Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <----------DOF2      <---------TOE2(3)              <---------HSFC1(2)                                            <-  <----------DOF2                    --------->HSFC1(2)                                            <- -------DOF2                   ---------->DOF2                                                ------- ---->HSFC1(2)               >>>>>>>>>GATA-1                                                 <------- -----HSFC1(2)          --------->CCA1(2)                                       <---------GLK1(2)  -- -----HSFB2a(1)        --------->ARR11(3)               <---------AGP1--------->DEAR3(1)     -------- ---->HSFB2a(1)        <---------ARR11(3)      <---------ATHB12    <---------ALFIN1         ---------   tttcctttgaggtcgtttagaccaagatatagataaagaagctttctcaatgaccctagttctgaaggaacaccgtctccaagattgtttgaaaataaat  17355200         --------->GLK1(2)                                      ----------->RAV1(1)    --------->REM1(1)                                           <---------ALFIN1   <-------TEIL                                           ---------->DOF2 --------------AtSPL8                                    <---------AHL20(2) --------TOE2(3)                                         --------->AHL20(2) -->WOX13(1)                                      --------->LBD16 --------->MYB46(3) --AHL20(2)                                      --------->HSFB2a(2) ------------->AtSPL8                <---------GLK1(2)  <---------YAB1 ->AHL20(2)        --------->At4g35610        ------>ZmHOX2a(1)--------->ZAT18<---------AHL20(2) >AHL20(2)      <---------ZAT18  <---------ANAC46<---------HSFB2a(2)      --------->AHL20(2)       <-   caaggtacaacaatctagagcagttggacaaactggctggaatctctccttccagataattaaagcccacagccaaatatttaagtctaaacaagtttcc  17355300                                                                                                 ----                      ---------->DOF2                                                          <-----            --------->HSFB2a(1)                                                                ------            <---------HSFC1(2)                                                            ------>ZmHOX2a(1)            --------->HSFC1(2)                           --------->ANAC58           --------->ZAT6            <---------HSFB2a(1)                          --------->ANAC58           <-----------GT1            <------MYB83  ----------->GT1       --------->CCA1(2)                --------->bZIP60(1)            <---------MYB46(3)                --------->CCA1(2)                  <---------TGA2(1)            <------MYB46(1)                  --------->ARR11(3)                  --------->TGA2(1)           <---------AtMYB61   <---------YAB1<---------ARR11(3)                  <---------bZIP60(1) --------CCA1(2)    --------->AtMYB61   --------->WRKY18(1)                 ----------->GT1--------->ANAC46   catctcttgagggatggttccaccaaaagagttattagagaggtcaagatatatgagaaacgaaagattaccaatagatggtgatatcactcctcccaac  17355400                                                   --------->ANAC46                                                <---------MYB52(2)                                              <-----------ARR10                                             --------->REM1(1)                                           <---------ALFIN1      --------->At4g35610             ----        --------->LBD16                    ----------->RAV1(1)<---------ZAT2                     ----       <---------TOE1(1)                 ------>NtERF2<---------ALFIN1                       ------>NtERF2     ------>ZmHOX2a(1)                 <---------ANAC58------>MYB83                         ---------    --------->TOE2(2)                  <---------RAP2.6(2)    <---------At4g35610         <---------LBD16    --------->TOE1(2)                  <---------ANAC58------>MYB46(1)                    <-------MYC3 --->GAMYB                            <---------LBD16------->GAMYB                        ------->MYC3 ----ZAT2              <-----------GT1--------->At4g35610     --------->At4g35610        --------->ANAC46 --->ZAT2           ----------->GT1   <---------At4g35610     --------->ZAT2            <---------LBD16   tgcaatcctccgaggtccaaacgagtaactctcttgtgtttgcggccacatctaacccacttccagctgcagagagggaatgagttattccacgcggaca  17355500                  <---------GLK1(2)              <---------ANAC58            <----------DOF2                      <---------ANAC58           <---------ANAC58                  <---------ANAC58              ------->MYC3      <----------DOF2                        <---------ANAC58        <-----------GT1    <---------ANAC58 ----->ANAC58  --------->HSFB2a(2)      --------->MYB46(3)       --------->At5g28300    <---------ANAC58 ----->ANAC58  <---------HSFB2a(2)------>ZmHOX2a(2)             ----------->GT1         <---------AtLEC2 >LBD16    <---------ANAC58     <---------ARR11(3)       <----------DOF2   <-------MYC3 <---------ANAC46   aggcatcccttttgctttcagaaacttgagacttgatctccaacaacgcttgcctatcactttcatcggtaaaaccatatgcttcgagttgcatgagagc  17355600                                                          <------------CBF                                                        <---------AHL20(2)                                                        --------->AHL20(1)                                                        <---------AHL20(1)                                                     --------->AHL20(2)                                                  <-------GAMYB                               -------                                                 <------MYB83                                <-------           ---------->DOF2                       ----------->GT1                        --------->AHL20(2)       --------->ANAC58                          <------MYB46(1) <---------ARR14(2)   ----------->GT1       --------->ANAC58                      <-----------RAV1(1) --------->ARR14(2) <------ZmHOX2a(1)   --------->ANAC58                    <----------DOF2  --------->ARR11(3)   <----------DOF2 --------   --------->ANAC58               <----------DOF2<---------MYB46(3)    --------->HSFB2a(2)  --------- ---------->DOF2                <------------------------ANAC81<---------MYB46(3)<---------AtLEC2   <   attgaaagcaagtaaaagaaatagtctcatgcttctcttttctttttttgttggttaaaatattgtggttcttctcaaactttgcaggaagtaaatatat  17355700                                                                           --------->ARR14(2)                                                                           <---------ARR11(3)                                                                      --------->MYB52(1)                                                                      -------->P                                                                     ------->GAMYB       ------------>CBF                                             <---------MYB52(2)      --------->ANAC58                                              <---------MYB111(1)      --------->ANAC58                                              <---------MYB55(2) --------->CCA1(2)                                                  --------->MYB46(3) -->CCA1(2)                           --------->ANAC46              <---------MYB111(2) --AHL20(1)                           --------->ANAC58        --------->YAB1 ->AHL20(1)                           --------->ANAC58      <---------KAN4(2) >AHL20(2)<------------CBF          --------->MYB52(1)    <------ZmHOX2a(1)<---------GLK1(2) ----------ID1                  <---------ZAT6---------->DOF2--------->ICU4<---------ARR14(2)   aagagacgaagcaattgcaaaatgcctacttgtagtgctaacgcaacttgaagccaaataggaatgatcaactaccagatttttccaaaatataagtcaa  17355800                                                                                                -----                                                                                           <---------               <----------ID1                                                      <---------ANAC58             ---------->DOF2                                                       <---------ANAC58        ----------------->AGL1                                                     <---------ANAC46      ------->GAMYB --------->ANAC58                                              <------NtERF2 <----     --------->MYB46(3)                                                          <---------MYB46(3)    --------->At4g35610                                                          --------->MYB55(2)    <---------At4g35610            <-------TEIL    <----------DOF2              <---------RAP2.6(2)  <---------WRKY12  --------->ANAC58       <-----------GT1 <----------DOF2   <---------AtMYB61  <----  <---------WRKY38(1)    --------->ICU4   --------->AHL20(2)                 --------->ALFIN1  <-----   gaagtcaactgcctaaaaagacaaggaaagattaagatgcgcatttaactagtctttctgacttttctataggcatcatgtggtggctggatttatcggt  17355900                      --------->AHL20(2)                                                    <--------                      <---------AHL20(2)                 --------->ZAT14                    <--------                      --------->AHL20(1)               --------->ANAC55(1)            --------->ZAT6                      <---------AHL20(1)               --------->ANAC46            --------->ANAC46       <---------HSFB2a(2)                             --------->ANAC58          --------->ANAC58 <-- ---->PCF2<---------GLK1(2)                            --------->O2              --------->ANAC46 --- --GT1 --------->HSFB2a(2)                             --------->TGA1a         --------->AtMYB61<---- -----TCP15(1)   ------------>CBF                      --------->ANAC58---------->ID1--------->ZAT14 -----TCP20--------->GLK1(2)--------->At4g35610<---------YAB1     <----------DOF2--------->ANAC58---- ------HVH21--------->At4g35610    <---------AtLEC2    ======================bZIP_DOF<---------ZAT14   cccatatgtctggaatctgaacaattaattagcttaagcatggaacattactatcacacggcagtcatcttttgtcttaaaccacacaacactactttat  17356000     <---------At4g35610            <---------ANAC58 -DAG2   --------->MYB46(3)         <---------ANAC46 --DOF2 -------->P             --------->ATHB12                                                    -- -------ARR11(3)            <----------DOF2                                                 <-------- ------>ARR11(3)       --------->ANAC58         --------->REM1(2)                        <---------ANAC58 -----YAB1             --------->ANAC58      <----------DOF2                      --------->MYB46(3) ----->YAB1       ----------->HVH21 <---------ANAC58  <------ZmHOX2a(1)--------->ZAT14   <---------ANAC58   gatattgagcaaccatacatgtgacaagccctttcattgcttgcaaactttgtagaggaaaccaaaaaaacacttcagcctcgaaccaatagcttgagcg  17356100  Previous    Next  AGI:  At3g47090.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47570.1); similar to EFR (EF-TU RECEPTOR), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G20480.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23125.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63094.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48528.1); contains InterPro domain Prote Range:  from: 17352497    to: 17355630    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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