Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               ------->TEIL                                                             --------->GLK1(2)                                                             --------->ARR14(2)                                                             <---------ARR14(2)                  <---------AHL20(2)                        <---------GLK1(2)                 --------->AHL20(2)                      <-------TEIL              <---------YAB1                            --------->ARR14(1)             --------->AHL20(1)                         --------->CCA1(2)                          <-             <---------AHL20(1)                        --------->ARR11(1)                          --             <---------AHL20(2)                        --------->ARR14(2)                    --------             --------->AHL20(2)                        <---------ARR14(2)                  <---------HSFB2a(1)            --------->AHL20(2)                         <---------GLK1(2)                   --------->MYB46(3)            --------->YAB1                           <---------YAB1                        <---------HSFC1(2)         <---------ICU4                      <------ZmHOX2a(2)  <---------HSFB2a(2)        --------->HSFC1(2)      --------->YAB1      <---------GLK1(2)<------ZmHOX2a(1)<---------CCA1(2)<---------TOE2(3)   ---- >ZmHOX2a(1)<---------AHL20(2)<---------YAB1<---------ARR11(3)  --------->HSFB2a(2)  ---------->DOF2   tgaaatattcaaaattatattaaatacagattataaaacagaacaggatcaacttaagattcgaatctcgaagaatgctaagaatataaaagaaccatcg  17485800                                                                                     --------->KAN4(2)                                                                                    <---------KAN4(1)                                                                                    --------->KAN4(1)                                                                                    <---------HSFB2a(1)                                                                               --------->HSFB2a(2)                                                                           --------->ICU4                                                                         --------->YAB1                                                                         <---------ICU4                                                                         -------->HAHB4                                                                         <--------HAHB4                                                                         <--------ATHB1                                                                         --------->ATHB51                                                                        <---------YAB1                                                                        <---------ATHB51 --------->SPL7                --------->ANAC58    <---------GLK1(1)    --------->ICU4 <<<<<<<<<<<<<< --------SPL7  --------->CCA1(2)        <---------YAB1             ----------->GT1  --------->HSFB2a(1) --------->HVH21               --------->ANAC58    --------->GLK1(1)  --------->YAB1<----------TaMYB80 ->MYB52(1)   --------->ARR11(3)      <-----------GT1           --------->ARR11(3) <---------KAN4(2) ----->LBD16  <---------ARR11(3)   <---------CCA1(2)            --------->GLK1(2)  ---------->TaMYB80   ggggacgatgaagaaagatatagaacgatgaagacgcatatcacgatttgaagaattccttcgtaaaatctgtaataattactagaatattccattggac  17485900                                                                               ---------->DOF2                                                                        <---------ZAT18                                                                        --------->ZAT14      <---------ARR11(3)                                                <---------ZAT14   --------->At5g28300      --------->GLK1(2)                   --------->ARR11(1)            --------->ZAT18  ----------->GT1      --------->ARR11(3)                  <---------ARR11(3)  --------->HSFB2a(1)   --------->CCA1(2) <<<LFY--------->RVE1(1) <---------ARR11(3)--------->CCA1(2)  <---------HSFB2a(1) --------->YAB1    -   agaacaaaaatctctgagaaaatagaagataacttgataccaaagatttgactcaaaaccagaaacattccaagttcacttcaaagataaacagtaacaa  17486000                ----------->GT1                <----------ID1                      <-----------GT1         <----------DOF2                            --------->MYB52(1)                      ---------         --------->TOE2(3)              <----------DOF2                             --------->ARR11(3)         --------->TOE1(3)       <---------------AtSPL3      ------>ZmHOX2a(1)      <---------ARR11(3) ---------->RAV1(1)              <---------ICU4  --------->YAB1  ---------->DOF2    <---------GLK1(2)   cacaacaaaaactttaaaacgaaaaataagttgaattagtacctttagcaaaaataacgcttcctccaaaagaaattcttcgacgagatttttgactcta  17486100                                                                                          ------->MYC3                         ----------->GT1                                                  <-------MYC3             --------->ATHB12                                                            --------->ANAC58            <---------YAB1                                    <----------DOF2 --------->ARR11(3)         ----------->HVH21          ----------->GT1          <---------ANAC58 <---------GLK1(2)     --------->ZAT14    <---------YAB1                  <----------DOF2   ---------->DOF2--------->ANAC55(2)     <---------ZAT14    ----------->GT1        <---------TOE2(3)       <-------TEIL      --------->ANAC58 >ZAT6   ----------->TGA1--------->YAB1  <---------AHL20(2)  <---------ANAC58 <---------ARR11(3) <---   aatactgagtactgacgattgagaaaatgataaaaatttggaaaaaattgatgtttttcttttgctttgaagatgcaaaagatacttggacacgttttag  