmHOX2a(1)<------ZmHOX2a(1)                         ---- ----ICU4 <---------WOX13(1) ---------->DOF2--------->ANAC58--------->MYB59                      <---   ttttgatttcagattgacacaaaccttggaaaaaaggagaggaacgaagccagaggaggaattaggaagcgttagttgatttaagaggggaattgaagaa  17576400                         <---------ANAC46                        --------->RAP2.3(1)                        <------NtERF2                  ---------->DOF2                        --------->ATERF1(1)           ----------->HVH21                       <---------ATERF1(1)          <---------ANAC46                       <---------ERF1            ------->GAMYB      ----------->HVH21<---------RAP2.3(1)       --------->ANAC58   --------->TOE2(2)   <---------ORA47(2)        --------->ANAC58   --------->TOE1(2)   <---------DEAR4(2)        --------->ANAC46  <---------ANAC58     ------>NtERF2           --------->MYB52(1)  <---------ANAC58    <---------RAP2.3(2)     ------->GAMYB  ----------->RAV1(2) <---------RAP2.6(2)    <---------MYB55(2) -------->P           <---------DEAR3(1)     <---------MYB52(2) <----------DOF2   --------->MYB52(1) ----->HSFC1(2)       <---------RAP2.3(3)    --------->MYB46(3) <---------DAG2   *TSS ----->At4g35610     --------->ATERF1(1)  <----------ID1       <-----------------AGL2 ------HSFC1(2) ----------->HVH21   <------ZmHOX2a(1)--------->LBD16         <----------ID1   gcttacctgcgactgcgagtgaaggcggcgaagagcgaggaagaacaacaaacgccgtgaagctagcttttttgggtttgggccaaacgagattagtttc  17576500                                                     <------MYB83                                                --------->ATHB12                         <---------MYB52(1)     --------->ATHB51                   --------->LBD16              <---------AHL20(2)                   ----------->HVH21            --------->AHL20(2)                 <---------LBD16                <---------ICU4                <-----------------AGL1         --------->ICU4               <---------ARR14(2)          <----------DOF2                                          -               --------->ARR14(2)        --------->LBD16                                  --------->DEAR3(2)             --------->LBD16             --------->At4g35610                             ------->TEIL             ----------->HVH21        <------ZmHOX2a(2)                                  --------->MYB52(1)            <---------HSFB2a(2)      <---------ARR14(2)                                 --------->MYB52(1)            --------->HSFB2a(2)      --------->ARR14(2)                               <---------MYB52(2)           ----------------->AGL1--------->ANAC46    <------MYB46(1)          --------->LBD16       -           <---------LBD16      --------->TOE1(2)   --------->MYB59          --------->LBD16       --         <-----------GT1----------->GT1------>ZmHOX2a(2)                    <---------LBD16 ---------   taacagatgtttttccggacccggaccggtaatacccacgatccgcttaattatttggtccctgtctagctctaaaatcccggtgcaaacgaaccggcaa  17576600                --------->MYB59               <XXXXXXXXXXXXXXXXXXXXMIR3933              <---------ARR14(2)              <---------MYB52(1)             <---------SPL7            <---------MYB46(3)         --------->MYB52(1)         ------>MYB83    ------->GAMYB   <---------MYB55(2)   --------->MYB46(3)  ------>MYB83--------->ARR14(2)  ------>MYB46(1)                                                               xxxxxxxxxxxxxxxxxxxxx --------->MYB52(1)                                                    <----------DOF2 -------->TOE1(2) <---------MYB52(1)                                 ---------->ID1                -- -------->TOE2(2)<------MYB83           ------->TEIL       <----------DOF2 --------->YAB1        ---- ------->MYB46(3)<------MYB46(1) <---------GLK1(1)   ---------->ID1 <-----------GT1 --------->ANAC58 >LBD16  ------>MYB46(1)         --------->GLK1(1)  <------------------------ANAC81 --------->ANAC58   aaccaacgacctagcggttcggtattttgtttctgaaatctgaaccctccgatttgttcttctttttttttttctttttataatgcaaacaattgatgaa  17576700                                                                                                 <---                                                                                        <---------HSFB2a(2)                                                                                   <---------ANAC58     <---------AHL20(2)                                                            <---------ANAC46  --------->AHL20(2)                                                            <---------MYB52(1)<--  --------->AHL20(1)                                                            <---------SPL7   ----  <---------AHL20(1)                                              --------->ZAT14  <---------ANAC55(2)  <---------AHL20(2)                                              <---------ZAT18 --------->SPL7 ----  <---------ARR11(3)                                          --------------->AtSPL3--------->TOE1(2)  --------->ARR11(3)                                   <-----------GT1        --------->ANAC55(2)<--- --------->AHL20(2)                               ----------->GT1 <---------ZAT14 <-------TEIL   <--- xx>smallRNA(i2)        --------->TOE2(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------ANAC58 ------->AHL20(2) ----------->GT1             --------->DAG2 --------->ZAT14  <---------ANAC55(2)---- ----->AHL20(2)   --------->YAB1             ---------->DOF2 <---------ZAT14 <---------At5g28300-----   aaaatatattatggtccgaatggtaacctcggtttttaatatgtgagaaaagtggtataacattgcagtacagttcaattacggtacgtgcgagaaaaat  17576800                                                                             <---------ANAC46                                                                           <---------ANAC46                                                                           --------->ALFIN1            <---------ARR14(2)                                            <---------SPL7     --------->LBD16                                                     <---------ANAC58    <---------ANAC58                                                     <---------ANAC58          --    <---------ANAC46                                              --------->AHL20(2)             ----    <---------ANAC58                           --------->ATHB12   --------->ATHB51             <-----   <---------LBD16                            <---------YAB1      <---------AHL20(2)           ------ ------AHL20(2)                      <-------TEIL                 --------->ATHB12       --------->AHL20(2) -------AHL20(2)                     --------->ZAT14 <---------WOX13(1) <---------DEAR3(1)   -------- ----->AHL20(1)                  <---------------AtSPL8       --------->AHL20(2)     --------->AHL20(2) ----->AHL20(2)              ---------->DOF2  --------->ICU4  <---------AHL20(2)     <---------AHL20(2) ------AHL20(1)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------AHL20(2) <---------YAB1 <- ------ARR11(3)    --------------->AtSPL8    <---------TOE2(3)--------->ICU4<---------LBD16  <------- ----->ARR11(3)    <---------------AtSPL8   --------->YAB1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <--- ---->AHL20(2)    <---------ANAC46 <---------SPL7  --------->ATHB12    <---------LBD16   <---------AHL20(2)   atatttgcgggacaaatatggtttgtacaaaataagcggtacagaataatgtttgattgatgaaaaaattatttgcggtgcggattataaattatatata  17576900                   <---------AHL20(2)                   <--------HAHB4                   -------->HAHB4                   -------->ATHB1                   <---------ICU4                  <---------YAB1            -------->HAHB4            <--------ATHB1            <--------HAHB4            <---------ICU4            --------->YAB1            --------->ATHB51           --------->ICU4           --------->AHL20(2)         --------->YAB1 <---------YAB1       <---------AHL20(2)       --------->AHL20(2)    --------->AHL20(1) <---------AHL20(1)    <---------AHL20(1) <---------AHL20(2)   <---------AHL20(2)<---------YAB1                              <---------ICU4 --------->AHL20(2)--------->YAB1                                -------->ATHB1 <---------AHL20(2)--------->ATHB51                             --------->ICU4 ------->AHL20(2) --------->ICU4                                <---------AHL20(2)         <--------- ----->AHL20(2)--------->AHL20(2)         --------->ANAC58      <---------ATHB51--------->AHL20(2) ----AHL20(2)  <---------AHL20(2)         --------->ANAC58      --------->AHL20(2)  --------->YAB1 --->AHL20(2)  --------->AHL20(1)         --------->ANAC46   --------->AHL20(2) <---------AHL20(2) ->AHL20(2)<---------YAB1            --------->AHL20(2)      <---------AHL20(2)--------->AHL20(2) --------AHL20(2) <---------ATHB51   <---------AHL20(2)   --------->YAB1       <---------AHL20(2) --AHL20(2)<---------ATHB51   <---------ZAT6    --------->AHL20(2) <---------YAB1--------->WOX13(1) - ------AHL20(2)<---------AHL20(1)   --------->AHL20(2)<---------AHL20(2) <---------ANAC55(2)<-------TEIL   tatatatatattaataattaattattatttttgtgttaataaataagcaataacatatatttataaattattaatacataaataaatcaaaatatacatt  17577000  Previous    Next  AGI:  At3g47630.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO41928.1); contains InterPro domain Mitochondrial matrix Mmp37 (InterPro:IPR015222) Range:  from: 17574031    to: 17576481    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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