Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------AHL20(2)                                                                                        --------->AHL20(2)                                                                                        <---------AHL20(2)                                                                                        <-----------TBP                                                                                      <-----------TBP                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                    <-----------TBP                   <---------ANAC58                                                 <---------AHL20(2)                  <-------TEIL<---------ARR11(3)                                    --------->AHL20(2)               <---------ANAC58                    <---------ARR11(3)             <---------AHL20(2)               <---------ANAC46        <---------PCF2                             --------->AHL20(2)            --------->DAG2    --------->ARR11(3)   --------->ARR11(3)             <-----------TBP        --------->YAB1       --------->YAB1  <---------ALFIN1--------->YAB1      xxxxxxxxxxxxxxxxxx>smallRNA(si3)   ------>ZmHOX2a(1)<-------GAMYB    *TSS    ------->GAMYB <---------WOX13(1)   <-----------TBP  --------->TOE2(3)<---------ANAC58 --------->ALFIN1      <------------CBF    --------->AHL20(2) -----------------AGL1    ---------->DOF2   --------->MYB46(3)  --------->YAB1<---------AHL20(2) -------GLK1(1)<---------ANAC58   <-----------RAV1(1)------>ZmHOX2a(2)      <-----------TBP   <------   gtctccttaatggtaaggcgtgcgttgagaaagataatgtgggacaaccacatgatctctcattgatcatattttggaatttatatatatatatatatga  17538100                                                                                   ------>MYB83                                                                                   ------>MYB46(1)                               <-----------GT1                                     -------->P                           <---------YAB1                                        --------->TOE1(2)                          <---------AHL20(1)                                     --------->TOE2(2)                         <---------ICU4                                          <---------MYB59                      --------->YAB1                                             <---------MYB111(1)                     <---------ATHB12                                       --------->YAB1                <-----------HVH21<-----------GT1                           <---------ATHB12     <---------AHL20(2) <---------YAB1                                    ------>MYB46(1)     --------->AHL20(2) --------->ICU4                                    ------>MYB83    --------->AHL20(2)<---------ICU4  <----------DOF2                    --------->WOX13(1) ---YAB1     <----------DOF2 <---------AHL20(2) <---------ZAT6       <-----------GT1   tttctatttaattttctttgtcactcattattttttctctcttttttctagtgtttaaaaaaacttagtttttaccaatcaaacctaccatctagtaaat  17538200             <<<<<<<<<<WRKY38                --------->ANAC55(2)             <<<<<<<<<<WRKY26                <---------ANAC55(2)             <<<<<<<<<<WRKY43                <---------ANAC55(1)           ----------->GT1            ----------->RAV1(2)       --------->ATHB51          ----------->HVH21       <---------ICU4            ------>ZmHOX2a(1)                                              <----       --------->ATHB12        --------->At4g35610        <---------AHL20(2)                    <----       <--------ATHB1  --------->REM1(1) <-----------HVH21--------->AHL20(2)          --------->DAG2      <---------ATHB51 --------->ANAC46 ------>ZmHOX2a(1) --------->AHL20(1)         ---------->DOF2      <---------AHL20(2)       ----------->RAV1(2)   <---------YAB1        --------->MYB52(2)   -----   gtaaatgaataattggtcaatttctacatcatctcctgactcctgttacatgtttataaataaaatagttcatttgctagttgctacaaaagtgccaaaa  17538300             --------->DEAR3(1)                <-------TEIL<----------DOF2             <---------ALFIN1                <---------ARR14(2)            --------->ATERF1(1)              --------->ARR14(2)          ----------------->AGL1            --------->MYB46(3)               --------->ARR11(1)        ---------->ID1       ------>ZmHOX2a(1)                     <---------GLK1(2)      --------------->AtSPL8  ------>ZmHOX2a(2) -----ARR11(3)     <----------DOF2       ---------->DOF2--------->ARR11(3)                 <------ZmHOX2a(2) -----AHL20(1) <------NtERF2            --------->ICU4  <---------ARR11(3) <----------DOF2<---------ARR14(2) ---->AHL20(1)------>NtERF2      ---------->DOF2----------->GT1---------->ID1             --------->ARR14(2)   tatttcatcctgtagccaccgcttgatgtctgaagaaaagtcataaagattcgtaaaatgtctttgtttttttgttcctttttagataatgggatcccat  17538400                                                                                            *TSS                                                                                         --------->ANAC58       <----------DOF2                                                                   --------->ANAC58  ------->MYC3                                                                        --------->ZAT14  <-------MYC3                                      --------->ARR11(3)                <---------ZAT14 <---------ANAC58                       --------->ALFIN1       <---------AHL20(2) --------->ZAT6<---- <---------ANAC55(2)                 --------->DAG2 <-----------GT1              <---------YAB1<----- <---------ANAC58                   ---------->DOF2 <---------ARR11(3)         <---------ICU4  ------   aaaacgtgtctttgttgacgacttgacttaaattttcgaaaagtggcagtttaatatccctattttttatttcaagttgcattatcactacaggcatttt  17538500                                                                     ------->GAMYB         <---------ANAC58                        --------->ANAC58   --------->MYB46(3)         <---------ANAC58                        --------->ANAC58   <---------MYB55(2)   --------->ANAC58 -----AHL20(2)                     --------->AtLEC2               <-----------GT1        --------->ANAC58 ----AHL20(2)                      ------>ZmHOX2a(1)    ---------->DOF2                ---------->DOF2 --->AHL20(2)             <-------TEIL     --------->TOE1(2) <----------DOF2  ---------->ID1   aatttgcaattgcttcgcctcttatatgttcattttcctgcaaaacatgagaagcatcaaaagctttttaaccaccatttgtttttttggaaagcatgag  17538600                                                                               <---------ANAC58               <----------DOF2                                                 <---------ANAC58              <---------ANAC58                                             <----------DOF2              <---------ANAC58                      <---------At5g28300 --------->ANAC58          <---------ANAC58                         <-----------GT1  --------->ANAC58          <---------ANAC58                  <-------MYC3            --------->ANAC58     <----------DOF2                        ------->MYC3    ------->TEIL--------->ANAC58           --   actgtttcttttacttgctttcaatgctctcatgctacttgaaacacatggttttaccgatgaaactgataggcaagctttgcttcagttcaagtctcaa  17538700                                                                              --------->RAP2.6(2)                                                                              ----------->GT1                                                                          --------->ALFIN1                                                                         <-------MYC3                                                                         ------->MYC3                                                                        <-----------RAV1(1)                                   --------->MYB46(3)                 <---------ANAC55(1)                        ---------->ID1                            <-------GAMYB--------->At5g28300                    <---------ANAC58    <---------ICU4           <---------ANAC58          ---------->DOF2  ------>ZmHOX2a(1)  <---------ALFIN1   <---------ANAC58           --------- ------->GLK1(2)    <---------ANAC58   <---------ATHB12          ----------->GT1        ---------->DOF2   gtttctgaagacaaaagagttgtcttgtcctcatggaaccactcattcccactctgcaattggaagggcgttacatgtggccgtaaaaacaaaagagtta  17538800               <---------HSFB2a(1)            --------->ATHB12               --------->HSFB2a(1)     <-----------GT1                          ------>ZmHOX2a(2)         <---------LBD16            <---------TGA2(1)                         <---------ARR11(3)   <---------HSFB2a(2)              --------->TGA2(1)                     <---------ANAC55(2)       -   --------->HSFB2a(2)              --------->bZIP60(1)                   --------->ANAC55(2)       - <---------At4g35610                <---------bZIP60(1)              <---------CCA1(2)           <--- --------->At4g35610             <---------ZAT6   --------->YAB1 <---------ANAC46           <-------- ----------->RAV1(2)          <------NtERF2 ------>MYB83         <---------ANAC58           <-------- -->GT1<---------GLK1(1)   <---------LBD16  ------>MYB46(1)      <---------ANAC58     --------->YAB1<   ctcatctggaactcggaagattgcaactaggcggagtgatatcaccatccattggtaatctatcgtttcttgtatcacttgatctctatgaaaacttttt  17538900                           <-------GAMYB                          <---------YAB1                           <---------At4g35610                   --------->ARR11(3) -------------->AtSPL8     --------->At4g35610                   <---------ARR11(3) -------------->AtSPL3 ------------>AtMYB77                 --------->AHL20(2)          <------MYB83 ------AtMYB61         <---------PCF2              --------->CCA1(2)                   --------->MYB59 -DAG2              --------->ALFIN1               <---------GLK1(1)                 <---------MYB52(1) --DOF2     ------>ZmHOX2a(1)                     --------->ARR14(2)      <---------PCF5<------MYB46(1) ---------------AtSPL8----------->HVH21           <---------ARR14(2)     ----------->HVH21   tggtggtactattcctcaagaggtgggacagttgtctagactcgaatacttggatatgggcataaattatcttaggggaccgattccattaggtctatac  17539000  Previous    Next  AGI:  At3g47560.1    Description:  esterase/lipase/thioesterase family protein. similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G29840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65342.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65343.1); contains InterPro domain Protein of unknown function DUF1749 (InterPro:IPR013744) Range:  from: 17536470    to: 17538037    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g47570.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47090.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47580.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23125.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83822.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48528.1); contains InterPro domain Serine/threonine prote Range:  from: 17538492    to: 17541914    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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