Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------SPL7   <---------YAB1                                     --------->HSFC1(1)          <---------ANAC58  ----------->HVH21                                     <---------HSFB2a(2)         <---------ANAC46 ------>ZmHOX2a(2)                       --------->SPL7--------->HSFB2a(2)         <---------ANAC58<---------At4g35610-       ----------->HVH21      <---------CCA1(2)              <---------At4g35610<---------AGP1      -       --------->MYB46(3)   --------->AtMYB61        --------->ATHB12           --------->ARR14(2)  <       --------->DEAR3(1)--------->ZAT6           --------->GLK1(1) --------->ARR14(2)              < ------AHL20(2)      --------->LBD16 <---------HSFC1(1)      --------->At4g35610<---------ARR14(2)--- ----->AHL20(2)     --------->ANAC55(2)           <---------GLK1(1) <---------ARR14(2) ----------->GT1 --->AHL20(2)       <---------ANAC55(2)      <---------LBD16 <------NtERF2 <----------DOF2     <-----   tatatagcatcgaccgcgaagtccgtaacaccatctcttctagaagactcggatttcattggcagaggcgtatgctcctttggatctgatagttaaaaca  17461700                <---------ANAC58 --------->ARR14(2) --------->ARR11(3) <---------ARR11(1)                                                                  <---------AHL20(2) <---------ARR11(3)                                                     --------->ANAC46 <---------ARR14(2)                                                     --------->ANAC58          <-- ----->MYB46(1) <---------ANAC46                                        --------->ANAC58          --- ----->MYB83 <----------DOF2                                   <-----------GT1       --------->AHL20(2) ---------CCA1(2)                                              <---------AHL20(2)--------->AHL20(2)-- ---------ARR14(1)      <---------AHL20(2)     <---------AHL20(2)      ------>ZmHOX2a(1)         ---- ------>AtMYB61 <---------ANAC58        <----------DOF2     <---------ICU4   --------->MYB46(3)  <--- -----ID1 <-----------GT1            <-----------GT1       --------->ICU4  ----------->RAV1(1) ------   ccaaatcttgtgtaactttcttgtatataatgctctgtttaactttcatttttttttagtaatatttacattcctagcaacaaatatttatttatagcaa  17461800                  <--------HAHB4                  <--------ATHB1                  --------->ATHB51                  <---------ICU4       <---------AHL20(2)     <---------------AGL15                 <---------AHL20(2)                         <---------MYB52(2)     <---------AHL20(2)                   <---------AHL20(1)                        --------->WOX13(1)    <---------AHL20(1)        --------->ANAC46                                    ------------>CBF    --------->AHL20(1)        --------->ANAC58                           <---------AHL20(2)  <---------AHL20(1)          --------->ANAC58 --------->AHL20(2)      <---------AHL20(2)  --------->AHL20(1) <-----------GT1      --------->AHL20(1)          <---------AHL20(2) -------AHL20(2)  -------->HAHB4        --------->AHL20(1)            <---------AHL20(1) ------>AHL20(2)  --------->YAB1        <---------AHL20(1)            --------->AHL20(1) ------->AHL20(2)--------->ICU4        --------->AHL20(2)             --------->AHL20(2)            - ----->ICU4      <---------YAB1    --------->MYB46(3)                 <---------ARR11(3)           <- ------ATHB12    <---------ATHB51----------->RAV1(1)   <-----------GT1--------->ARR11(3)        <---- --->WOX13(1)  --------->YAB1------>ZmHOX2a(1) <---------AHL20(2)    --------->AHL20(2) <-----------GT1   ttaatatatatttttagtaataattacattcctagcaacaaatatatatttattttttaacaaatacacaaatatatttttagtagcaattaacctattt  17461900                                              <---------ALFIN1                                            ==========================HOX2a_HOX2a                                            <------ZmHOX2a(2)         <-------TEIL --------->YAB1       <---------ARR14(2)        --------->CCA1(2)                  --------->AGP1  <---------ARR14(2)                      <-       <---------ARR11(3)--------->AHL20(2)--------->ARR14(2)                             <---------YAB1 ----->ZmHOX2a(1)  --------->YAB1          <---------ARR11(3)                            --------->AHL20(2) --------MYB59------->GAMYB                --------->ARR11(3)  ------>ZmHOX2a(1)         <---------AHL20(2) -------GT1----------->RAV1(1)   --------->ETT(2)          --------->ARR14(2)           --------->YAB1   tcctaacaagatacaacagaagaataagaaaatagtagacagatagatccacttgctaccatttcctctccctgtagccttctgtgtctattaaaataga  17462000                                                                               <---------HSFB2a(2)                                                                            --------->ARR14(2)                                                                            <---------ARR14(2)             ---------->DOF2       ----------->TBP                 <---------AtMYB61         xxxxxxxxxxxxxxxx>smallRNA(s)                           --------->ALFIN1         ----------->GT1      >>>>>>>>>MYB98                 --------->MYB111(2)                  ---       ---------->DOF2      <-----------GT1                  --------->MYB111(1)   ---------->DOF2<-- --------ZAT14             --------->AHL20(2)               <--------P <------------CBF       <------   