Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->TOE2(3)      <---------At4g35610                              --------->YAB1-------->ATHB1             --------->HSFB2a(1)            <---------ICU4             <---------HSFB2a(1)            --------->YAB1             --------->HSFC1(2)            <---------ATHB51             <---------HSFC1(2)            --------->ICU4                        --------->MYB46(3)       ---------->DOF2      <---------ARR11(3)       --------->At4g35610<---------ICU4 <---------ATHB12           --------->ARR11(3)<---------YAB1            --------->YAB1 --------->ICU4     <----------DOF2        <---------YAB1              <---------ATHB12        ------   gcaatgaataaaagaagtttctctttatgaaatcttaatcaaacaattattcttcatcagaagttcagaaccaataatctctaacaactaaatgaactag  17516600         --------->YAB1         ----------->GT1   --------->TOE2(3)                                                     <------ZmHOX2a(2)   --------->YAB1                                                       <---------ARR14(2) --------->AHL20(1)                            --------->ANAC55(2)      --------->AGP1 --------->ARR11(3)                      <---------ANAC58               --------->ARR11(3) <---------AHL20(1)                      <---------ANAC58               --------->ARR14(2) <---------ARR11(3)                 <---------ICU4          --------->ZAT6             --------->MYB52(1) ----->GT1    --------->ZAT6       <---------YAB1 ------->TEIL          <---------ARR11(3)   taatatcttaatggtaacacaagactggaactatgttataatttcgttcatgtaactcaataacacaaattgtagatccaaaacagacaaaacagagact  17516700                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                        <---------DAG2                                                                                     <-----------GT1                                                    <---------YAB1                <---------ICU4   --                                                  --------->AHL20(2)             --------->ICU4   <--                                                  <---------AHL20(2)        --------->ANAC46    -----              ----------->GT1               --------->YAB1                  --------->ANAC58  <------     <-----------GT1    <---------------AtSPL8 <---------ICU4           <-----------GT1 <----------DOF2  ----------->GT1<---------AHL20(2)        <---------ATHB12<------ZmHOX2a(1)--------->ANAC58<--------   gaagaagtaactagttaagttaattactagtacaaaactaatctaatcatatttatttttaggacaattccaattttcaggccaaaattactttttatca  17516800                                ------>NtERF2                                --------->At4g35610                                <---------At4g35610                               <---------ATERF1(1)                               <---------ALFIN1                               --------->DEAR3(1)                              --------->RAP2.3(1)                   ------->GAMYB                ----                             ------>NtERF2                         <------------AtMYB77         ----- ------->YAB1                <---------ATERF1(1)                 --------->ARR14(2)        --------->DAG2 ------------->AtSPL3        --------->LBD16                     <---------ARR14(2)       ---------->DOF2 --------ICU4               --------->ANAC46               <---------ALFIN1           --------->ANAC58 ------------->AtSPL8       --------->DEAR3(1)            --------->MYB46(3)        --------->MYB52(1) -------ATHB12             <---------LBD16               ------>ZmHOX2a(1)         --------->DEAR3(1) ---->WOX13(1)          --------->At4g35610             --------->ANAC46          --------->DEAR3(2) ---YAB1                <---------At4g35610       <-----------TGA1 --------->MYB46(3) --------->ANAC58 ---GT1             <-----------HVH21     <---------At4g35610  --------->At5g28300--------->MYB46(3)   atcagtaccttctctggtgatttgtcatctccgccgctccagtcatcttcttcgtcatcctccaccgtaactgccgattcaaaaaccgacggaaaaggga  17516900                           ------>ZmHOX2a(2)                          --------->GLK1(1)                          <---------GLK1(1)                         <---------AGP1                         <---------ARR11(3)                         --------->ARR14(2)             --------->TOE2(3)             --------->TOE1(3)          --------->YAB1          --------->DAG2 --------->ARR11(3)    <---------AHL20(2)         ---------->DOF2 <---------ARR14(2)<---------ICU4 ----->GLK1(1)          <---------CCA1(2) <---------YAB1 ---->ARR14(2)      --------->At4g35610 <---------ICU4             <<<<<<<<<TBF1           <---------AHL20(2)   ttttcataccgaaaagcttaatagctggatctctagtctccatcatcatttttttggagcctctgtttcttcttctctctatgtctctgtgatttttttt  17517000                                                                                           --------->At4g35610                                                                                           <---------At4g35610                                                                                        --------->TGA2(2)                                                                                       <-----------HVH21                                                                                       <-----------TGA1                                                                                      --------->ANAC46                                                                                      <---------ANAC55(2)                                                                                      --------->ANAC55(2)                                                                                      <---------O2                                                                                      --------->ANAC55(1)                                                                                      --------->ANAC58                                                                                      --------->TGA1a                                                                                      <---------TGA1a                                                                                      --------->bZIP60(2)                                                                                      --------->ANAC58                                                                                      --------->O2                                                                                     <-----------STF1                                                                                 --------->ARR14(2)                                                                    ---------->DOF2 <---------ALFIN1                                                                    ============================bZIP_DOF                                                            <------ZmHOX2a(2)    <---------ARR14(2)                                                            ===========================HOX2a_HOX2a                                                            ========================HOX2a_HOX2a      ---------->DOF2       ----------->GT1*TSS            --------->ARR11(3)   <------ZmHOX2a(1) ---------->ID1   --------->CCA1(2) ----------->GT1        <---------ARR11(3)<------ZmHOX2a(1)  -----   tttgttgttaaagaagagagatttgggagagtgtgaattggtgaaatttagggatttagaagatcagtttaaaagagaaggaggaaacacgtcagcatca  17517100                                                                                                    <                                                                                                  <--                                                                                                <----                                                                                               ------                                                                                               ------                                                                                             <-------                                                                                            ---------                                                                                           <---------ICU4                                                                         --------->ETT(1)  <--------HAHB4                                                                         <---------ANAC46  --------->YAB1                                                                 <---------ANAC46          --------->ATHB12                                                               <---------ARR14(2)         <---------YAB1                                           <----------DOF2     --------->ARR14(2)         <---------ATHB12                                        <-----------GT1        <-----------HVH21          --------->ICU4                                       <-----------GT1       --------->LBD16           <---------AHL20(2)                                   <---------RVE1(1)       <---------LBD16             --------->AHL20(2)          --------->ANAC46    <---------At4g35610      --------->YAB1 <---------MYB46(3)--------->WOX13(1) ------------>CBF           <---------ANAC46          <---------ICU4 <--------P    <---------AHL20(2) ------->CBF           <-----------RAV1(1) <---------DAG2 --------->MYB52(1)       --------->AHL20(2)   caattcaattctcagccacaagtttatgtggcctctgatattttccttttcgctcattaataccgggtcgggttgtcgggttttattaattaatcattaa  17517200        <----------DOF2     -------->P     ------>MYB46(1)     ------>MYB83    ------>ZmHOX2a(1)   <---------MYB59 --------------->AtSPL8 -----------GT1                                                                                    <- -------ICU4                                                                                   <----- -----TOE2(3)                                      <----------DOF2                   --------->YAB1-- --->AHL20(2)                                  ---------->ID1<-----------HVH21    --------->WOX13(1) --->YAB1           <---------YAB1          --------------->AtSPL8              <------ZmHOX2a(2)<--- --YAB1<---------DAG2                <----------DOF2<---------MYB52(1)   <---------AHL20(2)    ------ >TOE2(3)     <---------ANAC46       ------>ZmHOX2a(1)      <-----------RAV1(1) <---------ATHB12 ----   tatttcctacctttttatgtgtattattcgcatctaatcctttttttttgttcctttattttctgtcgcacatatttattcgatcattcaaaactatata  17517300            --------->YAB1           <---------AHL20(2)          --------->AHL20(2)       --------->AHL20(2)       <---------AHL20(2)     <---------AHL20(2)     --------->AHL20(2)   <---------AHL20(2)   --------->AHL20(2) --------->AHL20(2)        --------->TOE2(3) <---------AHL20(2)  --------->YAB1 --------AHL20(2)   <---------ATHB12                                         <---------AHL20(2) ----AHL20(2)     --------->WOX13(1)                                   <---------AHL20(2) ------->AHL20(2) --------->YAB1                                    ----------->GT1 ------AHL20(2)--------->TOE2(3)                               ---------->DOF2   ----------->GT1 --->AHL20(2)<---------AHL20(2)                            --------->YAB1    <---------YAB1 ----->AHL20(2)--------->YAB1  ---------->DOF2          ------>ZmHOX2a(1)  <---------ICU4      <-----   tatatatatatatataatattaatcataaacttaaaagtatcagttttttttagtttcctatcagaaaagaagttaatttttattgtgaaaatttgttta  17517400               <---------ANAC58                     <---------TOE2(3)               <---------ANAC58        <---------AHL20(1)              <----------DOF2         --------->ATHB12              <---------AHL20(2)              <---------DAG2         --------->ATHB51              --------->AHL20(1) --------->ICU4        <---------AHL20(2)        <---------ARR11(3)<---------------AtSPL8        <---------YAB1      --------->ANAC58     <---------YAB1     <-----------GT1      --------->YAB1        --------->ANAC58<---------MYB46(3) <---------AHL20(2) ----AHL20(2)  <---------ANAC46----------->RAV1(1)  <---------------AtSPL3                     <-----   tttgttttttataattggcgtttaaaaatgaagcaacatattatattggttattaatgtactgattttttttgctttataaatcatctctacatattttt  17517500  Previous    Next  AGI:  At3g47500.1    Description:  CDF3 (CYCLING DOF FACTOR 3); DNA binding / protein binding / transcription factor. Identical to Dof zinc finger protein DOF3.3 (DOF3.3) [Arabidopsis Thaliana] (GB:Q8LFV3;GB:O81600); similar to CDF1 (CYCLING DOF FACTOR 1), DNA binding / protein binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G62430.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79859.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) Range:  from: 17514985    to: 17517043    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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