Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------MYB46(3)         --------->AHL20(1)         <---------ARR11(3)         --------->ARR11(3)         <---------AHL20(1)         --------->AHL20(2)         <---------AHL20(2)        --------->AHL20(2)                ----------->GT1   --------->LBD16              --------->YAB1  --------->ANAC46       <-----------GT1------>MYB46(1)   --------->AHL20(2)  ----------->GT1   <---------DAG2      ------>MYB83   <---------ANAC55(2)                 <--------- <---------LBD16    <----------DOF2<-----------GT1 --------->YAB1                    <---------MYB46(3)   ttacccgtaaatatattggttactttttatccaaatataaccaaatgtaacaaaaatacttaaattatctaaaaaaaactataacattggttacttttat  17364300                                             <---------LBD16                                           --------->ARR14(2)                ------->TEIL               <---------ARR14(2)        >>>>>>>>>RAP2.2                    --------->KAN4(2)                                <--------     <---------CCA1(2)                    <----------TaMYB80<---------AHL20(2)              ---------    <---------AHL20(1)                ----------->GT1      --------->AHL20(2)             --------->AHL20(2)    --------->AHL20(1)            <---------ARR11(3)       <---------AHL20(2)            --------->AHL20(1)    <---------ARR11(3)            --------->ARR11(3)      --------->YAB1                --------->AHL20(2)    --------->ARR11(3)           --------->RVE1(1)    <---------YAB1        <---------TOE2(3)   --------->AHL20(2)            --------->CCA1(1)    <---------AHL20(2)    <---------TOE1(3) -DOF2<---------ARR11(3)   --------------->AGL15    --------->YAB1     <---------MYB46(3)<---------AHL20(1)   cccaaatatatctaaatgtatatgaattactaaaaatatctagtatattcggatttataattttaatttttggtgtttgaggtattacaaatatatatat  17364400                                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                <---------ARR14(2)                                                              <---------DEAR3(2)               <-----                                                              <------MYB83              --------->ALFIN1                                                              <------MYB46(1)           <---------REM1(1)                                                             --------->MYB59          <---------ANAC46                                                            <-------TEIL             xxxxxxxxxxxxxxxx                                                          <---------ARR14(2)        <---------ZAT14                                                          --------->ARR14(2)    <--------P     <-----                                                        --------->LBD16        <---------MYB52(1)                                     <---------ANAC46  <---------ANAC46      <---------HSFB2a(2)<----                                    <---------LBD16   <---------LBD16        --------->HSFB2a(2)-----                 <---------YAB1 <---------ARR14(2)    <-------TEIL          <---------ANAC46  -------    <---------AHL20(1)          --------->ARR14(2) <------MYB46(1)          <---------LBD16   <------    --------->AHL20(1)         <---------CCA1(2)   <------MYB83 --------->ARR14(2)  --------->ZAT14 -AHL20(2)<---------TOE1(3)    --------->GLK1(1)  --------->MYB59          <---------LBD16   <------ZmHOX2a(1) >AHL20(2)<---------TOE2(3)   <---------MYB52(1)  ----------->ARR10  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   aactaatatttttaggtttatatttgtattcgggtatctacgggtattagattaggtccgggttcggttcgggttttttcgggtagtgaagtgtaggatc  17364500                                                                               --------->ICU4                                                                          --------->LBD16                                                                          ----------->GT1                                                                         <---------ANAC46                                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                        <---------LBD16   --------->ANAC55(2)                                                --------->ARR14(2)  <---------TOE2(3)                                                   <---------ARR14(2) <-----------RAV1(2)                                            <---------ARR14(2) ------------AGL1                                   <-----------GT1 <------MYB83 xxxxxxx>smallRNA(si3)                            <----------DOF2   <------MYB46(1)    xxxxxxxxxxxxxx -ZmHOX2a(2)                                 <---------ANAC46   --------->ARR14(2)   xxxxxxxxxxxxxxxx ---TEIL                                    <---------LBD16   <---------MYB52(1)<---------ICU4    <-- ->ZmHOX2a(2)                              <-----------GT1 <---------ANAC46    <---------YAB1     --- -->ARR14(2)                <-------TEIL<---------YAB1   <---------ARR14(2)xxxxxxxxxxxxxxxx>smallRNA(i) ---ARR14(2)   <------------CBF       --------->AHL20(2) --------->ARR14(2)<---------MYB52(1)     ---   cattcaggtaattctaaaattgagttcgggttcagttcgattatttttcgggtttttcggttcgggtatttggttccggttattatggccaggcctagcg  17364600              <---------------AGL15                    <------MYB46(1)           <---------YAB1                              <------MYB83         --------->YAB1                             <---------MYB52(1)    ------------>CBF                                <<<<<<<<<MYB98 xxxxxxx>smallRNA(se3)                       <------MYB46(1) xxxxxxx>smallRNA(s2)----------->GT1         <------MYB83--------->ARR14(2) -------ARR14(2)   ---------->DOF2          <---------TOE2(3) ------>GLK1(2)   <---------AHL20(2)        --------->MYB59 ------>ARR14(2)----------->TBP       ------------>CBF--------->MYB59                       ---------   aatatgttcaattttgatatataaagaaaaattctaaaactccaattaggttaagttaggtttcgctagaatagcctttgaaacgtttgaagaagacaat  17364700                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                             <-------                                                                                             --------                                                                             ----------->ARR10 <-----                                                                       --------->DAG2     ------>ZmHOX2a(1)                                                                      ---------->DOF2  ==============                                                               ---------->DOF2         <------ZmHOX2a(2)          <---------RAP2.6(2)                              <----------ID1 <----------ID1 <-----------         <---------At5g28300  ---------->DOF2       --------->DAG2----------->GT1     --------->ARR14(2)    <---------ANAC46        --------->AtMYB61      --------->DAG2--------->DAG2       <---------ARR14(2) --->CBF <---------LBD16--------->MYB46(3)        ---------->DOF2<---------TOE2(3) ------------------   gaagttgtgtttacggctattgtgcatccaccaaaagaaatttttggctaagaaaagggaagcgaaaaaggttaaagcgaagaaactcgatcctctatcc  17364800                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                            <-----------ARR10                                     ------>NtERF2                            --------->ARR11(3)                                   --------->DEAR3(1)                            --------->AGP1                                       --------->RAP2.3(2)                            <---------AGP1                                       --------->RAP2.3(3)       <-----------GT1      --------->ARR14(2)                                  --------->RAP2.3(1) <------NtERF2              <---------ARR14(2)                                  --------->ATERF1(1) ----->NtERF2               <---------ARR11(3)                                 <---------ATERF1(1) ------->DEAR3(1)          <---------CCA1(2)                                 <---------ZAT18 --------ALFIN1       ------>ZmHOX2a(2)                       --------->ATHB12 <---------RAP2.3(1) ----->LBD16        --------->ARR14(2)                <---------ZAT14     --------->LBD16 ------ATERF1(1)    <---------ARR11(3)                --------->ZAT14   <---------LBD16 ---->ANAC46        <---------ARR14(2)           <---------ANAC58     --------->ARR14(2) --ARR14(2)    ======================HOX2a_HOX2a <---------ANAC58     --------->GLK1(2) ->ARR14(2)    =====================HOX2a_HOX2a  <---------ANAC46  <---------TOE2(3)       <---------AtMYB61 ----LBD16     ==============HOX2a_HOX2a   <---------TOE2(3) --------->ICU4  --------->ABI4(2) =====================HOX2a_HOX2a          <---------TOE1(3) <---------YAB1 --------->ALFIN1 ------AGL1    ------>ZmHOX2a(1)           <---------YAB1   <----------DOF2<---------MYB52(1)    ---- ----->TaNAC69(2)   --------->ARR11(3)<----------DOF2----------->HVH21<---------ARR14(2) <----------DOF2   ggcaccgatttacattcctctcgatcttcagatctatacacttttaagattgcctgtgaagtctttattgagattccggtgcgcctccaagctttggtcc  17364900                                                               --------->TGA1a                                                               --------->bZIP60(2)                                                               --------->ANAC58                                                               <---------O2                                                               =========================bZIP_DOF          ------>MYB46(1)                                      ======================================          ------>MYB83                                         --------->ANAC46         --------->ANAC46                                      --------->ANAC58                   ---         --------->ANAC58                                      --------->O2                       ===         --------->ANAC58                                    <---------ALFIN1              <---------LBD16        --------->MYB46(3)                                 ------>ZmHOX2a(1)           <----------DOF2        <---------MYB55(2)                            --------->ZAT2                   ==============     <---------ALFIN1                                 --------->At4g35610    <----------DOF2  -------     --------->AtMYB61                                <---------At4g35610    ========================    --------->MYB46(3)                             ------>ZmHOX2a(1)        <---------ANAC58 --------  --------->YAB1                                  --------->TOE2(3)         <---------ANAC58--------- -->ZmHOX2a(1)                        <---------ICU4  <---------ZAT2  <---------YAB1<------ZmHOX2a(1)   tctatcaccaccagccaatatttcaaaaaacagcacttgaacattacatcttcctcagctcctccacgtcttctcattgcttttcaggactttcacggta  17365000                                                                                  <------ZmHOX2a(2)                                                                                 <---------ARR11(3)                                                                                 --------->ARR14(2)                                                                                 <---------ARR14(2)                                                                                 <---------AGP1                                                                                 --------->AGP1                                                                                --------->RVE1(1)                        >>>>>>>>>MYB98                                       ---------->DOF2                      ----------->HVH21                                 --------->TOE1(3)                     <---------MYB46(2)                                 --------->TOE2(3)                   ------>NtERF2  <---------ARR14(2)                    --------------->AGL15                  --------->DEAR3(1)     ------>ZmHOX2a(1)              <---------------AGL15                <-----------HVH21 <-----------ARR10                     <---------DAG2      <---------YAB1<------NtERF2 --------->ARR14(2)                   ----------------->AGL3 ========bZIP_DOF---------->ID1   ------->TEIL                      <---------ZAT18 ------->DOF2  --------->TGA1a --------->ANAC55(2)                 <---------ANAC58    ------->TEIL ========================bZIP_DOF <---------ARR11(1)               <---------ANAC58------>ZmHOX2a(2) ========================bZIP_DOF<---------CCA1(2)                --------------->AtSPL8    <-------- -->At5g28300  <---------O2    --------->ANAC55(1)   =====================================HOX2a_HOX2a ========================bZIP_DOF<---------ARR14(1)  ------>ZmHOX2a(1)------->TEIL--------->CCA1(2) --->GT1       <---------TGA1a <---------ANAC55(2)   ====================================HOX2a_HOX2a< >ANAC46       --------->O2    --------->ANAC46------>ZmHOX2a(1) <---------ANAC46--------->ARR11(3)--   aaaagcttatgttagtctcgtcgcctaacccatacgtatcttcctcttcctcttcctcttcttcatgttgtgtaccttataaagatctgaacgtctttaa  17365100                                      --------->At4g35610                                      <---------At4g35610                              <---------At4g35610                                     <---------ARR11(3)                                --------->At4g35610                                   ----------->ARR10                                   <------NtERF2                                  <----------DOF2                                 --------->ANAC58                                 <---------ANAC58                        --------->TOE1(3)                          --------->ARR14(2)                            --------->ZAT6 --------->ZAT2 --DOF2       <---------ZAT6     <---------ANAC58                     <-----------GT1  <---------ZAT2 ---------AHL20(2)        <---------ARR14(2)     --------->ZAT18--------->ARR14(2)--------->ANAC46 <- ------->AHL20(2)        <---------SPL7------>ZmHOX2a(2)        <---------ARR14(2)--------->ANAC58<--   aattaatgggaaactagtgtataatgcggttcggggcttgatctgcataagtagactaagtatggggatttgtaaccctagcacaaggcagcttcagttt  17365200  Previous    Next  AGI:  At3g47130.1    Description:  F-box family protein-related. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G47150.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 17364699    to: 17365836    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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