Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <--------HAHB4                   <---------ICU4                   -------->ATHB1                   --------->YAB1        --------->MYB59        <---------TOE1(3)        <---------TOE2(3)  --------------->AGL15  <---------------AGL15                                  ---------->DOF2 ----------------->AGL1                                ----------->HVH21 ----------------->AGL3                               --------->TOE1(3) <-----------------AGL2                               --------->TOE2(3) <-----------------AG <-----------GT1           <---------ICU4                        ---------->DOF2 ----------------->AG<---------YAB1           ===================RAV  <---------At4g35610 <-----------------AGL1                       ----------->RAV1(1)     --------->At4g35610 -----------GT1    --------->ATHB51       <--------P <---------ANAC55(2)         --------->ATHB12 ----------GT1    --------->ICU4 <---------AHL20(2)  ----------->RAV1(2)   --------->YAB1        ----   ttttccaatttaggttttgaattattactcactattttatcagggtagcaacattacctgaaagtgtctctgagctatcacaaagattgaaagaagttta  17457400                                                                <---------ATHB12                                                              --------->WOX13(1)       <---------ALFIN1                     <---------DAG2                      ------->TEIL                 <---------ZAT18                     <----------DOF2                  <---------ANAC55(2)   <---------TOE2(3)              <----------DOF2                         <---------ANAC46      <---------TOE1(3)         <----------DOF2                        <---------TOE2(2)          <-----------GT1  <-------- ----->ANAC55(2)  <-----------GT1               <---------TOE1(2)  ------->TEIL  ---------->DOF2 <---   tgtgatcaaaactttccttttaactttattgttttcagtattagctatcttatgttatgtatatcaatgaatgtttttaacgattaagcacaccctttaa  17457500                                                     --------->ANAC55(2)                                                    <---------TOE2(3)                                              --------->SPL7                                              ------->TEIL<---------YAB1                                            <---------SPL7--------->ICU4                                          --------------->AtSPL3                              <------ZmHOX2a(2)     <---------TOE1(3)                             <---------ARR11(3)    <-----------RAV1(2)                        <------ZmHOX2a(2) <---------------AtSPL3                    <---------TOE2(3)    --------->At4g35610            <---------YAB1           ---- --DOF2    <---------TOE2(3) --------->ARR11(3)   <-------TEIL <---------------------WRI1    -------- --------GT1     <---------YAB1          <---------At4g35610 ------->TEIL             ------->TEIL  -   tacagtcttgtttaagaatattatggatcaagatcaaaaatttagctgtacgttcaggtaatgaatgcgatgttctgaatgagaaatgaaactaaaatca  17457600                                                                  --------->YAB1                                                       <-----------GT1                                       <---------CCA1(1)          -------->HAHB4          <----------                     <---------ANAC55(2)          <------ZmHOX2a(1)         ---------->DOF2                     --------->ANAC55(2)       <---------AtLEC2   <---------ICU4        <----------DOF2 ----->AtLEC2   --------->ANAC46       <---------RVE1(1)         <---------ATHB51 --------->MYB52(1) ->ARR11(3)<----------DOF2            --------->ARR11(3)         <---------YAB1   <---------At5g28300 ------>TEIL<-----------HVH21         <---------ARR11(3)         --------->ICU4   -------->P --------   tgcatttagataactttcacatcacttgatagagagggacgatatttttgcaggatttaacttcgtaattatggctaacaaagctaccgtctttacatta  17457700   <---------LBD16                                            ----------->GT1  <---------LBD16         <----------DOF2      --------->AHL20(2) <---------ANAC58      ------>MYB83          <---------ANAC55(2)       ---------->DOF2 <---------ANAC58 <-----------GT1   --------->AHL20(2)      <---------ANAC58 -GT1--------->LBD16   ------>MYB46(1)   <-----------HVH21  <---------ANAC58                 -------- ->TOE2(3)--------->MYB52(1)      <----------DOF2           <---------ANAC46         <---------AHL20(2)   tttgctcggggataactgaaatacctccctttctagctttaaatgtcacttaaatagccttcgcttgtaaaataaaagtttgaatatttaaaccagaaag  17457800                                                  --------->TOE2(3)                                               --------->ZAT14                                  <---------GLK1(1)                                  --------->CCA1(2)                                  --------->GLK1(1)                       <---------At4g35610 --------->ANAC46           ------>ZmHOX2a(1)            <-                       --------->At4g35610 --------->ZAT6          ------>ZmHOX2a(1)              <--   *TSS      <---------YAB1      --------->ARR14(2)          <<<<<<<<<TBF1                   ------>ZmHOX2a(1) -->DOF2     ----------->HVH21   <---------ARR14(2)      <-----------GT1                  ---------->ID1   ctaagtagagaggttgtgatgggtctgcaaacatggatatgcttcacactattctcaattttcttcttcctcctcttactatcagttttctcgtcctatt  17457900                                                                                                 ----                                                                                                 ----                                                                                               <-----                                                                                              ------>ZmHOX2a(1)                                                                                        <---------HSFC1(2)                                                                                        --------->At4g35610                                                                                        <---------HSFB2a(1)                                                                                        --------->ZAT2                                                                                        <---------ZAT2                                                                                        <---------At4g35610                                                                                        --------->HSFC1(2)                    ------>MYB46(1)                                                     --------->HSFB2a(1)                    ------>MYB83                                                       --------->ARR14(2)                  <---------MYB59                                                      <---------ARR14(2)           <----------DOF2                                                             <-----------ARR10        <-----------GT1                                                              --------->LBD16       <-----------GT1                           <----------DOF2                   <---------LBD16      <---------AHL20(2)  <---------YAB1 ------->TEIL                           --------->MYB46(3) ----------GT1    <---------MYB46(2)  --------->ANAC58             ---------->DOF2--------->MYB52(1) ---------GT1  <-----------GT1        --------->ANAC58        <---------ANAC46  <---------ATHB12-----   ttacccattttatctttttaccaaacttatgagttgtcttaagcaccttcactttgaaaacgttactgggaaagtagttctaatcaccggagcttcctcc  17458000                                                     <------MYB46(1) <------NtERF2                                       <------MYB83 <---------At4g35610                               <--------P                              --------->YAB1 --------->At4g35610                              <-------GAMYB              --------->MYB46(3) ----->LBD16                                     <---------MYB46(3)--------->ICU4         --------->ICU4 -->NtERF2   --------->STY1(2)    <---------AHL20(2)<---------AtMYB61      ----------->RAV1(1) ----LBD16   <---------STY1(2)    --------->AHL20(2)<---------MYB46(3)    <----------ID1  <---------ATHB12 ---->ANAC46--------->MYB52(2)<---------YAB1    <---------AtMYB61--------->YAB1  --------->AHL20(2)   ggcatcggagaggttagctagtattggatgttatgtttaatttgtttgttttggttggtcttatctataatttttagcaacaaataaaaacaatgatgca  17458100                                      --------->ANAC55(2)                                      <---------ANAC55(2)                                 --------------->AtSPL8                                 <---------------AtSPL8                           --------->ANAC55(2)                       --------->YAB1<-------TEIL                     <---------WOX13(1)  <---------ICU4                  <---------YAB1<---------WOX13(1)               --------->ICU4<---------AHL20(2)             <---------ICU4<---------ANAC55(2)<---------ANAC55(2)       ---------->DOF2   gaaagttttttttaaaaattatgaatgatatgtaattggtacataatcacgtttggaaaacgaaaacttgaattcaaagtcaaatattgttttggacgtt  17458200                                                                         --------->At5g28300                                                                    --------->ZAT14                                          --------->ATHB12          <---------ZAT14                                         <---------YAB1             --------->REM1(2)         -------                                        <---------TOE2(3)         --------->LBD16             <------                                      ----------->HVH21          <---------ANAC46             -------                                  <---------YAB1             --------->YAB1     ----------->GT1                              ------>ZmHOX2a(1)       --------->ZAT18   ----------->GT1       <------                              <----------DOF2         <---------ZAT14  --------->ZAT6         -------   <---------YAB1           ------>ZmHOX2a(2)  <---------ANAC58  <---------ANAC58             <------ --------->YAB1--------->SPL7--------->TOE2(3) <---------ANAC58  <---------ANAC58 <---------YAB1  <--   ctatcatcatacatatgtacgaccaattgatcctttatatttgacgattgctcgagtagactatcatccgtgaacagtaaaattgttatttggaaatata  17458300  Previous    Next  AGI:  At3g47350.1    Description:  ATHSD2 (HYDROXYSTEROID DEHYDROGENASE 2); oxidoreductase. similar to ATHSD3 (HYDROXYSTEROID DEHYDROGENASE 3), oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G47360.1); similar to 11-beta short-chain dehydrogenase reductase [Brassica napus] (GB:ABM90634.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 17457803    to: 17460191    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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