Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------ARR14(2)                                                        <---------GLK1(2)                                                        --------->ARR14(2)                                                       <------NtERF2                                                     --------->LBD16                                                   ------>NtERF2                                                   --------->ABI4(1)                                                  --------->DREB2C(2)                                                  --------->DEAR3(1)                                                  <---------ALFIN1                                                  ------->GAMYB                                                 <------NtERF2                                                 --------->DEAR4(2)                                                 --------->DEAR3(2)                                                 --------->MYB46(3)                                                 --------->ATERF1(1)                                                ------>NtERF2                                                <---------ATERF1(1)                                                --------->ABI4(1)                                               <---------ALFIN1                                               --------->DEAR3(1)                                              --------->ATERF1(1)                                              <------NtERF2                                             ------>NtERF2                                             <---------ATERF1(1)                                            <---------ETT(2)                                <--------                        <-----------HVH21   --------->DEAR3(1)                        ----------->TGA1                       ------->GAMYB      <-----------HVH21                         --------->YAB1                      --------->MYB46(3) ------->GAMYB--------->LBD16               <---------ICU4                     -------->P          --------->DEAR3(1)   --------->ARR14(2)   <---------YAB1                  <---------MYB52(2)    --------->MYB46(3) --------->YAB1          --------->ICU4        <----------DOF2--------->YAB1   <------------AtMYB77  <---------ARR14(2) --------->YAB1 --->ANAC46    --------->ZAT14      ------>ZmHOX2a(1)--------->RAP2.3(2)        <---------ATHB12 --->RAV1(1)   <---------ZAT14     --------->TOE1(3) --------->RAP2.6(2)        --------->ICU4<------ >AtMYB61    --------->ANAC46      --------->TOE2(3)<---------LBD16           <---------At4g35610  <<   caacccttctctttcacttcactaaccatcacatcttccttaaccgtcgccaccgccggaatcgtaacctctcccttctccgatgatgatgacgcttctt  17480000                                                                                  --------->AtMYB61                                                                            --------->CCA1(2)                                                                            --------->ARR14(1)                                                                           --------->ARR14(2)                                               <<<<<<<<<TBF1 --------->ANAC46<-------TEIL                                            <<<<<<<<<TBF1  --------->ZAT6  <---------ARR14(2) --DOF2     <---------ZAT14            <------------------------ANAC81     <---------GLK1(2)    <---- ---ANAC46  --------->ZAT14        ------>ZmHOX2a(1)   <----------DOF2     --------->ARR11(1)  ------ <<<<<<<<<<<<<<<LFY             ------>ZmHOX2a(1) <---------At4g35610    ----------->ARR10   <-------   ggaacaatggccactgctcagcctctacttcttcctccttctcttcttcttcttctgctttacactcgattagacaagattcgaccaaagagtaatcctc  17480100                                                                                          <------MYB46(1)                                                                                          <------MYB83                                                                                         <---------AtMYB61                                                                                         --------->MYB111(2)                                                                                         --------->MYB46(2)                                                                                         --------->MYB55(2)                                                                                         --------->MYB111(1)                                                                                         <---------MYB46(3)                                                                                         <---------DEAR3(1)                                                            <---------ATHB12            <--------P                                                 --------->LBD16                        <---------MYB55(1)                                               <---------LBD16                         <---------ANAC58                                             <---------ARR14(2)                        <---------ANAC58          <---------MYB52(1)                 --------->ARR14(2)                       <---------MYB46(3)      <---------At5g28300                 <---------------AGL15                       --------->ATHB12     <-----------GT1 --------->ANAC46    <-----------------AGL2               --------->LBD16   <----------DOF2   --------->ANAC58    <-----------------AGL1           <---------WRKY18(1) -----ALFIN1         --------->ANAC58    ----------------->AG <-----------GT1<---------LBD16 >ZmHOX2a(1)--------->YAB1               ----------------->AGL1          ----------->HVH21----------- --ICU4  <-------GAMYB --------->YAB1    ----------------->AGL2       ----------------->AGL1     ----   accggttttaccgttgataatacaagcattagtttccaaactttccatttccggtttgatcaataaaccattaccatgaccgggcaattggttggtgata  17480200                                                                                      ----------->HVH21                                  ------->GAMYB                                       <------NtERF2                            --------->AtLEC2                                         --------->LBD16                            --------->ANAC58                                       <---------LBD16                            --------->ANAC58                                       <---------ANAC46                        ------>NtERF2     <-----------GT1              <---------ALFIN1 --------->SPL7 >GT1          <-----------GT1   --------->ANAC58                   ------>ZmHOX2a(1)<------NtERF2 <- ------>DOF2 <---------KAN4(2)   --------->ANAC58       <---------ARR11(3)    ------>ZmHOX2a(1)  <---   aaagcctccatttcgaataacctctctgccatgcaacgcagtttatacaactcttcaatgtcttcttctccttccacatcctttggccgggacgatgtct  17480300                 --------->HSFB2a(2)           --------->ARR11(3)           <---------ARR11(3)           <-----------ARR10                               <---------YAB1         <---------HSFC1(2)                              --------->YAB1         --------->HSFC1(2)                              <--------HAHB4   <---------MYB52(1)                                    <---------ICU4                          <---  <---------RAP2.6(3)                                   <---------YAB1            --------->HSFB2a(2) <---------MYB46(3)                                     --------->ICU4            <---------HSFB2a(2) --------At4g35610      <---------YAB1                  <------ZmHOX2a(2)      <---------------AGL15 --------RAV1(2) <---------HSFB2a(2)          <<<<<<<<<<<<<<<<<LFY  ---------->DOF2              ----   cagccgttagaagggtcttcgcgaatgtgattccgagttgcatttttcgaacattgggatcattatagtcaaaagtgattacttcaagaagagactcgag  17480400                               <----------DOF2                              <---------ICU4                              ------>ZmHOX2a(2)           <---------TOE2(3)                            --------->ARR11(3)           <---------ICU4                            <---------ARR11(3)           --------->YAB1                     ---------                  --------->ZAT6                        <---------ATHB51           <-----------------             --------->HSFB2a(2)                        <---------ATHB12           ---------->ID1 ------ARR11(3)   <---------ALFIN1                  ------------>CBF      <-----------GT1  <--------- ----->ARR11(3) ----------->RAV1(1)                ------>ZmHOX2a(2)  --------------------->WRI1   ttcttcaagtttcttctccaacactgagttgatctttgccttcattctcttgatcccaataatgtttttttttttttttctcttcgtcgtattttacaat  17480500                                                                                      --------->ARR14(2)                                                                                      <---------ARR14(2)                                                                                <-------MYC2                                                                                ------->MYC3                                            <-------GAMYB                       ------->MYC2                                          <---------DEAR3(1)                    <-------MYC3                                        ------------>AtMYB77                 <---------ALFIN1  ------                                       ----------->HVH21                  --------->ZAT14      ------                                    <--------P                            <---------ZAT14      <-----                                   <---------ANAC58         ------->TEIL  <---------ZAT18  <---------MYB52(1)                                   <---------ANAC58      <---------YAB1   --------->ZAT18  --------->DOF5.7(2)                                   <-------GAMYB      <-------TEIL     <---------ANAC58  --------->ANAC46 --->CBF--------->ZAT14           <------MYB46(1)--------->YAB1        <---------ANAC58  --------->ANAC55(2) ----WRI1                         <------MYB83  <---------YAB1         <---------ANAC46 <-------TEIL --GT1 ----------->GT1    <---------TOE2(3)<---------MYB46(3)      <----------DOF2<-------TEIL<------   gtcgaaacagtgtaatacaaaaacttctaatgtagtgggttgcgacggttatcatgttcatgaatgtgtcttttcgtgcacacgttcatatacgttacct  17480600                                                                            <---------AHL20(2)                                                                            <---------AHL20(1)                                                                            --------->AHL20(2)                                                                            --------->AHL20(1)                                         ------>ZmHOX2a(1)               --------->YAB1                                        --------->TOE1(3)               <---------AHL20(2)                                        --------->TOE2(3)        <---------RVE1(1)                                   <-----------GT1              --------->ARR11(3)                                <---------GLK1(2)               <---------ARR11(3)                                --------->ARR11(3)           <---------HSFB2a(2) --->TOE1(3)                    <---------ARR11(3)    ------>ZmHOX2a(1) <---------YAB1 --->TOE2(3)             <---------AHL20(2)        <-----------GT1    --------->YAB1        <-------- ----MYB59<------------CBF<---------AHL20(2)  --------->TOE2(3) <---------GLK1(2)    --------->AHL20(2) ---ANAC55(2)            --------->AHL20(2)   <---------DAG2 --------->HSFB2a(2)--------->YAB1      -   aaaaatgtgttccattggatgtttttttttaatagattttctccttaacctttttcctctcttctagattttttataattaattagaataaatagatgct  17480700                                                                                              <------                                                                                              <------                                                                                              <xxxxxx                                                                                            xxxxxxxxx                                                                                      <---------At4g35610                                              <------ZmHOX2a(1)               <xxxxxxxxxxxxxxxxxxxxxx      ---------->DOF2                         ----------->GT1               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --------->DAG2                     ----------->GT1                        --------->AHL20(1)<xxxxxxx -GLK1(2)              ---------->DOF2       ----------->GT1      --------->GLK1(1)   xxxxxxxxxxxxxxx --------->DOF2    ---------->DOF2 ----------->GT1--------->AHL20(2) --------->TOE2(3)--------->At4g35610   caaaaagagaaagcatagattaaaagaaagttttgcaagggaaaaataggataaaaataccaattgagaaatctaaatatactaaatcagcagtcacttt  17480800                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                       <---------ARR11(3)                                                                      <------ZmHOX2a(1)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                    <---------TOE1(2)                                                                    <---------TOE2(2)                                                                    xxxxxxxxxxxxxxxx>smallRNA(i)                                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                  xxxxxxxxxxxxxxxx>smallRNA(i)                                                                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                 --------->ANAC58  <---------ANAC58     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                        --------->ANAC58  <---------ANAC46   --------->MYB52(1)                                            --------->ANAC46  <---------ANAC58  <---------ATHB12                                            xxxxxxxxxxxxxxxx>smallRNA(i) ---DAG2             <---------WOX13(1)                  xxxxxxxxxxxxxxxx>smallRNA(i) ----DOF2   ------->TEIL                     <---------AHL20(2) <---------LBD16   ---------->ID1 xxxxxxxxxxsmallRNA(s)     --------->bZIP60(2)  <---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxx>smallRNA(si3)                --------->AHL20(2) xxxxxxxxxxxxxxxx>smallRNA(i) xsmallRNA(le3)    --------->ATHB12   <-----------GT1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <--- xxxxxxxxxxxxxxxsmallRNA(si3)        <---------YAB1      <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxx xxxxxxxx>smallRNA(i2)----------->HVH21 <---------YAB1<----------DOF2<xxxxxxxxxxxxxxxxxxsmallRNA(fl3)   tccaataactgatgcatttagtgattgacacatcagtttattactatttttttattctttcattttcacgcaggatttttatgtgtcgtttttagttaac  17480900  Previous    Next  AGI:  At3g47410.1    Description:  unknown protein Range:  from: 17479780    to: 17480445    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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