Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->ANAC58                                                                     --------->DEAR3(1)                                                                     ----------->HVH21                                                                   ------>ZmHOX2a(1)                                                              ------>ZmHOX2a(2)                                                             =============HOX2a_HOX2a                                                             <------ZmHOX2a(2)                                                            <---------GLK1(2)                                            --------->HSFB2a(1) ------>ZmHOX2a(1)                                           <---------TOE1(3)<---------ARR14(3)                                           <---------TOE1(2)--------->ARR11(3)                               --------->LBD16              <---------ARR11(3)                     <---------GLK1(2)     <---------TOE2(2)<---------ARR14(2)                 <---------LBD16    <---------HSFC1(2)      --------->ARR14(2)       --------->LBD16     ------>ZmHOX2a(2)         <---------HSFB2a(2)          --------->ARR14(3)      --------->DEAR3(1) ---->ATHB12--------->HSFC1(2) --------->HSFB2a(2)      ---------->DOF2 --------->ANAC58       ------ ->ANAC55(2)<---------HSFC1(2)<---------ANAC46       --------->TOE2(3)------>NtERF2<---------LBD16   atttagatcggtgaagtttcccagattgtgttccgagaaacgtcgaaggttttaatctcaaagatcctcctccgacggaaacatcaccggctattccacg  17351000                                                                <---------ANAC58    <---------O2                                                   <---------ARR14(2)               <---------bZIP60(1)                                                   --------->ARR14(2)----------->HVH21    <---------MYB46(3)       <---------ANAC46                <---------ANAC46         <---------ANAC58    --------->bZIP60(1)      <------NtERF2                  --------->MYB52(1)    --------->ALFIN1         --------->O2     ------>NtERF2         <XXXXXXXXXXXXXXXXXXXXMIR4239    <---------ANAC46 <---------ATHB12    <---------DEAR3(1) <---------TOE2(3)          <------ZmHOX2a(1)  ------>ZmHOX2a(1)  <-------GAMYB --->ANAC46            <---------TOE1(3)        <---------TOE2(3)<---------SPL7 --------->DEAR3(2) <-   agaacgacggcgtttagatgaagttagggtttgcgaaaatgacggacattgaggaatcgctgtgtgtcgtcctgaccaatgaaacgacgtcgttgttgct  17351100                        --------->ANAC58                        --------->ANAC46                          --------->YAB1                        --------->ANAC58 <---------ARR14(2)       ---------->DOF2                 --------->At4g35610     --------->ARR14(2) --------->ANAC58           --------->ATHB51              --------->GLK1(2)  --------->ANAC58           <---------ICU4   --------->ANAC58          <---------HSFB2a(2)                          --          <---------MYB52(1)--------->ANAC58         ----------->GT1--------->ICU4  --------->ATHB12 ---------DOF2   <---------At4g35610    <---------GLK1(2) ---------->DOF2 <----------ID1 <---------ANAC55(2)   actttcacttccattattccgatgaaacgcaaacaaatctcagaatctgtataaatcgagaaaagctataaagattaagacaaaattgattacgagaaat  17351200                                                                                <---------GLK1(2)                                                                                --------->ARR11(3)                                                                    <-------GAMYB             -------                                                                   --------->MYB52(2)    --------->LBD16                                                                   <---------MYB46(3)  <---------LBD16                                   <---------At4g35610           <---------MYB52(1)   <---------LBD16    --------->CCA1(2)   ---------->DOF2             <---------MYB46(3)          <---------ARR11(3) -------->DOF2 --------->YAB1      --------->At4g35610        <-------TEIL     <---------RVE1(1)<----   tgaaagataagagagaatgagaatgagaaagagagagagcttacttcttcttggtgattcgaaattcgttcgttgagagagagattttctcgggagaatt  17351300             --------->At4g35610               ------>ZmHOX2a(1)             ----------->GT1                   --------->LBD16             <---------At4g35610             ----------->RAV1(2)                 *TSS            >>>>>>>GRF7                   <---------GLK1(1)                     >>>>>>>>>TBF1         <-----------HVH21                --------->GLK1(1)                  ------------------------        <---------MYB46(3)                <---------At4g35610                >>>>>>>>>TBF1  <---------AtLEC2               <---------ANAC58                         >>>>>>>>>TBF1  ---------->DOF2 -->GLK1(2) --------->MYB59  <---------At4g35610                       >>>>>>>>>TBF1<----------ID1 -----AHL20(2)<-----------HVH21  <---------ANAC58   <----------DOF2  ------------------------>ANAC81   ttttgtatggttgtcaggtcaaatcgaattcagaggcttacgagagctcctgaactttgttagaaacagagaagaagaagaagaagaagacaaaagccct  17351400                                                                          ------->MYC3                                                                          <-------MYC2                                                                          ------->MYC2                                                                          ------->PIF4                                                                          <-------MYC3                                                                          <-------PIF5                                                 <---------LBD16          ------->PIF5                                                --------->MYB52(1)        <-------PIF4                                               <-----------GT1           <---------ANAC46                                           <---------AHL20(2)            <------NtERF2                                           --------->AHL20(2)            --------->ATERF1(1)                                          <---------AHL20(1)             <---------ANAC58                                          --------->AHL20(2)             <---------ANAC58                                      <---------AHL20(2)                ------>NtERF2                                      --------->AHL20(2)      --------->At5g28300                                     --------->AHL20(2)       <------NtERF2                                  --------->AHL20(2)         ----------->GT1                                  <---------AHL20(2)  --------->CCA1(2)<---------ANAC58                                 <---------AHL20(1)  <---------ARR14(2)<---------ANAC58                                 --------->AHL20(2)  --------->ARR14(2)<---------ANAC46     <-----------TBP          <---------AHL20(2)<---------At5g28300 --------->DAG2     --------->AHL20(2)    ----------->GT1<---------AHL20(2)<---------DEAR3(1)                  <---- >ANAC81          ----------->GT1<---------AHL20(2)--------->LBD16---------->DOF2               <----   tgtatgtttatataccaagagagaaaaattagtaaattatttaattaatttaccggatataggcggtgaaaaggcgcgtgctattttagagaagagattg  17351500                                                   --------->ARR14(2)                                                   <---------GLK1(2)                                                   <---------ARR14(2)                                            --------->YAB1                         --------->LBD16                            <-------GAMYB <---------WOX13(1)                     <---------LBD16                     ----------->ARR10 <---------YAB1                           <---------LBD16                    <--------P    <---------At4g35610                    ----------->GT1     --------->AHL20(2)     --------->At5g28300   <------ZmHOX2a(1)    ------>NtERF2           <-----     <---------AHL20(2) ------------>MYB.PH3(1) <---------TOE2(3)     <---------ANAC46        <------    <---------AHL20(2)  ------------>AtMYB77--------->ATHB12    --------->MYB52(1)<---------HSFB2a(2) --MYB83 <---------AHL20(2) <-----------HVH21   <---------TOE1(3)  ----------->HVH21          <------ --MYB46(1)    <---------LBD16  <-----------RAV1(2)--------->ARR11(1) <---------O2--------->HSFB2a(2)   gttttatttatttattccacgggtagagacggttacaggtgatgaatgataaggattcggctaaactaagcgacgcggtttattcgggaaaattttgctt  17351600                                                   <--------P                                                   ========================================MYC_MYB                                                  <---------ANAC58                                                  =========================================MYC_MYB                                                  <---------ANAC58                                                  <-------GAMYB                                                 <---------MYB46(3)                                                 --------->MYB52(2)                                                 <------MYB46(1)                                                 --------->MYB55(2)                                                 <------MYB83                                                <---------AtMYB61                                               <--------P                                               ============================================MYC_MYB                                             --------->ALFIN1                                            ------->MYC2                                            ------->MYC3                                            <-------MYC3                                            <-------MYC2                                           ===============MYC_MYB                                           =============MYC_MYB                                           =============MYC_MYB                          <---------ANAC46 <---------ANAC46                               <--------P                        --------->MYB52(1) <---------ANAC58                             <---------MYB46(3)                     --------->At4g35610   --------->TGA1a                         --------->ALFIN1                     <---------At4g35610   <---------TGA1a                       --------->ANAC58       <----------DOF2 ----------->HVH21   <---------O2                          --------->O2       ==============================================bZIP_DOF                    <---------O2     <------NtERF2  <---------ARR11(3)     --------->O2                          ==================MYC_MYB   <---------RAP2.6(2)------>ZmHOX2a(2)    <---------ANAC55(2)                   --------->TGA1a  <---------LBD16   <---------AGP1         <---------ANAC55(1)                   --------->ANAC58 -----DOF2      ------>ZmHOX2a(2)          --------->ANAC55(2)                   ================MYC_MYB ---ANAC58    <---------ARR11(3)           <---------ANAC58                      <---------TGA1a ---- ---ANAC58    --------->ARR11(3)       ------->TEIL<---------WOX13(1)   ------>ZmHOX2a(2)<-------GAMYB   tcatcgcggcttcatcgatcttgatctgacggatgagaatgaatcacgtgttggttgatatagcttcggtttgatctattgccacgtagggggttgaaga  17351700                     ------>MYB46(1)                     ------>MYB83                     --------->MYB52(1)                    --------->MYB55(1)                    ----------->HVH21                   <---------MYB52(2)                   <---------MYB46(2)                   <---------MYB111(1)                   <---------MYB59                  ----------------->AGL1                 ------->TEIL                            <---------ZAT6              --------->ANAC58                         <---------ANAC58                         -----              --------->ANAC58                         <---------ANAC46                   --------->LBD16              --------->ANAC46                         <---------ANAC58            --------->AHL20(2)             <---------LBD16--------->ZAT18   --------->HSFB2a(2)             --------->HSFB2a(2) ---           <-------TEIL    <------ZmHOX2a(1)  <---------HSFB2a(2)          <-----------GT1------>ZmHOX2a(1) ----->GLK1(2)--------->ANAC55(2)            <-----------GT1  <---------YAB1 <-----------GT1    -----   atatggagatgggttcacggacctaacgaggacacaaacttgggttttctcgatattgagtgttatgaaatttgtattttctcgatttattcctgaaaac  17351800                                                                                                <----           --------->AHL20(2)                                                              ----------         ----------->GT1                                                              <---------HSFB2a(2)       ---------->DOF2           <---------GLK1(2)                                <---------RVE1(1)    <---------YAB1             ----------->ARR10      --------->ARR11(3)         <---------GLK1(2) ---->ANAC58      <---------ANAC58                  ----------->ARR10            --------->ARR11(3) ------->DOF2     <---------ANAC58                  <---------TOE2(3)   --------->YAB1--------->HSFB2a(2) ---->ANAC58      <---------ANAC46              --------->YAB1 <-----------GT1--------->YAB1---------   gaaagtatgaaaagaaaatagcttgttttagagtagattatctcattctctaataagatttgttttaacaaaaattagaatcagatttttagaaaaagct  17351900  Previous    Next  AGI:  At3g47080.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT2G29670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21490.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 17349091    to: 17351381    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version