Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->ATHB51                                                               <---------ICU4                                                               --------->ATHB12                                                              --------->AHL20(2)                                                              <---------AHL20(2)                                              <-----------GT1 <---------ATHB51                                             --------->MYB46(3)-------->ATHB1                                           --------->ARR14(2) --------->ICU4                                         --------->LBD16   <---------AHL20(1)                      <---------ZAT18   ------->GAMYB      --------->AHL20(1)               --------->ANAC58        <---------LBD16     --------->AHL20(2)       --------->ALFIN1               -------->P           <---------AHL20(2) ---->YAB1     --------->ANAC58       --------->MYB52(1)  <---------AHL20(2) ----YAB1 ----------->HVH21         --------->MYB46(3)    --------->AHL20(2)   ataaatcaagtgttgacaggctagagcagttcgacagaacaaccggaatcacccctccaaataaattattgctcatgttcaaatattgaagcctgaacaa  17360900                                                       ------>ZmHOX2a(2)                    <--------                                                      <------ZmHOX2a(2)        --------->MYB52(1)                                                      --------->CCA1(2)      --------->MYB46(3)                                                     <---------AGP1         ------>MYB46(1)--------->ZAT14         ----------->HVH21     --------->DAG2        --------->AGP1         ------>MYB83   <---------ZAT14       XXXXXXXXXXXXXXXXXXXX>MIR390A/B                <---------ARR11(3)    ----------->RAV1(1)     --------->MYB46(3)       ---------->DOF2        --------->ARR11(3)   --------------->AGL15     -    ------>MYB46(1)      --------->AtLEC2        ---------->DOF2         ----------------->AGL1   <--    -------->P        <------NtERF2            <-------TEIL  --------->CCA1(2)---------->DOF2     <--    ------>MYB83     ------>NtERF2            --------->CCA1(2)          <-----------------AGL1  <---   gtttccaacctctgaagggatggcaccatggaaaaagttgtctgcaagattcaaagatctaagaaatgagaggttaccaacaaagggagagactacaccg  17361000                            --------->ARR14(2)                      <---------ALFIN1                      --------->ANAC58                      --------->ANAC46                      --------->ANAC58                    <---------ALFIN1                  --------->CCA1(2)                  ==========================HOX2a_HOX2a                 <---------ARR14(2)                 <---------ARR11(3)                  --------->ANAC55(1)                 --------->AGP1                      --------->ANAC46              <xxxxxxxxxxxxxxxxsmallRNA(i)         <---------ALFIN1             <-----------RAV1(2) -ALFIN1   ==============HOX2a_HOX2a             ----------->RAV1(1)<---------At4g35610 -------->MYB52(2)<------ZmHOX2a(2)  ------>ZmHOX2a(1)              <---------ZAT2 -------MYB52(1) --------->ARR14(2)----------->RAV1(2)              --------->ZAT2<------NtERF2 ----- ------P   ------>ZmHOX2a(1)<---------ARR14(2) ------>NtERF2        --------->At4g35610         <---- ------MYB52(1)  --------->ARR11(3)==========================RAV--------->WRKY18(1)            ------   gttagttttagtcctccaagatccacaccagttactctcctgtgtttgaggccacacttaacaccggtccagctacagagaggcagggagtcattccacg  17361100                                                                                         <---------ZAT14                                                                                    <---------ANAC58                                                                                    <---------ANAC58-                                                          <-----------GT1        <---------WOX13(1) <                                                   <---------ANAC58           <---------YAB1        <    --------->ANAC46                               <---------ANAC58       --------->WOX13(1)       <-  ----------->RAV1(1)   <---------GLK1(2)        --------->ICU4         <---------MYB52(1)   -------- -->PIF5             --------->HSFB2a(2)    --------->ANAC58           --------->LBD16   --------->ZAT14 ---PIF5             <---------HSFB2a(2)    --------->ANAC46           <-----------HVH21 <---------ZAT18 --->ANAC46    --------------->AGL15        --------->ANAC58        ------>ZmHOX2a(1)    --------->ZAT18   agcccaacacaactctacttgtttcagaaacttgagacttgaactcaagcaatgcttgtttatcagtctcctccgtcaatctgattgtttgtgcacagac  17361200                                                                                 <--------P                                                                                <---------ANAC46                                        <-------TEIL                   --------->MYB46(3)                                       --------->CCA1(2)              <---------GLK1(1)               ----------->HVH21      --------->ARR14(2)             <---------ARR14(2) -------->ARR14(2)                    <---------ARR14(2)           <---------MYB52(2) ---------ARR11(3)             ---------->DOF2                    --------->ANAC58    ---------->DOF2 ---------ARR14(2)          --------->ANAC58          --------->YAB1 --------->ARR14(2)    <--------- --------CCA1(2)            --------->ANAC58 --------->YAB1       --------->ANAC46 <------MYB83 ->DEAR3(1)  --------->ANAC55(2)--------->DAG2--------->GLK1(2)   --------->ANAC58 <------MYB46(1)   catatctgaatgttcaagtgacacagagacaagtaaagcagatacaagaatcagtctcataacaatacaaggaacccccatgggttggaaaagctttttt  17361300                                                                                 <---------AtMYB61                                                                             <------NtERF2                                                                            ------>NtERF2                                                                            <---------ERF1                                                                            <---------RAP2.3(1)                                                                           <---------ANAC46                                                                           <---------RAP2.6(2)                                                                           --------->ATERF1(2)                                                                           <---------ATERF1(2)                                                                           <---------RAP2.3(2)     --                                                                           <---------RAP2.3(3)   ----                                                                     <---------ARR14(2)          <---                                                                     --------->ARR14(2)         -----                                                                     --------->ARR11(3)         <----         --------->MYB52(1)                          --------->GLK1(2)     <---------DEAR3(1)   <----      --------->ANAC58                               --------->ICU4  --------->GLK1(2)      ---------      --------->ANAC46                            <---------TOE2(3) --------->RVE1(1)  <---------ANAC46  ------>ZmHOX2a(1)                           <-------GAMYB      --------->YAB1<----------DOF2------- --------->TOE2(3)   --------->AHL20(2)<------ZmHOX2a(1)<---------YAB1    --------->RAP2.6(3) <------ -DOF2--------->ANAC58     <----------DOF2   <---------MYB46(3) --------->AHL20(2)<---------MYB46(3)   tttcctaaacgaaacggagacaaaaaattctttcacaaccaggatgactgttgagattatgagcaaataaaaatctggcggctttggttccctatacaat  17361400      <-----------TBP   <------ZmHOX2a(1)                                                       ------>NtERF2 ------->ICU4                                    --------->YAB1      <---------ANAC58 ----->YAB1                              ---------->DOF2         <-------PIF5 ------ICU4                           --------->ANAC58           ------->PIF5                -------- ---->ICU4                        --------->ANAC46              --------->ANAC46            <-------- -----ATHB51              --------->HSFB2a(2)   <---------YAB1  --------->O2----------->RAV1(2) -----ATHB12  --------->ZAT14     --------->ANAC58--------->ARR11(3) <---------ANAC46       --------- --->CBF      <---------ZAT14     --------->ANAC58<---------ARR11(3) <---------ANAC58     <---------GLK1(2) -------->AGL15           <---------HSFB2a(2)   --------->ICU4  <---------O2--------->ATERF1(1)  ---- ---------AGL15        <----------DOF2--------->ANAC58         <---------LBD16    <---------SPL7-----   aatgaggaatatgtagtatagtagccttttagaaactcgcaaacaaagtaatgatattccaaaaccacggggcttgcagcctgcggtatgcagattattc  17361500        --------->WRKY45        --------->WRKY12        --------->WRKY38(1)        ------------>CBF    ------>ZmHOX2a(1)           ---------->DOF2                     <---------At5g28300 ->KAN4(2)            ---------->DOF2                              <-----------GT1 -KAN4(1)            <---------WRKY12                          <---------ICU4                 <------ >KAN4(1) >>>>>>>>>WRKY6   ------------>CBF                   <---------YAB1          --------->ANAC58 -------->CBF        <---------WRKY38(1)            <-----------RAV1(1)  <----------DOF2 <---------WRKY12 ---->TOE2(3)        <---------WRKY45  <---------ATHB12       --------->ICU4          --------->ANAC58   tcaatcctcgttgactattagggtcaaagtccaatagagcaatgacttattctcatgttgcctcattattcactgcttcatttcgcccaagtcaactatc  17361600                                                                                        --------->ZAT2                                                          --------->YAB1                <---------At4g35610                                                      --------->ZAT6                    <---------ZAT2                                                      --------------->AGL15    --------->YAB1                                               <---------AHL20(2) --------->MYB46(3)    --------->At4g35610                                  --------->ANAC58    <---------------AGL15<---------YAB1                                  --------->ANAC58  <-----------GT1------->GAMYB<---------AHL20(2)                             <-----------GT1   --------->AHL20(2) <---------MYB52(2)   ------->TEIL -----HVH21          <----------DOF2          <---------WOX13(1)  --------->DEAR3(1)<---------REM1(1)   agacgcttatcaaatactatatactttagttttaccaaggaaaacttgattaattaacactaatagcaacgaccattcttataaaaatgtagctgaggga  17361700                                                                                             <-------                                                                                          --------->AHL20(2)                                                                <---------AHL20(2)       --------->AHL20(2)                                                        <---------ANAC46                 <---------AHL20(2)                                                        <---------ANAC58             <---------AHL20(1)                                                        <---------ANAC58 <---------At4g35610 <-------                                                   ------>MYB83--------->AHL20(1)    --------->AHL20(2)                  ----------->HVH21                ------>MYB46(1)       --------->At4g35610 --------        --------->ARR11(3) <---------bZIP60(1)     -------->P  <---------ARR11(3)    <---------AHL20(2)        <---------ARR11(3) --------->bZIP60(1)--------->ANAC46 <---------AHL20(1)    --------->AHL20(1)   tgtttgtcaagttcttagcagtgaccatgacatcaacgatttcgatatacaccaacttgcttctatatatttctcagcaaaatacaataaaataaataat  17361800  Previous    Next  AGI:  At3g47110.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47090.1); similar to EFR (EF-TU RECEPTOR), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G20480.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23125.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83822.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41336.1); contains InterPro domain Prote Range:  from: 17358088    to: 17361281    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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