Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->YAB1                                                                <-------TEIL                                                       --------->HSFB2a(2)                                                       <---------HSFB2a(2)                                          --------->ATHB51  <-------TEIL                        ----- ----->ANAC58                          --------->YAB1 <---------LBD16                           ----- ----->ANAC58                 ----------->RAV1(1)   <---------ARR14(2)                          ----- ---->DOF2                 ------->GAMYB  <---------ICU4  --------->ARR14(2)                 <<<<<<<< >ANAC58                  --------->MYB46(3)        --------->ARR14(2)              ---------->DOF2 >ANAC58                ----------->RAV1(1)         --------->ARR11(3)   ---------->DOF2     <<<<<<<<   agcactaatcccttctctctctatagcaacagccacatttttcataatttcgaagttctggatacattcataggccaaagacaaaacaaagttaatgcat  17537600                --------->At4g35610          --------->MYB46(3)         ------>MYB46(1)         ------>MYB83                                    --------->ZAT18      XXXXXXXXXXXXXXXXXXXXX>MIR856              <----------DOF2                                 ----- <---------ATHB12                               <---------DAG2        --------->KAN4(2)         <---- ---->AtLEC2   <---------ARR11(3)            <---------ALFIN1    --------->AHL20(2)            <----- ---->ANAC58 ------>MYB46(1)                <---------ZAT14      <---------AHL20(2)      --------->At4g35610 ---->ANAC58 ------>MYB83           --------->ICU4     --------------->AtSPL8   --------->MYB52(1) <<FUS3  -------->P     ------->GAMYB   <------ZmHOX2a(1)<---------ZAT18     --------->ANAC46  <----- <<ABI3 ------>ZmHOX2a(1)       <-----------HVH21   <----------DOF2  <---------ICU4   ---------->DOF2   gcaataactcctaccaacatctgcaaccctactatgtcatgaggactccactttctttgtgtacaaaataaatattcccaaacaacgaagaagcagagct  17537700                <---------ICU4                --------->YAB1               <---------YAB1              --------->AHL20(2)  <---------ZAT18             --------->YAB1       --------->ZAT14            <---------YAB1    --------->DAG2                     --------->ARR11(3)           --------->TOE2(3) ---------->DOF2                     <---------ARR11(3) ---------->AGL15        --------->YAB1                        ----------->ARR10 -----------AGL15    <---------YAB1                  <---------ARR11(3)                            -- ------------AGL3  <---------ICU4 --------->ZAT18    --------->ARR11(3)                    --------->ANAC58 ------------AGL2  --------->YAB1 <---------ZAT14   <---------CCA1(2)     ----------->GT1  --------->ANAC58   actaatgggaaaacattataatcactataaaaaaagtgaactaaaattatgcacaaatctttggtaagatgttggattgagaaatggacattcaagtaag  17537800                                                                                                    <                                                                                             <-------                                                                                             ========                                                                                           ------>MYB83                                                                                           -------->P                                                                                           ------>MYB46(1)                                                                                          <---------ALFIN1                                                                                         --------->MYB46(3)                                                                                       <---------ARR14(2)                        --------->TOE2(3)  --------->bZIP60(2)                         --------->ARR14(2)           <---------ARR14(2)              ----------->HVH21                           --------->PCF2           --------->ARR14(2)         --------->ANAC58                             <---------At4g35610     --------->DAG2   -------->P    ---------->DOF2                                --------->At4g35610    ---------->DOF2<---------MYB52(2) --------->ANAC58                          ---------->DOF2 <---- --------->GT1   <-----------ARR10------>ZmHOX2a(2)                         <-------TEIL <---------MYB55(2)   tgagaaaaaagcagaaccgaaactaaccttgtttgatcgaaagccatgacacaagactacaatttctgtagaaccagtttcatgaagcagacccaccagg  17537900                                           <---------ANAC58                                           <---------ANAC58                                      ------->TEIL                                    <---------ZAT18                                    --------->ZAT14                                    <---------ZAT14                                    --------->ZAT18                                         >>>>>>>>>SARD1                                   <---------ANAC46                                     <------ZmHOX2a(1)          <---------MYB46(3)       <---------ANAC58                                    --------->ANAC58      <---------RAP2.6(2)          <---------ANAC58                             <-----------RAV1(1)    <-----------RAV1(1)          <---------ANAC46                               <---------MYB46(3) ---------YAB1                  <---------MYB52(1)                        <----------DOF2   >>>>>>>>>CBP60g ----RAV1(2)                   <-------GAMYB                           <-----------GT1 --------->ANAC58 ===============RAV           <-----------RAV1(1)    ------->TEIL <---------DAG2--------->MYB52(2)  < -----GLK1(2)       --------->YAB1--------------->AtSPL8          <----------DOF2<-------GAMYB    <--   ttctcattgtggctgttcagaatcacaatcttctgttgtgtacttccctgcgatgaatccattctcaacttttttactttgtttgttgcaggaaatttgg  17538000                                                                                          <---------AHL20(2)                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(2)                                                                                        <-----------TBP                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                      <-----------TBP                                                                                    <---------AHL20(2)                   <---------ANAC58                                                 --------->AHL20(2)                  <-------TEIL<---------ARR11(3)                                    <-----------TBP               <---------ANAC58                    <---------ARR11(3)             <---------AHL20(2)               <---------ANAC58        <---------PCF2                             --------->AHL20(2)            --------->DAG2    --------->ARR11(3)   --------->ARR11(3)             <-----------TBP        --------->YAB1       --------->YAB1  ------->GAMYB <---------WOX13(1)    xxxxxxxxxxxxxxxxxx>smallRNA(si3)   ------>ZmHOX2a(1)<-------GAMYB    *TSS    <---------ALFIN1--------->YAB1     <-----------TBP  --------->TOE2(3)<---------ANAC58 --------->ALFIN1      <------------CBF    <---------AHL20(2) -----------------AGL1    ---------->DOF2   --------->MYB46(3)  --------->YAB1--------->AHL20(2) -------GLK1(1)<---------ANAC46   <-----------RAV1(1)------>ZmHOX2a(2)      <-----------TBP   <------   gtctccttaatggtaaggcgtgcgttgagaaagataatgtgggacaaccacatgatctctcattgatcatattttggaatttatatatatatatatatga  17538100                                                                                   ------>MYB46(1)                                                                                   -------->P                               <-----------GT1                                     ------>MYB83                           <---------YAB1                                        <---------MYB59                          <---------AHL20(1)                                     <---------MYB111(1)                         <---------ICU4                                          --------->TOE1(2)                      --------->YAB1                                             --------->TOE2(2)                     <---------ATHB12                                       --------->YAB1                <-----------HVH21<-----------GT1                           <---------ATHB12     <---------AHL20(2) --------->ICU4                                    ------>MYB46(1)     --------->AHL20(2) <---------YAB1                                    ------>MYB83    --------->AHL20(2)<---------ICU4  <----------DOF2                    --------->WOX13(1) ---YAB1     <----------DOF2 <---------AHL20(2) <---------ZAT6       <-----------GT1   tttctatttaattttctttgtcactcattattttttctctcttttttctagtgtttaaaaaaacttagtttttaccaatcaaacctaccatctagtaaat  17538200             <<<<<<<<<<WRKY43                <---------ANAC55(2)             <<<<<<<<<<WRKY38                <---------ANAC55(1)             <<<<<<<<<<WRKY26                --------->ANAC55(2)           ----------->GT1            ----------->RAV1(2)       <--------ATHB1            ------>ZmHOX2a(1)       --------->ATHB51          ----------->HVH21                                              -----       --------->ATHB12        --------->At4g35610        <---------AHL20(2)                    <----       <---------ICU4  --------->ANAC46  <-----------HVH21--------->AHL20(1)          --------->DAG2      <---------ATHB51 --------->REM1(1)------>ZmHOX2a(1) --------->AHL20(2)         ---------->DOF2      <---------AHL20(2)       ----------->RAV1(2)   <---------YAB1        --------->MYB52(2)   <----   gtaaatgaataattggtcaatttctacatcatctcctgactcctgttacatgtttataaataaaatagttcatttgctagttgctacaaaagtgccaaaa  17538300             --------->DEAR3(1)                <-------TEIL<----------DOF2             <---------ALFIN1                <---------GLK1(2)            --------->MYB46(3)               --------->ARR14(2)          ----------------->AGL1            --------->ATERF1(1)              <---------ARR14(2)        ---------->ID1       ------>ZmHOX2a(1)                     --------->ARR11(1)     --------------->AtSPL8  ------>ZmHOX2a(2) ---->AHL20(1)     <----------DOF2       ---------->DOF2--------->ARR11(3)                 <------ZmHOX2a(2) -----ARR11(3) <------NtERF2            --------->ICU4  <---------ARR11(3) <----------DOF2<---------ARR14(2) -----AHL20(1)------>NtERF2      ---------->DOF2----------->GT1---------->ID1             --------->ARR14(2)   tatttcatcctgtagccaccgcttgatgtctgaagaaaagtcataaagattcgtaaaatgtctttgtttttttgttcctttttagataatgggatcccat  17538400                                                                                            *TSS                                                                                         --------->ANAC58       <----------DOF2                                                                   --------->ANAC58  <-------MYC3                                                                        <---------ZAT14  ------->MYC3                                      <-----------GT1                   --------->ZAT14 <---------ANAC58                       --------->ALFIN1       <---------AHL20(2) --------->ZAT6<---- <---------ANAC55(2)                 --------->DAG2 <---------ARR11(3)           <---------YAB1<----- <---------ANAC58                   ---------->DOF2 --------->ARR11(3)         <---------ICU4  ------   aaaacgtgtctttgttgacgacttgacttaaattttcgaaaagtggcagtttaatatccctattttttatttcaagttgcattatcactacaggcatttt  17538500  Previous    Next  AGI:  At3g47560.1    Description:  esterase/lipase/thioesterase family protein. similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G29840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65342.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65343.1); contains InterPro domain Protein of unknown function DUF1749 (InterPro:IPR013744) Range:  from: 17536470    to: 17538037    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g47570.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47090.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47580.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23125.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83822.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48528.1); contains InterPro domain Serine/threonine prote Range:  from: 17538492    to: 17541914    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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