17486200                  ----------->GT1               <------NtERF2             --------->DEAR3(1)             <---------DEAR3(1)             ----------->HVH21           ------->GAMYB                                                                          <--        --------->MYB52(1)                                 <------------CBF   <---------YAB1    -----     --------->ANAC58                                --------->YAB1         --------->YAB1     <-----     --------->ANAC58                           ------------>CBF           <---------AHL20(2) -------     --------->ANAC46                       --------->ETT(2)               <---------YAB1     <------ ---ZmHOX2a(1)------>NtERF2                *TSS <---------MYB59      <-----------TBP      <----------   gagcttgaagcaacggcgacgagtttatagcatttgtgctcaatagtcgacccaattagaaaattgtttttttttatattataaatctgaaattacgatc  17486300                                                             <---------ANAC58                                                             <---------ANAC58                             <---------ARR14(2)              <---------ANAC46                             --------->ARR11(3)              <---------ANAC55(2)                             --------->ARR14(2)              --------->ANAC55(2)                           ----------->ARR10            --------->MYB52(2)             <---------ATHB12 ---------GT1           <-----------HVH21             <---------ANAC58            ------>NtERF2 ->ZmHOX2a(2)       --------->ARR14(2)                <---------ANAC58           --------->ANAC58 -ZmHOX2a(2)        <---------ARR14(2)               --------->STY1(2)           --------->ANAC58 -->ARR11(3)     --------->YAB1        <---------At5g28300   <---------ANAC55(1) --------->ANAC46 ---ARR11(3)    <---------ATHB12      <-----------GT1<---------STY1(2)         <---------ALFIN1     - -GT1       --------->MYB46(3)--------->CCA1(2)<-----------GT1          <-----------HVH21         <--   tcacccttctatcaacaaatcatattcgtcagatatggaattacagttttaaccttgctagttgcgtctctagttgtcaaaccacgccaatgaacgaagt  17486400                                <---------AHL20(2)                             ------>MYB46(1)                             ------>MYB83                           --------->TOE2(3)                 --------->ANAC58                 --------->ANAC58                 <---------ANAC55(2)                 --------->ANAC55(2)                 --------->ANAC46   <---------AHL20(2)                <---------TOE1(2)  --------->AHL20(2)      <-------GAMYB        <---------MYB59                                    --------->TOE2(3)     ----------->GT1      --------->ANAC55(2)    --------->AHL20(2)         <-----------GT1     <---------MYB46(3) <-----------GT1     ------->TEIL               <----------DOF2 -------->SPL7 ------>ZmHOX2a(1)--------->YAB1   <---------AHL20(2) --------->GLK1(2)<-----------GT1 -------SPL7  --------->TOE2(2) --------->AHL20(2)                 <---------GLK1(2)--------->AHL20(2)   cgaacgatggttatttcctacgtaatatacctaattatataatatgcatttttaaatattagtttgctagattctttttttcttaatttactaaatactt  17486500                                                        <----------DOF2                                                       ------>ZmHOX2a(2)                                                     <---------ARR11(3)                       -------               <-----------GT1                       --------->ARR11(3)                       <------             --------->CCA1(2)                       --------->AGP1                           -------            <---------ARR11(3)                       <---------AGP1                  <-----------GT1            --------->ARR11(3)                       <---------ARR14(2)            <----------DOF2         --------->HSFB2a(2)               <---------YAB1         <---------YAB1  <---------ICU4         <---------HSFB2a(2)         <---------TOE2(3)<------ZmHOX2a(2)         <---------ARR11(3)         --------->HSFC1(1)         <-----------GT1  --------->ARR14(2)         --------->ARR11(3)  <         >>>>>>>ZML2            <----------DOF2     <---------CCA1(2) --------->AHL20(2)      <------   gttgaaatgttctagatatacaattcatgtatgacttttaacattatgcatactagatctttcttatgctcattaaaaactaaatctttacattttctag  17486600                               <----------DOF2                         <----------DOF2                       ---------->ID1                 <---------AHL20(2)                <---------ARR11(3)                --------->AHL20(1)    --------->ZAT14   <-----------GT1                        --------->AHL20(2)    <---------ZAT14  <<<<<<<<<<GT-3b                    ----------->GT1 -->HSFB2a(2)   <---------AHL20(1)                   <---------ZAT2 ---HSFB2a(2)   --------->ARR11(3)                   --------->At4g35610 -->HSFC1(1)    <---------AHL20(2)                   --------->ZAT2 -----------GT1 --------->AHL20(2)                   <---------At4g35610   <-----------GT1      ----- ---HSFC1(1)   --------->AHL20(2)       <---------AHL20(2)   <---------AHL20(2)                 <----   aattactaaactgacaaatatatttttctttttcttttatattttataaacttgaagctggaaataaatatagcattctactatatgtttttcaaaattt  17486700  Previous    Next  AGI:  At3g47420.1    Description:  glycerol-3-phosphate transporter, putative / glycerol 3-phosphate permease, putative. similar to transporter, putative [Arabidopsis thaliana] (TAIR:AT4G25220.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78171.1); similar to hypothetical protein OsI_016348 [Oryza sativa (indica cultivar-group)] (GB:EAY95115.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42697.1); contains InterPro domain Major facilitator superfamily MFS-1 (InterPro:IPR011701); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 17483327    to: 17486243    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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