Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->DAG2                    ---------->DOF2                 --------->YAB1                 --------->TOE1(3)                                                              -----        <xxxxxxxxxxxxxxxxsmallRNA(s)                                                       <---------     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                              --------->ARR11(3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                               <---------ARR11(3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                             --------->AHL20(2) -----ALFIN1     --------->TOE2(3)                                                 <---------ARR11(3) ----ZAT14    <---------ARR14(2)                      ----------->GT1            --------->ANAC58 --->ZAT14 --------->ANAC46               --------->AHL20(2) ----------->GT1     --------->ANAC46 --GT1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        ---------->DOF2              --------->ANAC58<---   actcggacactctgcgtaaccataaagctaaataagtttttgaatcaaataacttaaagtaaaatgtcaaaaccttgcacttcaagaaattatcttttgt  17559700     --------->ANAC46   --------->REM1(1) ----->ID1                                                    <---------YAB1 -DOF2 ------->GAMYB --------->YAB1                         <-----------GT1                  <------- ------ANAC46  ------->TEIL                             <---------ARR11(3)          --------->ARR11(3)   cgtctacaactcacatgtatgtataatatcgaatcgattcgaaccatagcacatcaacgatattactataaacttctaagttagaagctctagttgtgta  17559800                                                                --------->YAB1                                                                -------->HAHB4                                                  --------->ATHB12<---------YAB1                                               --------->TOE2(3)<---------ICU4                                  <---------YAB1 <---------YAB1 --------->ATHB12                                <---------At4g35610            <---------YAB1                                --------->At4g35610       <----------DOF2                         <---------YAB1        --------->YAB1  --------->ICU4          --------->AHL20(2)        <---------AHL20(2)  ------->TEIL   <------ZmHOX2a(1)--------->ICU4             <---------AHL20(2) --ANAC46      ----------->GT1--------->YAB1  ----------->GT1--------->YAB1     --------->YAB1    <--   tatcaaatattaaaaatgtgtgaaaatatgaatcatctgattgtaggaatgttaattgggctataatgattaatgaggtctaaaatgatataaatgttta  17559900                                                            --------->TOE2(3)               <---------WRKY12                            ----------->GT1              <<<<<<<<<<WRKY6                              --------->ANAC46              <<<<<<<<<<WRKY11                           <---------DOF5.7(2)            <------MYB46(1)                             <---------WRKY12            <------MYB83                           <---------LBD16           --------->MYB59      ----------------->AGL1--------->At5g28300  ----------->GT1               ----------------->AG --------->LBD16              --------->LBD16  <---------ANAC55(2)       <---------ANAC58    --------->ARR14(2)              <---------LBD16  --------->ANAC55(2)       <---------ANAC58    <---------ARR14(2)           <---------GLK1(1) ---------HVH21<---------WRKY38(1)             <------ZmHOX2a(1)     ---------->DOF2           ------   tgtcaagtgatattaggtcaactaatttaggcgttccaaattagtaagaggaacccggtaaacgtaaaattgaaagaagaaacccgggtttaacatgtat  17560000                                                                                                <----                                                                                                -----                                                     --------->ATERF1(1)                        <----                                                     <------NtERF2                     <---------WOX13(1)                             --------->MYB59        <---------ATERF1(1)               <------------CBF                   <---------ANAC58          <------------CBF    <---------ICU4      --------->ATHB12                   <---------ANAC58     ------------>CBF        --------->AHL20(2)  <---------YAB1--- ->TEIL        ---------->DOF2         <-----------GT1      <---------ATHB12    <---------YAB1 <-----   ttgggtttaagttcaaatatagcgagacatttaggcccgtttcacaatattgggccgagcccatgaataaatacaaaatagtatttttgattggagagga  17560100                                                                           <---------PCF2                                                                          ----------->HVH21                                                                        --------->ALFIN1                                                                       <------NtERF2                                              --------->ARR14(2)       <-------GAMYB                                      <---------ANAC46                <---------DEAR4(2)       <---------ANAC58              <------NtERF2                    <---------DEAR3(2)       <---------ANAC58              --------->ATERF1(1)              --------->MYB55(2)      *TSS ---------->ID1           ------>NtERF2                     <---------MYB46(3)    <----------DOF2                <---------DEAR3(1)                <---------DREB2C(2) -------ARR10                   --------->DAG2<---------ARR14(2)     --------->ALFIN1               - ---->ARR14(2)                 ---------->DOF2--------->GLK1(2)      <---------DEAR3(1)          <--- -----ARR14(2)                ---------->DOF2<---------GLK1(2)      <---------ABI4(1)           <---- --->ZmHOX2a(2) <---------DEAR3(2) ----------->HVH21              <---------DEAR3(1)     <------ZmHOX2a(1) -ZmHOX2a(1)  <------NtERF2   --------->MYB52(1)                 --------->SPL7  <---------MYB46(3) -   tcggccctttcttgtcgtcgtttcgaagagactaaaggcgacggagagaatcggagaagaagatgggaacggcggtgggacagtggctagaggaagcgct  17560200              --------->ANAC58              --------->ANAC58           --------->LBD16          --------->RAP2.6(2)                        <---------LBD16          --------->RAP2.3(2)                     <---------At4g35610        --------->At4g35610                       --------->At4g35610             ---------->CDC5        ------>NtERF2                         <-----------HVH21             ------>ZmHOX2a(2)     --------->At4g35610                     <---------bZIP60(1)           <------ZmHOX2a(2)     <---------At4g35610                     --------->bZIP60(1)          --------->ARR11(3) <---------WRKY18(1)                         --------->TGA2(1)     ------>ZmHOX2a(1)      <---------ETT(2) -------->WRKY12                             <---------TGA2(1)     ===============HOX2a_HOX2a     --- ------MYB46(3)                         ==================================HOX2a_HOX2a   <-----------HVH21 ------DOF2------>NtERF2                ------>ZmHOX2a(2)          ================HOX2a_HOX2a    --- -------->WRKY38(1) ----------->HVH21   --------->YAB1 --------->LBD16    <---------ARR11(3)  ------>NtERF2   tgttgacctctgccgcaaaccagagaccggtttgaatttcgatcgtgatgtcatctccggtttagtctcctattgcgatcttgctcagcctgtcgatgcc  17560300           --------->ANAC46                                       --------->ARR14(2)    <---------ARR11(3)                                        <---------LBD16    <---------ARR14(2)                                  <---------ZAT6    <-----------ARR10                               <---------ANAC58                               <-    --------->ARR11(3)     <----------DOF2          <---------ANAC58     --------->ATHB12        <--- ------>ANAC58      ------>ZmHOX2a(1)        --------->ANAC55(2)  <---------GLK1(2)         <-------- ------>ANAC58 --------->GLK1(1)   <------NtERF2  <---------YAB1  <---------ARR14(2)       --------->AHL20(2)   aaggaatatctcgacgtaaatccttccctctttagtcgccaattctcacttaatgcttgtgttattcggattcgatgatttagttttttcatataaaatt  17560400                                                 --------->ATHB12 --------->MYB52(2)                    <------MYB46(1)                            <---------At4g35610 -------P                              <------MYB83                    <---------ANAC46 ------MYB46(3)                       --------->MYB59                  ----------->GT1       -------- -AHL20(2)                          <---------MYB52(1)                --------->MYB59       ---------   ggttagtgattttgggcaattggataagagattagtgtgttaggtttgaattgatttcaattgagtagtagtgaggtagaattaagctctctgaaccatt  17560500                                                --------->ANAC58                                                --------->ANAC58      <-----------------AG                 <---------------AtSPL8                             -------    <---------ZAT6                         --------------->AtSPL3                             <------ ->ATHB12                                  <---------------AtSPL3                           ------->TEIL >MYB46(3)    ----------->GT1      --------->CCA1(2)                              <-----------GT1   gaagaagtgatagttttggtaatttagttttaatgagatagggttttagtacgaaatcagagatgaatagttgtctccattgtttaacttgatgaaccta  17560600  Previous    Next  AGI:  At3g47610.1    Description:  transcription regulator/ zinc ion binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO62544.1); contains InterPro domain Zinc finger, C2HC5-type; (InterPro:IPR009349) Range:  from: 17560106    to: 17562405    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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