cttcacttgtaaagtaaaagtttgaacattttaacatataaaaaaaaaaaccaagtagagaggtaagtggtggtattggttctgcaaaagaacattatgg  17462100      --------->MYB46(3)                                               <-----------GT1     -------->P                                <----------DOF2        <---------AHL20(2) ------>CCA1(2)                   ------>ZmHOX2a(1)            <-----------GT1 -------GLK1(1)          <<<<<<<<<TBF1     --------->YAB1     <-----------GT1 ---TOE2(3)   --------->TOE2(3)------>ZmHOX2a(1)         ------>ZmHOX2a(1) <----------DOF2   <-------   atatacttaccaccattctcaatcttcttcttcctcctcttactatcatctttctcttcctgttttacccattttatcttttgatcaaacttgtgctttg  17462200                                                             ------>ZmHOX2a(1)                                                       --------->HSFC1(2)                                                       <---------ZAT2                                                       <---------HSFC1(2)                                                       <---------HSFB2a(1)            <----------DOF2                                                       --------->ZAT2                 ---------------                                                       --------->At4g35610     --------->MYB46(2)                                                       <---------At4g35610     --------->MYB52(2)                                                       --------->HSFB2a(1)     <---------MYB46(3)                   --------->HSFB2a(2)                <---------ARR14(2)       --------->MYB111(1)           <-----------HVH21                          <-----------ARR10      <---------MYB52(1)          --------->TOE1(3)                           --------->ARR14(2)     <--------P          --------->TOE2(3)                         --------->LBD16         ------------>MYB.PH3(2)         <---------HSFC1(2)                    --------->MYB46(3)          ----------->GT1         --------->HSFC1(2)                    <---------ATHB12     --------->At4g35610         <---------HSFB2a(1)       --------->DAG2 <---------LBD16   <------NtERF2<---------MYB52(1) ---DOF2------->TEIL              ---------->DOF2--------->MYB52(1) <---------At4g35610   tcttcgtaagaaccttcacttcgaaaacgtagccagaaaagtagttctaatcaccggagcttcctctggcatcggagaggttagttagctttggatgcta  17462300                     <---------AHL20(2)         --------->MYB52(2)         --------->MYB111(1)                                                                     ----         --------->MYB46(2)      --------->YAB1                                                  ----       <---------MYB52(1) <-----------GT1                           <---------YAB1               ----  <----------DOF2  <---------AHL20(2)                        --------->YAB1                     <---- ------>WRI1    <---------AHL20(1)      --------->MYB52(1)  <---------YAB1       --------->AHL20(2) -   tgcccttttgttagttagtatattttttttaccaatactaagtaactgagtagatttagtctattatactattactgattcaaatatatgtgtgtatata  17462400           <<<<<<<<<<<<<<<<<LFY          ----------->HVH21          <---------ETT(1)         ------>ZmHOX2a(2)        --------->CCA1(2)       <---------ARR14(2)       --------->ARR14(2)       --------->AGP1 ----->ANAC55(2)                                                <---------GLK1(2) ----->YAB1----------->RAV1(1)                             <---------ANAC46 ----->ANAC46                  <---------TOE2(3)           <---------ANAC58 ---TEIL<------ZmHOX2a(2)      <---------TOE1(3)           <---------ANAC58                     ----- -------->AHL20(2)       <---------ZAT6            ------>ZmHOX2a(1)                --------->ZAT18   cataatatagatccgacattggtgatagtgtttatggttttgttttcgaggtcctattttgtcgtggaatctcttgcaactatatgtgtgctatttgatc  17462500                                            --------->AHL20(2)                                      <                                         --------->ANAC46     <-------GAMYB                        <-                                     <------ZmHOX2a(2)       <------MYB83                    <-------                                    <---------ARR11(3)       <------MYB46(1)                 <-------                                    --------->ARR14(2)  <---------YAB1                  <---------ANAC58                                    <---------ARR14(2) --------->ARR11(3)          <---------TOE2(3)<                                    --------->ARR11(3) <---------ARR11(3)          <---------TOE1(3)<    <---------YAB1    <-----------GT1--------->CCA1(2)--------->YAB1            <---------YAB1     -- ->ZmHOX2a(2)      --------->YAB1   --------->AGP1   <---------YAB1 --------->ARR11(3)  <---------ANAC58   tatttgataatagacgactaaaaataactaaatgtatagatccacataaattgatatgatatttggttgagaacttgagattgttaatgttcttgtcttg  17462600  Previous    Next  AGI:  At3g47360.1    Description:  ATHSD3 (HYDROXYSTEROID DEHYDROGENASE 3); oxidoreductase. similar to ATHSD2 (HYDROXYSTEROID DEHYDROGENASE 2), oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G47350.1); similar to 11-beta short-chain dehydrogenase reductase [Brassica napus] (GB:ABM90634.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 17462097    to: 17463828    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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